Gene annotation
Transcriptome id Sobic.001G512000.1
Synonym KRP3, ICK6, Sb01g047750
Functional annotation cyclin-dependent kinase inhibitor, putative, expressed
UniProt Q1KSC3
Pfam PF02234
Panther DB PTHR10265 PTHR10265:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007050; cell cycle arrest GO:0005634nucleus GO:0004861cyclin-dependent protein serine/threonine kinase inhibitor activity


Orthologs (automatic annotation)
TAIR AT5G48820 : inhibitor/interactor with cyclin-dependent kinase
RAP-DB (Rice) LOC_Os03g04490.1 : cyclin-dependent kinase inhibitor, putative, expressed
MaizeGDB (Corn) Zm00025a053386 , Zm00025a000532
Brachypodium -
Barley -
Wheat TraesCS4B02G337000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G229300 glycosyltransferase family 43 protein, putative, expressed -
2 Sobic.004G051300 galactosyltransferase, putative, expressed -
3 Sobic.001G112700 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II
4 Sobic.005G017300 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
5 Sobic.004G272200 secretory carrier-associated membrane protein, putative, expressed -
6 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
7 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
8 Sobic.004G134100 glycosyltransferase, putative, expressed -
9 Sobic.001G007600 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
10 Sobic.008G003600 PMR5, putative, expressed -
11 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
12 Sobic.002G309400 -(PubMedID : 26976818)@NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed K00028: malate dehydrogenase (decarboxylating)
13 Sobic.009G104000 ranBP1 domain containing protein, expressed K15306: Ran-binding protein 1
14 Sobic.003G030800 prenylated rab acceptor, putative, expressed -
15 Sobic.002G033400 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
16 Sobic.002G320800 expressed protein -
17 Sobic.003G181600 early-responsive to dehydration protein-related, putative, expressed -
18 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
19 Sobic.003G052400 proline-rich family protein, putative, expressed -
20 Sobic.003G410500 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase


