Gene annotation
Transcriptome id Sobic.003G388300.1
Synonym Sb03g042650, RNS2
Functional annotation ribonuclease T2 family domain containing protein, expressed
UniProt A0A1B6Q7K4
Pfam PF00445
Panther DB PTHR11240 PTHR11240:SF26
NCBI CDD KOG1642; Ribonuclease, T2 family
KEGG Orthology K01166; ribonuclease T2
Gene Ontology GO:0003723; RNA binding


Orthologs (automatic annotation)
TAIR AT2G39780 : ribonuclease 2
RAP-DB (Rice) LOC_Os01g67190.1 : ribonuclease T2 family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026433
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G283900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G231600 CBS domain containing membrane protein, putative, expressed -
3 Sobic.007G196300 ubiquitin-associated protein, putative, expressed -
4 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
5 Sobic.003G201200 hsp20/alpha crystallin family protein, putative, expressed -
6 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
7 Sobic.010G276700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
8 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
9 Sobic.003G078900 reticulon domain containing protein, putative, expressed -
10 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
11 Sobic.005G219600 protein kinase domain containing protein, expressed -
12 Sobic.001G307600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
13 Sobic.001G261460 - -
14 Sobic.001G227850 - -
15 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
16 Sobic.005G110457 - -
17 Sobic.002G094600 "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@"cellulose synthase A2, incorporate UDP-sugars into cellulose"(PubMedID : 28944535)@CESA6 - cellulose synthase, expressed K10999: cellulose synthase A
18 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
20 Sobic.008G084600 adenylate kinase, putative, expressed K00939: adk, adenylate kinase


