Gene annotation
Transcriptome id Sobic.001G242800.1
Synonym Sb01g021470
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt C5X1F2
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF216
NCBI CDD KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60690 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os10g28320.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006881
Brachypodium KQJ96743 , KQJ96741 , KQJ96745 , PNT67390 , PNT67392
Barley HORVU7Hr1G039930.1 , HORVU7Hr1G039930.3 , HORVU7Hr1G039930.7 , HORVU7Hr1G039930.6
Wheat TraesCS7D02G197100 , TraesCS7B02G101300 , TraesCS7A02G195600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G392800 thymidylate kinase, putative, expressed K00943: tmk, dTMP kinase
2 Sobic.002G319200 expressed protein K11490: condensin-2 complex subunit H2
3 Sobic.004G152200 glycosyltransferase, putative, expressed -
4 Sobic.008G004100 phosphatidate cytidylyltransferase, putative, expressed K15892: farnesol kinase
5 Sobic.001G112700 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II
6 Sobic.009G126500 methyltransferase, putative, expressed -
7 Sobic.001G432300 imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed K01663: imidazole glycerol-phosphate synthase
8 Sobic.009G151700 protein of unknown function DUF502 domain containing protein, expressed -
9 Sobic.006G177300 ATFUC1, putative, expressed K01206: alpha-L-fucosidase
10 Sobic.003G445000 pectinacetylesterase domain containing protein, expressed -
11 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
12 Sobic.003G345200 protein kinase family protein, putative, expressed -
13 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
14 Sobic.001G040300 expressed protein -
15 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
16 Sobic.008G129300 CPuORF5 - conserved peptide uORF-containing transcript, expressed -
17 Sobic.002G280700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
18 Sobic.001G528600 remorin family protein, putative, expressed -
19 Sobic.002G143000 ubiquitin family protein, putative, expressed -
20 Sobic.010G050200 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -


Gene co-expression network
sample Sobic001G242800 Sobic001G242800 Sobic002G392800 Sobic002G392800 Sobic001G242800--Sobic002G392800 Sobic002G319200 Sobic002G319200 Sobic001G242800--Sobic002G319200 Sobic004G152200 Sobic004G152200 Sobic001G242800--Sobic004G152200 Sobic008G004100 Sobic008G004100 Sobic001G242800--Sobic008G004100 Sobic001G112700 Sobic001G112700 Sobic001G242800--Sobic001G112700 Sobic009G126500 Sobic009G126500 Sobic001G242800--Sobic009G126500 Sobic001G432300 Sobic001G432300 Sobic001G242800--Sobic001G432300 Sobic009G151700 Sobic009G151700 Sobic001G242800--Sobic009G151700 Sobic006G177300 Sobic006G177300 Sobic001G242800--Sobic006G177300 Sobic002G392800--Sobic001G242800 Sobic002G392800--Sobic001G112700 Sobic002G392800--Sobic008G004100 Sobic003G160900 Sobic003G160900 Sobic002G392800--Sobic003G160900 Sobic010G080500 Sobic010G080500 Sobic002G392800--Sobic010G080500 Sobic006G002700 Sobic006G002700 Sobic002G392800--Sobic006G002700 Sobic009G238900 Sobic009G238900 Sobic002G392800--Sobic009G238900 Sobic009G117000 Sobic009G117000 Sobic002G392800--Sobic009G117000 Sobic008G132700 Sobic008G132700 Sobic002G392800--Sobic008G132700 Sobic002G045100 Sobic002G045100 Sobic002G319200--Sobic002G045100 Sobic002G319200--Sobic001G242800 Sobic001G371100 Sobic001G371100 Sobic002G319200--Sobic001G371100 Sobic005G211200 Sobic005G211200 Sobic002G319200--Sobic005G211200 Sobic010G032700 Sobic010G032700 Sobic002G319200--Sobic010G032700 Sobic001G528600 Sobic001G528600 Sobic002G319200--Sobic001G528600 