Gene annotation
Transcriptome id Sobic.009G034800.1,Sobic.009G034800.2
Synonym WRKY6, ATWRKY6
Functional annotation WRKY5, expressed
UniProt A0A1B6P6B9 , A0A1B6P6D2
Pfam PF03106
Panther DB PTHR31429 PTHR31429:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G04450 : WRKY family transcription factor
RAP-DB (Rice) LOC_Os05g04640.1 : WRKY5, expressed
MaizeGDB (Corn) Zm00025a050047 , Zm00025a055337
Brachypodium KQK04009
Barley HORVU3Hr1G033740.12 , HORVU3Hr1G033740.10 , HORVU3Hr1G033740.11 , HORVU6Hr1G079710.1 , HORVU6Hr1G079710.2 , HORVU3Hr1G033740.1 , HORVU3Hr1G033740.2 , HORVU3Hr1G033740.3 , HORVU3Hr1G033740.4 , HORVU3Hr1G033740.5 , HORVU3Hr1G033740.6 , HORVU3Hr1G033740.7 , HORVU3Hr1G033740.8 , HORVU3Hr1G033740.9
Wheat TraesCS6A02G326500 , TraesCS6A02G326500 , TraesCS3D02G173300 , TraesCS3D02G173300 , TraesCS3A02G167200 , TraesCS3A02G167200 , TraesCS6B02G357600 , TraesCS3B02G199000 , TraesCS3B02G199000 , TraesCS3B02G199000 , TraesCS6D02G306300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
2 Sobic.002G027700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@wound and phytochrome signaling involved receptor like kinase, putative, expressed -
3 Sobic.004G174100 expressed protein -
4 Sobic.007G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@patatin, putative, expressed -
5 Sobic.005G103700 - -
6 Sobic.001G319100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
8 Sobic.004G174000 expressed protein -
9 Sobic.002G067300 ATPase, putative, expressed -
10 Sobic.001G339600 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
11 Sobic.002G241400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.009G245700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.009G171600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY70, expressed -
14 Sobic.006G061300 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
15 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G216050 - -
17 Sobic.010G203600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.008G142100 No apical meristem protein, putative, expressed -
19 Sobic.010G224600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR26 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
20 Sobic.009G121600 cytochrome P450 86A2, putative, expressed -


Gene co-expression network
sample Sobic009G034800 Sobic009G034800 Sobic002G130700 Sobic002G130700 Sobic009G034800--Sobic002G130700 Sobic002G027700 Sobic002G027700 Sobic009G034800--Sobic002G027700 Sobic004G174100 Sobic004G174100 Sobic009G034800--Sobic004G174100 Sobic007G158500 Sobic007G158500 Sobic009G034800--Sobic007G158500 Sobic005G103700 Sobic005G103700 Sobic009G034800--Sobic005G103700 Sobic001G319100 Sobic001G319100 Sobic009G034800--Sobic001G319100 Sobic002G216500 Sobic002G216500 Sobic009G034800--Sobic002G216500 Sobic004G174000 Sobic004G174000 Sobic009G034800--Sobic004G174000 Sobic002G067300 Sobic002G067300 Sobic009G034800--Sobic002G067300 Sobic002G130700--Sobic009G034800 Sobic004G275200 Sobic004G275200 Sobic002G130700--Sobic004G275200 Sobic005G129400 Sobic005G129400 Sobic002G130700--Sobic005G129400 Sobic002G130700--Sobic004G174100 Sobic006G242000 Sobic006G242000 Sobic002G130700--Sobic006G242000 Sobic002G130700--Sobic002G027700 Sobic009G245700 Sobic009G245700 Sobic002G130700--Sobic009G245700 Sobic001G427200 Sobic001G427200 Sobic002G130700--Sobic001G427200 Sobic002G241400 Sobic002G241400 Sobic002G130700--Sobic002G241400 Sobic002G027700--Sobic002G130700 Sobic002G027700--Sobic009G034800 Sobic002G073900 Sobic002G073900 Sobic002G027700--Sobic002G073900 Sobic004G349300 Sobic004G349300 Sobic002G027700--Sobic004G349300 Sobic001G233200 Sobic001G233200 Sobic002G027700--Sobic001G233200 Sobic003G385500 Sobic003G385500 Sobic002G027700--Sobic003G385500 Sobic002G193400 Sobic002G193400 