Gene annotation
Transcriptome id Sobic.004G161800.2
Synonym
Functional annotation -
UniProt A0A1Z5RMV8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.004G161800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G233200 - -
2 Sobic.005G133166 - -
3 Sobic.009G233900 dehydrogenase, putative, expressed -
4 Sobic.008G137800 expressed protein -
5 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
6 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.005G085500 - -
8 Sobic.003G151800 expressed protein -
9 Sobic.006G045000 drought-induced protein 1, putative, expressed -
10 Sobic.001G410450 - -
11 Sobic.009G216050 - -
12 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
13 Sobic.010G098350 - -
14 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
15 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
16 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
17 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
18 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
19 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
20 Sobic.005G182701 - -


Gene co-expression network
sample Sobic004G161800 Sobic004G161800 Sobic001G233200 Sobic001G233200 Sobic004G161800--Sobic001G233200 Sobic005G133166 Sobic005G133166 Sobic004G161800--Sobic005G133166 Sobic009G233900 Sobic009G233900 Sobic004G161800--Sobic009G233900 Sobic008G137800 Sobic008G137800 Sobic004G161800--Sobic008G137800 Sobic002G423600 Sobic002G423600 Sobic004G161800--Sobic002G423600 Sobic004G209500 Sobic004G209500 Sobic004G161800--Sobic004G209500 Sobic005G085500 Sobic005G085500 Sobic004G161800--Sobic005G085500 Sobic003G151800 Sobic003G151800 Sobic004G161800--Sobic003G151800 Sobic006G045000 Sobic006G045000 Sobic004G161800--Sobic006G045000 Sobic008G085350 Sobic008G085350 Sobic001G233200--Sobic008G085350 Sobic001G233200--Sobic006G045000 Sobic001G201800 Sobic001G201800 Sobic001G233200--Sobic001G201800 Sobic004G078600 Sobic004G078600 Sobic001G233200--Sobic004G078600 Sobic001G233200--Sobic005G133166 Sobic001G233200--Sobic002G423600 Sobic001G233200--Sobic004G209500 Sobic001G012000 Sobic001G012000 Sobic001G233200--Sobic001G012000 SobicK044407 SobicK044407 Sobic001G233200--SobicK044407 Sobic005G082700 Sobic005G082700 Sobic005G133166--Sobic005G082700 Sobic005G133166--SobicK044407 Sobic008G181801 Sobic008G181801 Sobic005G133166--Sobic008G181801 Sobic005G133166--Sobic001G012000 Sobic010G210700 Sobic010G210700 Sobic005G133166--Sobic010G210700 Sobic002G173900 Sobic002G173900 Sobic005G133166--Sobic002G173900 Sobic005G133166--Sobic005G085500 Sobic005G133166--Sobic006G045000 Sobic006G168000 Sobic006G168000 Sobic005G133166--Sobic006G168000 Sobic001G056500 Sobic001G056500 Sobic009G233900--Sobic001G056500 Sobic009G075100 Sobic009G075100 Sobic009G233900--Sobic009G075100 Sobic009G233900--Sobic004G209500 Sobic009G233900--Sobic002G423600 Sobic009G233900--Sobic004G078600 Sobic004G217700 Sobic004G217700 Sobic009G233900--Sobic004G217700 Sobic009G233900--Sobic001G201800 Sobic001G449800 Sobic001G449800 Sobic009G233900--Sobic001G449800 Sobic009G115400 Sobic009G115400 Sobic009G233900--Sobic009G115400 Sobic003G214000 Sobic003G214000 Sobic008G137800--Sobic003G214000 Sobic008G137800--Sobic004G078600 Sobic001G145050 Sobic001G145050 Sobic008G137800--Sobic001G145050 Sobic001G179100 Sobic001G179100 Sobic008G137800--Sobic001G179100 Sobic001G315800 Sobic001G315800 Sobic008G137800--Sobic001G315800 Sobic009G152400 Sobic009G152400 Sobic008G137800--Sobic009G152400 Sobic003G402200 Sobic003G402200 Sobic008G137800--Sobic003G402200 Sobic004G068700 Sobic004G068700 Sobic008G137800--Sobic004G068700 Sobic006G060800 Sobic006G060800 Sobic008G137800--Sobic006G060800 Sobic001G056400 Sobic001G056400 Sobic002G423600--Sobic001G056400 Sobic005G182701 Sobic005G182701 Sobic002G423600--Sobic005G182701 Sobic002G423600--Sobic001G201800 Sobic002G423600--Sobic001G012000 Sobic002G423600--Sobic004G078600 Sobic002G423600--Sobic004G217700 Sobic007G055600 Sobic007G055600 Sobic002G423600--Sobic007G055600 Sobic002G423600--SobicK044407 Sobic002G423600--Sobic006G045000 Sobic009G216050 Sobic009G216050 Sobic004G209500--Sobic009G216050 Sobic004G209500--Sobic006G045000 Sobic010G214200 Sobic010G214200 Sobic004G209500--Sobic010G214200 Sobic003G310500 Sobic003G310500 Sobic004G209500--Sobic003G310500 Sobic004G209500--Sobic005G085500 Sobic004G209500--Sobic009G233900 Sobic002G216500 Sobic002G216500 Sobic004G209500--Sobic002G216500 Sobic002G209100 Sobic002G209100 Sobic004G209500--Sobic002G209100 Sobic004G209500--Sobic004G217700 Sobic002G041800 Sobic002G041800 Sobic005G085500--Sobic002G041800 Sobic005G085500--Sobic008G181801 Sobic005G085500--SobicK044407 Sobic004G195800 Sobic004G195800 Sobic005G085500--Sobic004G195800 Sobic005G085500--Sobic002G209100 Sobic005G085500--Sobic006G045000 Sobic005G085500--Sobic001G012000 Sobic005G085500--Sobic002G423600 Sobic005G085500--Sobic004G078600 Sobic003G151800--Sobic003G402200 Sobic009G205600 Sobic009G205600 Sobic003G151800--Sobic009G205600 Sobic003G151800--Sobic001G145050 Sobic002G271600 Sobic002G271600 Sobic003G151800--Sobic002G271600 Sobic005G089000 Sobic005G089000 Sobic003G151800--Sobic005G089000 Sobic006G053700 Sobic006G053700 Sobic003G151800--Sobic006G053700 Sobic003G151800--Sobic008G137800 Sobic007G014600 Sobic007G014600 Sobic003G151800--Sobic007G014600 Sobic003G255100 Sobic003G255100 Sobic003G151800--Sobic003G255100 Sobic006G045000--SobicK044407 Sobic006G045000--Sobic001G012000 Sobic006G045000--Sobic001G056400 Sobic006G045000--Sobic008G181801 Sobic006G045000--Sobic002G423600 Sobic003G378301 Sobic003G378301 Sobic006G045000--Sobic003G378301 Sobic006G045000--Sobic005G182701 Sobic006G045000--Sobic001G201800 Sobic006G045000--Sobic004G217700
Octagon: transcription factors


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