Gene annotation
Transcriptome id Sobic.001G272900.1
Synonym Sb01g026720
Functional annotation avr9/Cf-9 rapidly elicited protein 74, putative, expressed
UniProt A0A1B6QLD1
Pfam PF04564
Panther DB PTHR22849 PTHR22849:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT5G37490 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os10g03440.1 : avr9/Cf-9 rapidly elicited protein 74, putative, expressed
MaizeGDB (Corn) Zm00025a003705
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G084300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphorylase domain containing protein, putative, expressed -
2 Sobic.007G120000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.003G106300 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
4 Sobic.003G263300 Protein kinase domain containing protein, expressed -
5 Sobic.010G001300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein transferase (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
6 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
7 Sobic.001G326400 cytochrome P450, putative, expressed -
8 Sobic.003G076700 cytochrome P450, putative, expressed -
9 Sobic.009G040175 - -
10 Sobic.007G214500 sucrose transporters(PubMedID : 23805151)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@sucrose transporter BoSUT1, putative, expressed K15378: solute carrier family 45, member 1/2/4
11 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.004G337950 - -
13 Sobic.001G218500 MATH domain containing protein, expressed -
14 Sobic.005G212800 carboxyl-terminal peptidase, putative, expressed -
15 Sobic.010G203600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.009G018300 vrga1, putative, expressed -
17 Sobic.005G205400 - -
18 Sobic.009G034800 WRKY5, expressed -
19 Sobic.009G225800 expressed protein -
20 Sobic.006G178300 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic001G272900 Sobic001G272900 Sobic009G084300 Sobic009G084300 Sobic001G272900--Sobic009G084300 Sobic007G120000 Sobic007G120000 Sobic001G272900--Sobic007G120000 Sobic003G106300 Sobic003G106300 Sobic001G272900--Sobic003G106300 Sobic003G263300 Sobic003G263300 Sobic001G272900--Sobic003G263300 Sobic010G001300 Sobic010G001300 Sobic001G272900--Sobic010G001300 Sobic003G080900 Sobic003G080900 Sobic001G272900--Sobic003G080900 Sobic001G326400 Sobic001G326400 Sobic001G272900--Sobic001G326400 Sobic003G076700 Sobic003G076700 Sobic001G272900--Sobic003G076700 Sobic009G040175 Sobic009G040175 Sobic001G272900--Sobic009G040175 Sobic009G084300--Sobic007G120000 Sobic001G218500 Sobic001G218500 Sobic009G084300--Sobic001G218500 Sobic009G084300--Sobic010G001300 Sobic001G302500 Sobic001G302500 Sobic009G084300--Sobic001G302500 Sobic003G020500 Sobic003G020500 Sobic009G084300--Sobic003G020500 Sobic006G230300 Sobic006G230300 Sobic009G084300--Sobic006G230300 Sobic010G128700 Sobic010G128700 Sobic009G084300--Sobic010G128700 Sobic001G216500 Sobic001G216500 Sobic009G084300--Sobic001G216500 Sobic001G299100 Sobic001G299100 Sobic009G084300--Sobic001G299100 Sobic007G120000--Sobic001G218500 Sobic007G120000--Sobic003G020500 Sobic007G120000--Sobic001G326400 Sobic007G120000--Sobic009G084300 Sobic005G075600 Sobic005G075600 Sobic007G120000--Sobic005G075600 Sobic007G120000--Sobic003G106300 Sobic003G017601 Sobic003G017601 Sobic007G120000--Sobic003G017601 Sobic001G067800 Sobic001G067800 Sobic007G120000--Sobic001G067800 Sobic005G134600 Sobic005G134600 Sobic007G120000--Sobic005G134600 Sobic003G106300--Sobic007G120000 