Sobic002G027700--Sobic002G193400 Sobic001G387000 Sobic001G387000 Sobic002G027700--Sobic001G387000 Sobic002G048800 Sobic002G048800 Sobic002G027700--Sobic002G048800 Sobic004G174100--Sobic001G427200 Sobic004G174100--Sobic006G242000 Sobic004G174100--Sobic002G130700 Sobic005G064800 Sobic005G064800 Sobic004G174100--Sobic005G064800 Sobic001G022600 Sobic001G022600 Sobic004G174100--Sobic001G022600 Sobic004G174100--Sobic002G193400 Sobic008G142600 Sobic008G142600 Sobic004G174100--Sobic008G142600 Sobic004G293000 Sobic004G293000 Sobic004G174100--Sobic004G293000 Sobic004G253900 Sobic004G253900 Sobic004G174100--Sobic004G253900 Sobic009G171600 Sobic009G171600 Sobic007G158500--Sobic009G171600 Sobic010G018300 Sobic010G018300 Sobic007G158500--Sobic010G018300 Sobic002G386200 Sobic002G386200 Sobic007G158500--Sobic002G386200 Sobic001G331000 Sobic001G331000 Sobic007G158500--Sobic001G331000 Sobic001G319200 Sobic001G319200 Sobic007G158500--Sobic001G319200 Sobic007G158500--Sobic009G034800 Sobic004G167300 Sobic004G167300 Sobic007G158500--Sobic004G167300 Sobic001G146400 Sobic001G146400 Sobic007G158500--Sobic001G146400 Sobic009G067400 Sobic009G067400 Sobic007G158500--Sobic009G067400 Sobic005G103700--Sobic002G130700 Sobic005G103700--Sobic009G034800 Sobic005G103700--Sobic009G171600 Sobic004G067200 Sobic004G067200 Sobic005G103700--Sobic004G067200 Sobic005G103700--Sobic001G319100 Sobic006G246300 Sobic006G246300 Sobic005G103700--Sobic006G246300 Sobic008G142100 Sobic008G142100 Sobic005G103700--Sobic008G142100 Sobic005G103700--Sobic007G158500 Sobic001G075000 Sobic001G075000 Sobic005G103700--Sobic001G075000 Sobic009G121600 Sobic009G121600 Sobic001G319100--Sobic009G121600 Sobic009G216050 Sobic009G216050 Sobic001G319100--Sobic009G216050 Sobic006G246200 Sobic006G246200 Sobic001G319100--Sobic006G246200 Sobic005G082700 Sobic005G082700 Sobic001G319100--Sobic005G082700 Sobic001G319100--Sobic008G142100 Sobic004G101000 Sobic004G101000 Sobic001G319100--Sobic004G101000 Sobic001G319100--Sobic009G067400 Sobic006G190000 Sobic006G190000 Sobic001G319100--Sobic006G190000 Sobic001G381300 Sobic001G381300 Sobic001G319100--Sobic001G381300 Sobic004G220600 Sobic004G220600 Sobic002G216500--Sobic004G220600 Sobic006G045000 Sobic006G045000 Sobic002G216500--Sobic006G045000 Sobic005G218500 Sobic005G218500 Sobic002G216500--Sobic005G218500 Sobic010G214200 Sobic010G214200 Sobic002G216500--Sobic010G214200 Sobic004G209500 Sobic004G209500 Sobic002G216500--Sobic004G209500 Sobic006G014700 Sobic006G014700 Sobic002G216500--Sobic006G014700 Sobic003G378301 Sobic003G378301 Sobic002G216500--Sobic003G378301 Sobic003G310500 Sobic003G310500 Sobic002G216500--Sobic003G310500 Sobic004G217700 Sobic004G217700 Sobic002G216500--Sobic004G217700 Sobic004G174000--Sobic009G216050 Sobic004G174000--Sobic002G216500 Sobic004G174000--Sobic004G209500 Sobic004G174000--Sobic003G310500 Sobic004G333300 Sobic004G333300 Sobic004G174000--Sobic004G333300 Sobic003G248901 Sobic003G248901 Sobic004G174000--Sobic003G248901 Sobic004G174000--Sobic006G014700 Sobic004G174000--Sobic006G045000 Sobic008G038100 Sobic008G038100 Sobic004G174000--Sobic008G038100 Sobic006G113000 Sobic006G113000 Sobic002G067300--Sobic006G113000 Sobic002G067300--Sobic001G319200 Sobic007G115500 Sobic007G115500 Sobic002G067300--Sobic007G115500 Sobic006G021900 Sobic006G021900 Sobic002G067300--Sobic006G021900 Sobic003G360200 Sobic003G360200 Sobic002G067300--Sobic003G360200 Sobic006G009000 Sobic006G009000 Sobic002G067300--Sobic006G009000 Sobic002G024000 Sobic002G024000 Sobic002G067300--Sobic002G024000 Sobic006G031200 Sobic006G031200 Sobic002G067300--Sobic006G031200 Sobic005G161100 Sobic005G161100 Sobic002G067300--Sobic005G161100
Octagon: transcription factors


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