Gene annotation
Transcriptome id Sobic.002G027700.1
Synonym Sb02g002470
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
wound and phytochrome signaling involved receptor like kinase, putative, expressed
UniProt C5X8V4
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF67
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G16250 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os07g04220.1 : wound and phytochrome signaling involved receptor like kinase, putative, expressed
MaizeGDB (Corn) Zm00025a044968
Brachypodium PNT77113
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
2 Sobic.009G034800 WRKY5, expressed -
3 Sobic.002G073900 expressed protein -
4 Sobic.004G349300 tyrosine protein kinase domain containing protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.001G233200 - -
6 Sobic.003G385500 "Lypoxygenase, probably induced by oxidative stress, up-regulated under severe drought stress"(PubMedID : 24655390)@lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
7 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein
8 Sobic.001G387000 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
9 Sobic.002G048800 expressed protein -
10 Sobic.008G085350 - -
11 Sobic.005G093400 expressed protein -
12 Sobic.004G161800 - -
13 Sobic.006G078500 abscisic stress-ripening, putative, expressed -
14 Sobic.004G174100 expressed protein -
15 Sobic.003G206800 DUF538 domain containing protein, putative, expressed -
16 Sobic.008G081400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
17 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.010G098350 - -
19 Sobic.001G432500 expressed protein -
20 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -


Gene co-expression network
sample Sobic002G027700 Sobic002G027700 Sobic002G130700 Sobic002G130700 Sobic002G027700--Sobic002G130700 Sobic009G034800 Sobic009G034800 Sobic002G027700--Sobic009G034800 Sobic002G073900 Sobic002G073900 Sobic002G027700--Sobic002G073900 Sobic004G349300 Sobic004G349300 Sobic002G027700--Sobic004G349300 Sobic001G233200 Sobic001G233200 Sobic002G027700--Sobic001G233200 Sobic003G385500 Sobic003G385500 Sobic002G027700--Sobic003G385500 Sobic002G193400 Sobic002G193400 Sobic002G027700--Sobic002G193400 Sobic001G387000 Sobic001G387000 Sobic002G027700--Sobic001G387000 Sobic002G048800 Sobic002G048800 Sobic002G027700--Sobic002G048800 Sobic002G130700--Sobic009G034800 Sobic004G275200 Sobic004G275200 Sobic002G130700--Sobic004G275200 Sobic005G129400 Sobic005G129400 Sobic002G130700--Sobic005G129400 Sobic004G174100 Sobic004G174100 Sobic002G130700--Sobic004G174100 Sobic006G242000 Sobic006G242000 Sobic002G130700--Sobic006G242000 Sobic002G130700--Sobic002G027700 Sobic009G245700 Sobic009G245700 Sobic002G130700--Sobic009G245700 Sobic001G427200 Sobic001G427200 Sobic002G130700--Sobic001G427200 Sobic002G241400 Sobic002G241400 Sobic002G130700--Sobic002G241400 Sobic009G034800--Sobic002G130700 Sobic009G034800--Sobic002G027700 Sobic009G034800--Sobic004G174100 Sobic007G158500 Sobic007G158500 Sobic009G034800--Sobic007G158500 Sobic005G103700 Sobic005G103700 Sobic009G034800--Sobic005G103700 Sobic001G319100 Sobic001G319100 Sobic009G034800--Sobic001G319100 Sobic002G216500 Sobic002G216500 Sobic009G034800--Sobic002G216500 Sobic004G174000 Sobic004G174000 Sobic009G034800--Sobic004G174000 Sobic002G067300 Sobic002G067300 Sobic009G034800--Sobic002G067300 Sobic003G308700 Sobic003G308700 Sobic002G073900--Sobic003G308700 Sobic005G072200 Sobic005G072200 Sobic002G073900--Sobic005G072200 Sobic006G042200 Sobic006G042200 Sobic002G073900--Sobic006G042200 Sobic007G054100 Sobic007G054100 Sobic002G073900--Sobic007G054100 