Sobic003G106300--Sobic001G218500 Sobic007G214500 Sobic007G214500 Sobic003G106300--Sobic007G214500 Sobic003G106300--Sobic003G020500 Sobic007G021200 Sobic007G021200 Sobic003G106300--Sobic007G021200 Sobic007G193200 Sobic007G193200 Sobic003G106300--Sobic007G193200 Sobic003G106300--Sobic005G075600 Sobic003G079100 Sobic003G079100 Sobic003G106300--Sobic003G079100 Sobic003G106300--Sobic009G084300 Sobic003G263300--Sobic001G272900 Sobic006G061300 Sobic006G061300 Sobic003G263300--Sobic006G061300 Sobic010G098350 Sobic010G098350 Sobic003G263300--Sobic010G098350 Sobic005G210000 Sobic005G210000 Sobic003G263300--Sobic005G210000 Sobic003G070800 Sobic003G070800 Sobic003G263300--Sobic003G070800 Sobic009G034800 Sobic009G034800 Sobic003G263300--Sobic009G034800 Sobic008G009100 Sobic008G009100 Sobic003G263300--Sobic008G009100 Sobic001G387000 Sobic001G387000 Sobic003G263300--Sobic001G387000 Sobic007G158500 Sobic007G158500 Sobic003G263300--Sobic007G158500 Sobic010G001300--Sobic001G218500 Sobic004G014600 Sobic004G014600 Sobic010G001300--Sobic004G014600 Sobic007G135100 Sobic007G135100 Sobic010G001300--Sobic007G135100 Sobic004G119800 Sobic004G119800 Sobic010G001300--Sobic004G119800 Sobic002G195600 Sobic002G195600 Sobic010G001300--Sobic002G195600 Sobic006G196400 Sobic006G196400 Sobic010G001300--Sobic006G196400 Sobic006G092700 Sobic006G092700 Sobic010G001300--Sobic006G092700 Sobic010G097200 Sobic010G097200 Sobic010G001300--Sobic010G097200 Sobic001G209300 Sobic001G209300 Sobic010G001300--Sobic001G209300 Sobic002G117900 Sobic002G117900 Sobic003G080900--Sobic002G117900 Sobic003G080900--Sobic009G084300 Sobic003G229200 Sobic003G229200 Sobic003G080900--Sobic003G229200 Sobic003G080900--Sobic007G120000 Sobic009G161401 Sobic009G161401 Sobic003G080900--Sobic009G161401 Sobic002G155400 Sobic002G155400 Sobic003G080900--Sobic002G155400 Sobic003G273700 Sobic003G273700 Sobic003G080900--Sobic003G273700 Sobic004G106900 Sobic004G106900 Sobic003G080900--Sobic004G106900 Sobic007G196300 Sobic007G196300 Sobic003G080900--Sobic007G196300 Sobic001G326400--Sobic003G020500 Sobic001G326400--Sobic001G218500 Sobic005G219600 Sobic005G219600 Sobic001G326400--Sobic005G219600 Sobic001G506700 Sobic001G506700 Sobic001G326400--Sobic001G506700 Sobic002G019100 Sobic002G019100 Sobic001G326400--Sobic002G019100 Sobic001G326400--Sobic007G120000 Sobic002G166150 Sobic002G166150 Sobic001G326400--Sobic002G166150 Sobic001G326400--Sobic003G079100 Sobic004G308500 Sobic004G308500 Sobic001G326400--Sobic004G308500 Sobic003G076700--Sobic009G040175 Sobic003G076700--Sobic001G326400 Sobic005G049350 Sobic005G049350 Sobic003G076700--Sobic005G049350 Sobic007G149000 Sobic007G149000 Sobic003G076700--Sobic007G149000 Sobic001G277600 Sobic001G277600 Sobic003G076700--Sobic001G277600 Sobic003G076700--Sobic007G120000 Sobic004G337950 Sobic004G337950 Sobic003G076700--Sobic004G337950 Sobic003G176300 Sobic003G176300 Sobic003G076700--Sobic003G176300 Sobic003G076700--Sobic003G020500 Sobic009G040175--Sobic003G076700 Sobic009G040175--Sobic001G272900 Sobic001G499701 Sobic001G499701 Sobic009G040175--Sobic001G499701 Sobic009G040175--Sobic005G049350 Sobic005G220740 Sobic005G220740 Sobic009G040175--Sobic005G220740 Sobic009G040175--Sobic001G326400 Sobic009G040175--Sobic007G149000 Sobic005G048400 Sobic005G048400 Sobic009G040175--Sobic005G048400 Sobic002G063566 Sobic002G063566 Sobic009G040175--Sobic002G063566
Octagon: transcription factors


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