Gene co-expression network
sample Sobic001G512000 Sobic001G512000 Sobic009G229300 Sobic009G229300 Sobic001G512000--Sobic009G229300 Sobic004G051300 Sobic004G051300 Sobic001G512000--Sobic004G051300 Sobic001G112700 Sobic001G112700 Sobic001G512000--Sobic001G112700 Sobic005G017300 Sobic005G017300 Sobic001G512000--Sobic005G017300 Sobic004G272200 Sobic004G272200 Sobic001G512000--Sobic004G272200 Sobic001G230100 Sobic001G230100 Sobic001G512000--Sobic001G230100 Sobic009G026200 Sobic009G026200 Sobic001G512000--Sobic009G026200 Sobic004G134100 Sobic004G134100 Sobic001G512000--Sobic004G134100 Sobic001G007600 Sobic001G007600 Sobic001G512000--Sobic001G007600 Sobic008G003600 Sobic008G003600 Sobic009G229300--Sobic008G003600 Sobic009G229300--Sobic001G512000 Sobic009G229300--Sobic001G230100 Sobic003G052400 Sobic003G052400 Sobic009G229300--Sobic003G052400 Sobic010G105600 Sobic010G105600 Sobic009G229300--Sobic010G105600 Sobic001G237500 Sobic001G237500 Sobic009G229300--Sobic001G237500 Sobic002G131900 Sobic002G131900 Sobic009G229300--Sobic002G131900 Sobic004G337900 Sobic004G337900 Sobic009G229300--Sobic004G337900 Sobic002G362900 Sobic002G362900 Sobic009G229300--Sobic002G362900 Sobic001G099100 Sobic001G099100 Sobic004G051300--Sobic001G099100 Sobic002G118700 Sobic002G118700 Sobic004G051300--Sobic002G118700 Sobic009G125900 Sobic009G125900 Sobic004G051300--Sobic009G125900 Sobic002G075500 Sobic002G075500 Sobic004G051300--Sobic002G075500 Sobic009G026101 Sobic009G026101 Sobic004G051300--Sobic009G026101 Sobic002G276600 Sobic002G276600 Sobic004G051300--Sobic002G276600 Sobic009G079100 Sobic009G079100 Sobic004G051300--Sobic009G079100 Sobic010G090500 Sobic010G090500 Sobic004G051300--Sobic010G090500 Sobic009G063400 Sobic009G063400 Sobic004G051300--Sobic009G063400 Sobic002G392800 Sobic002G392800 Sobic001G112700--Sobic002G392800 Sobic001G242800 Sobic001G242800 Sobic001G112700--Sobic001G242800 Sobic002G353000 Sobic002G353000 Sobic001G112700--Sobic002G353000 Sobic006G002700 Sobic006G002700 Sobic001G112700--Sobic006G002700 Sobic001G096100 Sobic001G096100 Sobic001G112700--Sobic001G096100 Sobic002G309400 Sobic002G309400 Sobic001G112700--Sobic002G309400 Sobic003G290000 Sobic003G290000 Sobic001G112700--Sobic003G290000 Sobic009G126500 Sobic009G126500 Sobic001G112700--Sobic009G126500 Sobic010G060600 Sobic010G060600 Sobic001G112700--Sobic010G060600 Sobic004G138800 Sobic004G138800 Sobic005G017300--Sobic004G138800 Sobic009G182300 Sobic009G182300 Sobic005G017300--Sobic009G182300 Sobic005G017300--Sobic001G007600 Sobic005G017300--Sobic001G096100 Sobic005G017300--Sobic002G309400 Sobic002G060900 Sobic002G060900 Sobic005G017300--Sobic002G060900 Sobic005G017300--Sobic003G290000 Sobic009G067000 Sobic009G067000 Sobic005G017300--Sobic009G067000 Sobic007G092100 Sobic007G092100 Sobic005G017300--Sobic007G092100 Sobic008G103700 Sobic008G103700 Sobic004G272200--Sobic008G103700 Sobic002G252000 Sobic002G252000 Sobic004G272200--Sobic002G252000 Sobic004G272200--Sobic001G007600 Sobic010G238800 Sobic010G238800 Sobic004G272200--Sobic010G238800 Sobic006G156000 Sobic006G156000 Sobic004G272200--Sobic006G156000 Sobic004G272200--Sobic004G138800 Sobic002G128800 Sobic002G128800 Sobic004G272200--Sobic002G128800 Sobic006G236500 Sobic006G236500 Sobic004G272200--Sobic006G236500 Sobic004G272200--Sobic001G096100 Sobic001G338400 Sobic001G338400 Sobic001G230100--Sobic001G338400 Sobic001G110400 Sobic001G110400 Sobic001G230100--Sobic001G110400 Sobic003G348800 Sobic003G348800 Sobic001G230100--Sobic003G348800 Sobic001G230100--Sobic001G007600 Sobic008G088830 Sobic008G088830 Sobic001G230100--Sobic008G088830 Sobic001G230100--Sobic009G229300 Sobic001G281900 Sobic001G281900 Sobic001G230100--Sobic001G281900 Sobic009G104000 Sobic009G104000 Sobic001G230100--Sobic009G104000 Sobic004G082900 Sobic004G082900 Sobic001G230100--Sobic004G082900 Sobic003G151300 Sobic003G151300 Sobic009G026200--Sobic003G151300 Sobic009G026200--Sobic004G134100 Sobic001G069800 Sobic001G069800 Sobic009G026200--Sobic001G069800 Sobic008G174800 Sobic008G174800 Sobic009G026200--Sobic008G174800 Sobic010G224900 Sobic010G224900 Sobic009G026200--Sobic010G224900 Sobic008G008400 Sobic008G008400 Sobic009G026200--Sobic008G008400 Sobic009G026200--Sobic004G051300 Sobic004G006700 Sobic004G006700 Sobic009G026200--Sobic004G006700 Sobic001G230900 Sobic001G230900 Sobic009G026200--Sobic001G230900 Sobic004G134100--Sobic009G026200 Sobic010G242900 Sobic010G242900 Sobic004G134100--Sobic010G242900 Sobic004G134100--Sobic001G069800 Sobic004G134100--Sobic004G006700 Sobic005G159600 Sobic005G159600 Sobic004G134100--Sobic005G159600 Sobic010G138500 Sobic010G138500 Sobic004G134100--Sobic010G138500 Sobic001G215900 Sobic001G215900 Sobic004G134100--Sobic001G215900 Sobic001G366800 Sobic001G366800 Sobic004G134100--Sobic001G366800 Sobic004G134100--Sobic003G151300 Sobic001G007600--Sobic004G138800 Sobic001G007600--Sobic009G067000 Sobic001G418900 Sobic001G418900 Sobic001G007600--Sobic001G418900 Sobic003G443300 Sobic003G443300 Sobic001G007600--Sobic003G443300 Sobic001G505500 Sobic001G505500 Sobic001G007600--Sobic001G505500 Sobic003G368500 Sobic003G368500 Sobic001G007600--Sobic003G368500 Sobic006G252200 Sobic006G252200 Sobic001G007600--Sobic006G252200 Sobic001G007600--Sobic009G182300 Sobic007G076300 Sobic007G076300 Sobic001G007600--Sobic007G076300
Octagon: transcription factors


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