Gene annotation
Transcriptome id Sobic.009G229300.4,Sobic.009G229300.3,Sobic.009G229300.2,Sobic.009G229300.1
Synonym I9H, Sb09g028220, IRX9-L
Functional annotation glycosyltransferase family 43 protein, putative, expressed
UniProt C5YVH2
Pfam PF03360
Panther DB PTHR10896 PTHR10896:SF31
NCBI CDD KOG1476; Beta-1,3-glucuronyltransferase B3GAT1/SQV-8
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015018galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G27600 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os05g48600.1 : glycosyltransferase family 43 protein, putative, expressed
MaizeGDB (Corn) Zm00025a036579 , Zm00025a044535 , Zm00025a034187 , Zm00025a024090 , Zm00025a036868
Brachypodium KQK04923 , KQK04924 , KQK09166 , KQK09167
Barley HORVU1Hr1G086270.2 , HORVU1Hr1G086270.1
Wheat TraesCS3B02G304000 , TraesCS3B02G304000 , TraesCS1B02G419100 , TraesCS1B02G419100 , TraesCS1A02G391000 , TraesCS1D02G399000 , TraesCS1D02G399000 , TraesCS3A02G270100
Populus -


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cDNA sequences
Sobic.009G229300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G003600 PMR5, putative, expressed -
2 Sobic.001G512000 cyclin-dependent kinase inhibitor, putative, expressed -
3 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
4 Sobic.003G052400 proline-rich family protein, putative, expressed -
5 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
6 Sobic.001G237500 transporter family protein, putative, expressed -
7 Sobic.002G131900 expressed protein -
8 Sobic.004G337900 ENTH domain containing protein, expressed K12471: epsin
9 Sobic.002G362900 IBS1, putative, expressed -
10 Sobic.001G105100 neighbor of COX4, putative, expressed -
11 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
12 Sobic.009G179200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
13 Sobic.008G188700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
14 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
15 Sobic.004G051300 galactosyltransferase, putative, expressed -
16 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
17 Sobic.001G416600 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
18 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
19 Sobic.001G112700 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II
20 Sobic.004G134100 glycosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic009G229300 Sobic009G229300 Sobic008G003600 Sobic008G003600 Sobic009G229300--Sobic008G003600 Sobic001G512000 Sobic001G512000 Sobic009G229300--Sobic001G512000 Sobic001G230100 Sobic001G230100 Sobic009G229300--Sobic001G230100 Sobic003G052400 Sobic003G052400 Sobic009G229300--Sobic003G052400 Sobic010G105600 Sobic010G105600 Sobic009G229300--Sobic010G105600 Sobic001G237500 Sobic001G237500 Sobic009G229300--Sobic001G237500 Sobic002G131900 Sobic002G131900 Sobic009G229300--Sobic002G131900 Sobic004G337900 Sobic004G337900 Sobic009G229300--Sobic004G337900 Sobic002G362900 Sobic002G362900 Sobic009G229300--Sobic002G362900 Sobic008G003600--Sobic003G052400 Sobic008G003600--Sobic009G229300 Sobic001G145500 Sobic001G145500 Sobic008G003600--Sobic001G145500 Sobic010G008100 Sobic010G008100 Sobic008G003600--Sobic010G008100 Sobic006G034800 Sobic006G034800 Sobic008G003600--Sobic006G034800 Sobic002G342500 Sobic002G342500 Sobic008G003600--Sobic002G342500 Sobic001G408100 Sobic001G408100 Sobic008G003600--Sobic001G408100 Sobic003G030800 Sobic003G030800 Sobic008G003600--Sobic003G030800 Sobic009G168000 Sobic009G168000 Sobic008G003600--Sobic009G168000 Sobic001G512000--Sobic009G229300 Sobic004G051300 Sobic004G051300 Sobic001G512000--Sobic004G051300 Sobic001G112700 Sobic001G112700 Sobic001G512000--Sobic001G112700 Sobic005G017300 Sobic005G017300 Sobic001G512000--Sobic005G017300 