Gene annotation
Transcriptome id Sobic.004G349300.1
Synonym CRCK2, Sb04g037600
Functional annotation tyrosine protein kinase domain containing protein, putative, expressed
UniProt C5XW02
Pfam PF00069
Panther DB PTHR27003 PTHR27003:SF60
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G00330 : calmodulin-binding receptor-like cytoplasmic kinase 2
RAP-DB (Rice) LOC_Os02g57560.1 : tyrosine protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a025091 , Zm00025a004854 , Zm00025a032767 , Zm00025a026829
Brachypodium KQK07880 , KQK01424 , KQJ82756
Barley HORVU6Hr1G091790.2 , HORVU6Hr1G091790.3 , HORVU6Hr1G091790.1 , HORVU6Hr1G091790.4 , HORVU6Hr1G091790.5 , HORVU3Hr1G085360.11 , HORVU3Hr1G085360.9 , HORVU3Hr1G085360.8 , HORVU3Hr1G085360.7 , HORVU3Hr1G085360.6 , HORVU3Hr1G085360.5 , HORVU3Hr1G085360.4 , HORVU3Hr1G085360.3 , HORVU3Hr1G085360.1
Wheat TraesCS6B02G439700 , TraesCS6A02G399500 , TraesCS6D02G383700 , TraesCS5B02G501300 , TraesCS5B02G501300 , TraesCS5B02G501300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G093400 expressed protein -
2 Sobic.009G245700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G258000 tyrosine protein kinase domain containing protein, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
4 Sobic.001G528300 heavy metal-associated domain containing protein, expressed -
5 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein
6 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
7 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
8 Sobic.002G027700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@wound and phytochrome signaling involved receptor like kinase, putative, expressed -
9 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
10 Sobic.002G048800 expressed protein -
11 Sobic.008G074500 Probable leucine-rich repeat receptor-like protein kinase At5g49770(PubMedID : 31721651)@leucine-rich repeat family protein, putative, expressed -
12 Sobic.006G021900 Multidrug resistence-associated protein 4(PubMedID : 26320239)@ABC transporter family protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
13 Sobic.002G067300 ATPase, putative, expressed -
14 Sobic.004G181500 DNA repair protein Rad51, putative, expressed K10880: DNA-repair protein XRCC3
15 Sobic.001G240800 tyrosine protein kinase domain containing protein, putative, expressed -
16 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
17 Sobic.003G264901 - -
18 Sobic.008G081400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
19 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G349300 Sobic004G349300 Sobic005G093400 Sobic005G093400 Sobic004G349300--Sobic005G093400 Sobic009G245700 Sobic009G245700 Sobic004G349300--Sobic009G245700 Sobic001G258000 Sobic001G258000 Sobic004G349300--Sobic001G258000 Sobic001G528300 Sobic001G528300 Sobic004G349300--Sobic001G528300 Sobic002G193400 Sobic002G193400 Sobic004G349300--Sobic002G193400 Sobic002G117200 Sobic002G117200 Sobic004G349300--Sobic002G117200 Sobic003G402200 Sobic003G402200 Sobic004G349300--Sobic003G402200 Sobic002G027700 Sobic002G027700 Sobic004G349300--Sobic002G027700 Sobic009G205600 Sobic009G205600 Sobic004G349300--Sobic009G205600 Sobic008G038100 Sobic008G038100 Sobic005G093400--Sobic008G038100 Sobic002G209100 Sobic002G209100 Sobic005G093400--Sobic002G209100 Sobic009G038200 Sobic009G038200 Sobic005G093400--Sobic009G038200 Sobic005G093400--Sobic009G205600 Sobic005G093400--Sobic004G349300 Sobic003G264901 Sobic003G264901 Sobic005G093400--Sobic003G264901 Sobic001G410450 Sobic001G410450 Sobic005G093400--Sobic001G410450 Sobic009G233900 Sobic009G233900 Sobic005G093400--Sobic009G233900 Sobic004G195800 Sobic004G195800 Sobic005G093400--Sobic004G195800 Sobic009G245700--Sobic003G264901 Sobic006G053700 Sobic006G053700 Sobic009G245700--Sobic006G053700 Sobic001G293800 Sobic001G293800 Sobic009G245700--Sobic001G293800 Sobic004G096300 Sobic004G096300 Sobic009G245700--Sobic004G096300 Sobic004G275200 Sobic004G275200 Sobic009G245700--Sobic004G275200 