Sobic001G261597 Sobic001G261597 Sobic002G073900--Sobic001G261597 Sobic004G092000 Sobic004G092000 Sobic002G073900--Sobic004G092000 Sobic009G008100 Sobic009G008100 Sobic002G073900--Sobic009G008100 Sobic004G227300 Sobic004G227300 Sobic002G073900--Sobic004G227300 Sobic010G009400 Sobic010G009400 Sobic002G073900--Sobic010G009400 Sobic005G093400 Sobic005G093400 Sobic004G349300--Sobic005G093400 Sobic004G349300--Sobic009G245700 Sobic001G258000 Sobic001G258000 Sobic004G349300--Sobic001G258000 Sobic001G528300 Sobic001G528300 Sobic004G349300--Sobic001G528300 Sobic004G349300--Sobic002G193400 Sobic002G117200 Sobic002G117200 Sobic004G349300--Sobic002G117200 Sobic003G402200 Sobic003G402200 Sobic004G349300--Sobic003G402200 Sobic004G349300--Sobic002G027700 Sobic009G205600 Sobic009G205600 Sobic004G349300--Sobic009G205600 Sobic008G085350 Sobic008G085350 Sobic001G233200--Sobic008G085350 Sobic006G045000 Sobic006G045000 Sobic001G233200--Sobic006G045000 Sobic001G201800 Sobic001G201800 Sobic001G233200--Sobic001G201800 Sobic004G078600 Sobic004G078600 Sobic001G233200--Sobic004G078600 Sobic005G133166 Sobic005G133166 Sobic001G233200--Sobic005G133166 Sobic002G423600 Sobic002G423600 Sobic001G233200--Sobic002G423600 Sobic004G209500 Sobic004G209500 Sobic001G233200--Sobic004G209500 Sobic001G012000 Sobic001G012000 Sobic001G233200--Sobic001G012000 SobicK044407 SobicK044407 Sobic001G233200--SobicK044407 Sobic003G385500--Sobic006G045000 Sobic005G182701 Sobic005G182701 Sobic003G385500--Sobic005G182701 Sobic001G056400 Sobic001G056400 Sobic003G385500--Sobic001G056400 Sobic007G055600 Sobic007G055600 Sobic003G385500--Sobic007G055600 Sobic009G014600 Sobic009G014600 Sobic003G385500--Sobic009G014600 Sobic001G056500 Sobic001G056500 Sobic003G385500--Sobic001G056500 Sobic007G076000 Sobic007G076000 Sobic003G385500--Sobic007G076000 Sobic008G038100 Sobic008G038100 Sobic003G385500--Sobic008G038100 Sobic001G410450 Sobic001G410450 Sobic003G385500--Sobic001G410450 Sobic001G427500 Sobic001G427500 Sobic002G193400--Sobic001G427500 Sobic001G022600 Sobic001G022600 Sobic002G193400--Sobic001G022600 Sobic002G339500 Sobic002G339500 Sobic002G193400--Sobic002G339500 Sobic002G193400--Sobic003G402200 Sobic006G127400 Sobic006G127400 Sobic002G193400--Sobic006G127400 Sobic009G190800 Sobic009G190800 Sobic002G193400--Sobic009G190800 Sobic002G193400--Sobic005G072200 Sobic001G075000 Sobic001G075000 Sobic002G193400--Sobic001G075000 Sobic006G052200 Sobic006G052200 Sobic002G193400--Sobic006G052200 Sobic002G257100 Sobic002G257100 Sobic001G387000--Sobic002G257100 Sobic001G145050 Sobic001G145050 Sobic001G387000--Sobic001G145050 Sobic002G209100 Sobic002G209100 Sobic001G387000--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic001G387000--Sobic002G041800 Sobic001G339600 Sobic001G339600 Sobic001G387000--Sobic001G339600 Sobic002G271600 Sobic002G271600 Sobic001G387000--Sobic002G271600 Sobic004G258400 Sobic004G258400 Sobic001G387000--Sobic004G258400 Sobic005G085500 Sobic005G085500 Sobic001G387000--Sobic005G085500 Sobic009G037200 Sobic009G037200 Sobic001G387000--Sobic009G037200 Sobic003G206800 Sobic003G206800 Sobic002G048800--Sobic003G206800 Sobic002G048800--Sobic002G193400 Sobic002G048800--Sobic002G073900 Sobic002G048800--Sobic003G402200 Sobic008G142600 Sobic008G142600 Sobic002G048800--Sobic008G142600 Sobic009G110500 Sobic009G110500 Sobic002G048800--Sobic009G110500 Sobic003G135800 Sobic003G135800 Sobic002G048800--Sobic003G135800 Sobic002G048800--Sobic004G349300 Sobic001G427700 Sobic001G427700 Sobic002G048800--Sobic001G427700
Octagon: transcription factors


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