Sobic002G319200--Sobic004G152200 Sobic002G319200--Sobic009G126500 Sobic002G161700 Sobic002G161700 Sobic002G319200--Sobic002G161700 Sobic004G152200--Sobic001G528600 Sobic004G152200--Sobic001G242800 Sobic002G393200 Sobic002G393200 Sobic004G152200--Sobic002G393200 Sobic004G152200--Sobic002G319200 Sobic007G113300 Sobic007G113300 Sobic004G152200--Sobic007G113300 Sobic002G034301 Sobic002G034301 Sobic004G152200--Sobic002G034301 Sobic004G286700 Sobic004G286700 Sobic004G152200--Sobic004G286700 Sobic009G206500 Sobic009G206500 Sobic004G152200--Sobic009G206500 Sobic004G119700 Sobic004G119700 Sobic004G152200--Sobic004G119700 Sobic008G004100--Sobic002G392800 Sobic008G004100--Sobic001G242800 Sobic009G213600 Sobic009G213600 Sobic008G004100--Sobic009G213600 Sobic006G230300 Sobic006G230300 Sobic008G004100--Sobic006G230300 Sobic009G102300 Sobic009G102300 Sobic008G004100--Sobic009G102300 Sobic004G161900 Sobic004G161900 Sobic008G004100--Sobic004G161900 Sobic010G218300 Sobic010G218300 Sobic008G004100--Sobic010G218300 Sobic002G280700 Sobic002G280700 Sobic008G004100--Sobic002G280700 Sobic001G476300 Sobic001G476300 Sobic008G004100--Sobic001G476300 Sobic001G112700--Sobic002G392800 Sobic001G112700--Sobic001G242800 Sobic002G353000 Sobic002G353000 Sobic001G112700--Sobic002G353000 Sobic001G112700--Sobic006G002700 Sobic001G096100 Sobic001G096100 Sobic001G112700--Sobic001G096100 Sobic002G309400 Sobic002G309400 Sobic001G112700--Sobic002G309400 Sobic003G290000 Sobic003G290000 Sobic001G112700--Sobic003G290000 Sobic001G112700--Sobic009G126500 Sobic010G060600 Sobic010G060600 Sobic001G112700--Sobic010G060600 Sobic009G126500--Sobic001G242800 Sobic009G126500--Sobic002G319200 Sobic009G126500--Sobic002G309400 Sobic009G126500--Sobic009G238900 Sobic009G126500--Sobic001G112700 Sobic009G126500--Sobic002G392800 Sobic009G126500--Sobic010G218300 Sobic009G126500--Sobic005G211200 Sobic007G183800 Sobic007G183800 Sobic009G126500--Sobic007G183800 Sobic008G083400 Sobic008G083400 Sobic001G432300--Sobic008G083400 Sobic003G130600 Sobic003G130600 Sobic001G432300--Sobic003G130600 Sobic004G249300 Sobic004G249300 Sobic001G432300--Sobic004G249300 Sobic001G432300--Sobic001G242800 Sobic008G156300 Sobic008G156300 Sobic001G432300--Sobic008G156300 Sobic004G326600 Sobic004G326600 Sobic001G432300--Sobic004G326600 Sobic001G432300--Sobic002G392800 Sobic001G228200 Sobic001G228200 Sobic001G432300--Sobic001G228200 Sobic008G191500 Sobic008G191500 Sobic001G432300--Sobic008G191500 Sobic006G267500 Sobic006G267500 Sobic009G151700--Sobic006G267500 Sobic009G151700--Sobic009G206500 Sobic003G345200 Sobic003G345200 Sobic009G151700--Sobic003G345200 Sobic007G139500 Sobic007G139500 Sobic009G151700--Sobic007G139500 Sobic009G246700 Sobic009G246700 Sobic009G151700--Sobic009G246700 Sobic007G040301 Sobic007G040301 Sobic009G151700--Sobic007G040301 Sobic009G061000 Sobic009G061000 Sobic009G151700--Sobic009G061000 Sobic009G151700--Sobic002G161700 Sobic009G119700 Sobic009G119700 Sobic009G151700--Sobic009G119700 Sobic006G000600 Sobic006G000600 Sobic006G177300--Sobic006G000600 Sobic001G057200 Sobic001G057200 Sobic006G177300--Sobic001G057200 Sobic001G366800 Sobic001G366800 Sobic006G177300--Sobic001G366800 Sobic006G177300--Sobic001G242800 Sobic002G143000 Sobic002G143000 Sobic006G177300--Sobic002G143000 Sobic002G259400 Sobic002G259400 Sobic006G177300--Sobic002G259400 Sobic006G179700 Sobic006G179700 Sobic006G177300--Sobic006G179700 Sobic003G376400 Sobic003G376400 Sobic006G177300--Sobic003G376400 Sobic001G322000 Sobic001G322000 Sobic006G177300--Sobic001G322000
Octagon: transcription factors


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