Sobic005G129400 Sobic005G129400 Sobic009G245700--Sobic005G129400 Sobic007G148200 Sobic007G148200 Sobic009G245700--Sobic007G148200 Sobic009G245700--Sobic004G349300 Sobic002G130700 Sobic002G130700 Sobic009G245700--Sobic002G130700 Sobic007G079700 Sobic007G079700 Sobic001G258000--Sobic007G079700 Sobic001G427500 Sobic001G427500 Sobic001G258000--Sobic001G427500 Sobic005G096300 Sobic005G096300 Sobic001G258000--Sobic005G096300 Sobic009G114800 Sobic009G114800 Sobic001G258000--Sobic009G114800 Sobic004G027900 Sobic004G027900 Sobic001G258000--Sobic004G027900 Sobic001G258000--Sobic004G349300 Sobic007G062500 Sobic007G062500 Sobic001G258000--Sobic007G062500 Sobic001G053900 Sobic001G053900 Sobic001G258000--Sobic001G053900 Sobic004G181500 Sobic004G181500 Sobic001G258000--Sobic004G181500 Sobic003G139000 Sobic003G139000 Sobic001G528300--Sobic003G139000 Sobic001G528300--Sobic004G349300 Sobic001G528300--Sobic001G258000 Sobic001G162200 Sobic001G162200 Sobic001G528300--Sobic001G162200 Sobic006G014000 Sobic006G014000 Sobic001G528300--Sobic006G014000 Sobic002G016300 Sobic002G016300 Sobic001G528300--Sobic002G016300 Sobic001G528300--Sobic002G117200 Sobic003G299800 Sobic003G299800 Sobic001G528300--Sobic003G299800 Sobic007G020300 Sobic007G020300 Sobic001G528300--Sobic007G020300 Sobic002G193400--Sobic001G427500 Sobic001G022600 Sobic001G022600 Sobic002G193400--Sobic001G022600 Sobic002G339500 Sobic002G339500 Sobic002G193400--Sobic002G339500 Sobic002G193400--Sobic003G402200 Sobic006G127400 Sobic006G127400 Sobic002G193400--Sobic006G127400 Sobic009G190800 Sobic009G190800 Sobic002G193400--Sobic009G190800 Sobic005G072200 Sobic005G072200 Sobic002G193400--Sobic005G072200 Sobic001G075000 Sobic001G075000 Sobic002G193400--Sobic001G075000 Sobic006G052200 Sobic006G052200 Sobic002G193400--Sobic006G052200 Sobic009G156300 Sobic009G156300 Sobic002G117200--Sobic009G156300 Sobic004G352900 Sobic004G352900 Sobic002G117200--Sobic004G352900 Sobic003G003000 Sobic003G003000 Sobic002G117200--Sobic003G003000 Sobic001G285000 Sobic001G285000 Sobic002G117200--Sobic001G285000 Sobic009G131100 Sobic009G131100 Sobic002G117200--Sobic009G131100 Sobic002G123200 Sobic002G123200 Sobic002G117200--Sobic002G123200 Sobic002G117200--Sobic001G022600 Sobic004G060600 Sobic004G060600 Sobic002G117200--Sobic004G060600 Sobic009G080200 Sobic009G080200 Sobic002G117200--Sobic009G080200 Sobic001G145050 Sobic001G145050 Sobic003G402200--Sobic001G145050 Sobic003G402200--Sobic009G205600 Sobic004G078600 Sobic004G078600 Sobic003G402200--Sobic004G078600 Sobic003G151800 Sobic003G151800 Sobic003G402200--Sobic003G151800 Sobic001G320700 Sobic001G320700 Sobic003G402200--Sobic001G320700 Sobic001G201800 Sobic001G201800 Sobic003G402200--Sobic001G201800 Sobic001G427700 Sobic001G427700 Sobic003G402200--Sobic001G427700 Sobic005G089000 Sobic005G089000 Sobic003G402200--Sobic005G089000 Sobic008G111300 Sobic008G111300 Sobic003G402200--Sobic008G111300 Sobic002G027700--Sobic002G130700 Sobic009G034800 Sobic009G034800 Sobic002G027700--Sobic009G034800 Sobic002G073900 Sobic002G073900 Sobic002G027700--Sobic002G073900 Sobic002G027700--Sobic004G349300 Sobic001G233200 Sobic001G233200 Sobic002G027700--Sobic001G233200 Sobic003G385500 Sobic003G385500 Sobic002G027700--Sobic003G385500 Sobic002G027700--Sobic002G193400 Sobic001G387000 Sobic001G387000 Sobic002G027700--Sobic001G387000 Sobic002G048800 Sobic002G048800 Sobic002G027700--Sobic002G048800 Sobic004G217700 Sobic004G217700 Sobic009G205600--Sobic004G217700 Sobic009G205600--Sobic003G402200 Sobic002G271600 Sobic002G271600 Sobic009G205600--Sobic002G271600 Sobic009G205600--Sobic001G410450 Sobic007G014600 Sobic007G014600 Sobic009G205600--Sobic007G014600 Sobic009G205600--Sobic004G195800 Sobic009G205600--Sobic002G209100 Sobic006G060800 Sobic006G060800 Sobic009G205600--Sobic006G060800 Sobic004G187300 Sobic004G187300 Sobic009G205600--Sobic004G187300
Octagon: transcription factors


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