Sobic004G272200 Sobic004G272200 Sobic001G512000--Sobic004G272200 Sobic001G512000--Sobic001G230100 Sobic009G026200 Sobic009G026200 Sobic001G512000--Sobic009G026200 Sobic004G134100 Sobic004G134100 Sobic001G512000--Sobic004G134100 Sobic001G007600 Sobic001G007600 Sobic001G512000--Sobic001G007600 Sobic001G338400 Sobic001G338400 Sobic001G230100--Sobic001G338400 Sobic001G110400 Sobic001G110400 Sobic001G230100--Sobic001G110400 Sobic003G348800 Sobic003G348800 Sobic001G230100--Sobic003G348800 Sobic001G230100--Sobic001G007600 Sobic008G088830 Sobic008G088830 Sobic001G230100--Sobic008G088830 Sobic001G230100--Sobic009G229300 Sobic001G281900 Sobic001G281900 Sobic001G230100--Sobic001G281900 Sobic009G104000 Sobic009G104000 Sobic001G230100--Sobic009G104000 Sobic004G082900 Sobic004G082900 Sobic001G230100--Sobic004G082900 Sobic010G017000 Sobic010G017000 Sobic003G052400--Sobic010G017000 Sobic003G052400--Sobic001G408100 Sobic002G348600 Sobic002G348600 Sobic003G052400--Sobic002G348600 Sobic001G067900 Sobic001G067900 Sobic003G052400--Sobic001G067900 Sobic003G052400--Sobic008G003600 Sobic003G217100 Sobic003G217100 Sobic003G052400--Sobic003G217100 Sobic009G160200 Sobic009G160200 Sobic003G052400--Sobic009G160200 Sobic006G257001 Sobic006G257001 Sobic003G052400--Sobic006G257001 Sobic003G052400--Sobic001G237500 Sobic010G105600--Sobic001G237500 Sobic001G105100 Sobic001G105100 Sobic010G105600--Sobic001G105100 Sobic003G405700 Sobic003G405700 Sobic010G105600--Sobic003G405700 Sobic010G105600--Sobic001G067900 Sobic003G400100 Sobic003G400100 Sobic010G105600--Sobic003G400100 Sobic010G105600--Sobic006G257001 Sobic002G272600 Sobic002G272600 Sobic010G105600--Sobic002G272600 Sobic001G061700 Sobic001G061700 Sobic010G105600--Sobic001G061700 Sobic010G105600--Sobic006G034800 Sobic001G237500--Sobic010G105600 Sobic001G237500--Sobic006G257001 Sobic001G237500--Sobic001G105100 Sobic001G237500--Sobic001G067900 Sobic001G237500--Sobic003G217100 Sobic004G222600 Sobic004G222600 Sobic001G237500--Sobic004G222600 Sobic001G237500--Sobic002G131900 Sobic001G237500--Sobic003G052400 Sobic004G132300 Sobic004G132300 Sobic001G237500--Sobic004G132300 Sobic002G131900--Sobic006G257001 Sobic002G131900--Sobic003G400100 Sobic004G274400 Sobic004G274400 Sobic002G131900--Sobic004G274400 Sobic002G131900--Sobic001G237500 Sobic002G131900--Sobic010G105600 Sobic002G131900--Sobic001G067900 Sobic002G131900--Sobic006G034800 Sobic002G131900--Sobic003G052400 Sobic004G072800 Sobic004G072800 Sobic002G131900--Sobic004G072800 Sobic003G353400 Sobic003G353400 Sobic004G337900--Sobic003G353400 Sobic001G450800 Sobic001G450800 Sobic004G337900--Sobic001G450800 Sobic003G361300 Sobic003G361300 Sobic004G337900--Sobic003G361300 Sobic003G278700 Sobic003G278700 Sobic004G337900--Sobic003G278700 Sobic003G198200 Sobic003G198200 Sobic004G337900--Sobic003G198200 Sobic003G198150 Sobic003G198150 Sobic004G337900--Sobic003G198150 Sobic001G157400 Sobic001G157400 Sobic004G337900--Sobic001G157400 Sobic004G337900--Sobic009G229300 Sobic009G099000 Sobic009G099000 Sobic004G337900--Sobic009G099000 Sobic007G188100 Sobic007G188100 Sobic002G362900--Sobic007G188100 Sobic006G087900 Sobic006G087900 Sobic002G362900--Sobic006G087900 Sobic009G220200 Sobic009G220200 Sobic002G362900--Sobic009G220200 Sobic009G208800 Sobic009G208800 Sobic002G362900--Sobic009G208800 Sobic004G145200 Sobic004G145200 Sobic002G362900--Sobic004G145200 Sobic005G231700 Sobic005G231700 Sobic002G362900--Sobic005G231700 Sobic008G016900 Sobic008G016900 Sobic002G362900--Sobic008G016900 Sobic010G228000 Sobic010G228000 Sobic002G362900--Sobic010G228000 Sobic001G409900 Sobic001G409900 Sobic002G362900--Sobic001G409900
Octagon: transcription factors


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