Gene co-expression network
sample Sobic003G388300 Sobic003G388300 Sobic002G283900 Sobic002G283900 Sobic003G388300--Sobic002G283900 Sobic003G231600 Sobic003G231600 Sobic003G388300--Sobic003G231600 Sobic007G196300 Sobic007G196300 Sobic003G388300--Sobic007G196300 Sobic010G218300 Sobic010G218300 Sobic003G388300--Sobic010G218300 Sobic003G201200 Sobic003G201200 Sobic003G388300--Sobic003G201200 Sobic001G067800 Sobic001G067800 Sobic003G388300--Sobic001G067800 Sobic010G276700 Sobic010G276700 Sobic003G388300--Sobic010G276700 Sobic009G221800 Sobic009G221800 Sobic003G388300--Sobic009G221800 Sobic003G078900 Sobic003G078900 Sobic003G388300--Sobic003G078900 Sobic002G283900--Sobic003G231600 Sobic005G219600 Sobic005G219600 Sobic002G283900--Sobic005G219600 Sobic002G283900--Sobic001G067800 Sobic001G302500 Sobic001G302500 Sobic002G283900--Sobic001G302500 Sobic002G283900--Sobic010G218300 Sobic008G191400 Sobic008G191400 Sobic002G283900--Sobic008G191400 Sobic003G273700 Sobic003G273700 Sobic002G283900--Sobic003G273700 Sobic001G227850 Sobic001G227850 Sobic002G283900--Sobic001G227850 Sobic001G218500 Sobic001G218500 Sobic002G283900--Sobic001G218500 Sobic001G261460 Sobic001G261460 Sobic003G231600--Sobic001G261460 Sobic003G231600--Sobic002G283900 Sobic003G231600--Sobic009G221800 Sobic010G113100 Sobic010G113100 Sobic003G231600--Sobic010G113100 Sobic007G047500 Sobic007G047500 Sobic003G231600--Sobic007G047500 Sobic007G100700 Sobic007G100700 Sobic003G231600--Sobic007G100700 Sobic008G011700 Sobic008G011700 Sobic003G231600--Sobic008G011700 Sobic001G067100 Sobic001G067100 Sobic003G231600--Sobic001G067100 Sobic003G426500 Sobic003G426500 Sobic003G231600--Sobic003G426500 Sobic007G196300--Sobic002G283900 Sobic005G024900 Sobic005G024900 Sobic007G196300--Sobic005G024900 Sobic003G440900 Sobic003G440900 Sobic007G196300--Sobic003G440900 Sobic004G173600 Sobic004G173600 Sobic007G196300--Sobic004G173600 Sobic003G080900 Sobic003G080900 Sobic007G196300--Sobic003G080900 Sobic007G196300--Sobic003G388300 Sobic007G120000 Sobic007G120000 Sobic007G196300--Sobic007G120000 Sobic003G106300 Sobic003G106300 Sobic007G196300--Sobic003G106300 Sobic005G152200 Sobic005G152200 Sobic007G196300--Sobic005G152200 Sobic001G460400 Sobic001G460400 Sobic010G218300--Sobic001G460400 Sobic010G218300--Sobic002G283900 Sobic004G161900 Sobic004G161900 Sobic010G218300--Sobic004G161900 Sobic010G045400 Sobic010G045400 Sobic010G218300--Sobic010G045400 Sobic006G160900 Sobic006G160900 Sobic010G218300--Sobic006G160900 Sobic009G238900 Sobic009G238900 Sobic010G218300--Sobic009G238900 Sobic010G218300--Sobic008G191400 Sobic009G221500 Sobic009G221500 Sobic010G218300--Sobic009G221500 Sobic001G245800 Sobic001G245800 Sobic010G218300--Sobic001G245800 Sobic003G201200--Sobic003G078900 Sobic003G000200 Sobic003G000200 Sobic003G201200--Sobic003G000200 Sobic003G201200--Sobic009G221800 Sobic010G047600 Sobic010G047600 Sobic003G201200--Sobic010G047600 Sobic003G201200--Sobic001G261460 Sobic003G321400 Sobic003G321400 Sobic003G201200--Sobic003G321400 Sobic001G310300 Sobic001G310300 Sobic003G201200--Sobic001G310300 Sobic009G130300 Sobic009G130300 Sobic003G201200--Sobic009G130300 Sobic003G430800 Sobic003G430800 Sobic003G201200--Sobic003G430800 Sobic001G067800--Sobic005G219600 Sobic001G067800--Sobic001G218500 Sobic003G255600 Sobic003G255600 Sobic001G067800--Sobic003G255600 Sobic001G239200 Sobic001G239200 Sobic001G067800--Sobic001G239200 Sobic004G193500 Sobic004G193500 Sobic001G067800--Sobic004G193500 Sobic009G079900 Sobic009G079900 Sobic001G067800--Sobic009G079900 Sobic003G079100 Sobic003G079100 Sobic001G067800--Sobic003G079100 Sobic002G029600 Sobic002G029600 Sobic001G067800--Sobic002G029600 Sobic003G020500 Sobic003G020500 Sobic001G067800--Sobic003G020500 Sobic003G269100 Sobic003G269100 Sobic010G276700--Sobic003G269100 Sobic010G276700--Sobic001G067800 Sobic008G114000 Sobic008G114000 Sobic010G276700--Sobic008G114000 Sobic010G276700--Sobic002G283900 Sobic010G276700--Sobic005G219600 Sobic006G096500 Sobic006G096500 Sobic010G276700--Sobic006G096500 Sobic010G276700--Sobic003G231600 Sobic009G008800 Sobic009G008800 Sobic010G276700--Sobic009G008800 Sobic001G099600 Sobic001G099600 Sobic010G276700--Sobic001G099600 Sobic009G221800--Sobic003G078900 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic009G221800--Sobic001G261460 Sobic009G221800--Sobic003G000200 Sobic001G514200 Sobic001G514200 Sobic009G221800--Sobic001G514200 Sobic001G264300 Sobic001G264300 Sobic009G221800--Sobic001G264300 Sobic009G221800--Sobic009G130300 Sobic001G264400 Sobic001G264400 Sobic009G221800--Sobic001G264400 Sobic003G078900--Sobic009G221800 Sobic003G078900--Sobic003G000200 Sobic003G078900--Sobic003G321400 Sobic003G078900--Sobic010G047600 Sobic003G078900--Sobic003G201200 Sobic003G078900--Sobic001G261460 Sobic003G078900--Sobic009G130300 Sobic003G078900--Sobic001G514200 Sobic004G050700 Sobic004G050700 Sobic003G078900--Sobic004G050700
Octagon: transcription factors


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