Gene annotation
Transcriptome id Sobic.003G231600.1
Synonym Sb03g028940
Functional annotation CBS domain containing membrane protein, putative, expressed
UniProt C5XEH8
Pfam PF00571
Panther DB PTHR11911 PTHR11911:SF94
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G10860 : Cystathionine beta-synthase (CBS) family protein
RAP-DB (Rice) LOC_Os01g44360.1 : CBS domain containing membrane protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT72454 , PNT72452 , PNT72453 , KQK08885 , PNT72451 , PNT72450 , PNT72449 , KQK08886
Barley HORVU5Hr1G012770.7 , HORVU5Hr1G012770.4 , HORVU5Hr1G012770.6 , HORVU5Hr1G012770.5 , HORVU5Hr1G012770.2 , HORVU5Hr1G012770.3 , HORVU5Hr1G012770.1 , HORVU5Hr1G012770.8
Wheat TraesCS5A02G053000 , TraesCS5B02G063400 , TraesCS5D02G064300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G261460 - -
2 Sobic.002G283900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
4 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
5 Sobic.007G047500 B3 DNA binding domain containing protein, expressed -
6 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
7 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
8 Sobic.001G067100 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
9 Sobic.003G426500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.001G360400 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
12 Sobic.002G216100 cytochrome P450, putative, expressed -
13 Sobic.009G074500 expressed protein -
14 Sobic.005G061200 dirigent, putative, expressed -
15 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
16 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
17 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
18 Sobic.005G219600 protein kinase domain containing protein, expressed -
19 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.007G008600 GLTP domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G231600 Sobic003G231600 Sobic001G261460 Sobic001G261460 Sobic003G231600--Sobic001G261460 Sobic002G283900 Sobic002G283900 Sobic003G231600--Sobic002G283900 Sobic009G221800 Sobic009G221800 Sobic003G231600--Sobic009G221800 Sobic010G113100 Sobic010G113100 Sobic003G231600--Sobic010G113100 Sobic007G047500 Sobic007G047500 Sobic003G231600--Sobic007G047500 Sobic007G100700 Sobic007G100700 Sobic003G231600--Sobic007G100700 Sobic008G011700 Sobic008G011700 Sobic003G231600--Sobic008G011700 Sobic001G067100 Sobic001G067100 Sobic003G231600--Sobic001G067100 Sobic003G426500 Sobic003G426500 Sobic003G231600--Sobic003G426500 Sobic010G047600 Sobic010G047600 Sobic001G261460--Sobic010G047600 Sobic001G514200 Sobic001G514200 Sobic001G261460--Sobic001G514200 Sobic001G046800 Sobic001G046800 Sobic001G261460--Sobic001G046800 Sobic001G261460--Sobic009G221800 Sobic003G000200 Sobic003G000200 Sobic001G261460--Sobic003G000200 Sobic003G321400 Sobic003G321400 Sobic001G261460--Sobic003G321400 Sobic005G061200 Sobic005G061200 Sobic001G261460--Sobic005G061200 Sobic003G115200 Sobic003G115200 Sobic001G261460--Sobic003G115200 Sobic010G014400 Sobic010G014400 Sobic001G261460--Sobic010G014400 Sobic002G283900--Sobic003G231600 Sobic005G219600 Sobic005G219600 Sobic002G283900--Sobic005G219600 Sobic001G067800 Sobic001G067800 Sobic002G283900--Sobic001G067800 Sobic001G302500 Sobic001G302500 Sobic002G283900--Sobic001G302500 Sobic010G218300 Sobic010G218300 Sobic002G283900--Sobic010G218300 Sobic008G191400 Sobic008G191400 Sobic002G283900--Sobic008G191400 Sobic003G273700 Sobic003G273700 Sobic002G283900--Sobic003G273700 Sobic001G227850 Sobic001G227850 Sobic002G283900--Sobic001G227850 Sobic001G218500 Sobic001G218500 Sobic002G283900--Sobic001G218500 Sobic003G078900 Sobic003G078900 Sobic009G221800--Sobic003G078900 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic009G221800--Sobic001G261460 Sobic009G221800--Sobic003G000200 Sobic009G221800--Sobic001G514200 Sobic001G264300 Sobic001G264300 Sobic009G221800--Sobic001G264300 Sobic009G130300 Sobic009G130300 Sobic009G221800--Sobic009G130300 Sobic001G264400 Sobic001G264400 Sobic009G221800--Sobic001G264400 Sobic002G101400 Sobic002G101400 Sobic010G113100--Sobic002G101400 Sobic010G028100 Sobic010G028100 Sobic010G113100--Sobic010G028100 Sobic006G092700 Sobic006G092700 Sobic010G113100--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic010G113100--Sobic008G164450 Sobic006G135300 Sobic006G135300 Sobic010G113100--Sobic006G135300 Sobic007G057400 Sobic007G057400 Sobic010G113100--Sobic007G057400 Sobic002G216100 Sobic002G216100 Sobic010G113100--Sobic002G216100 Sobic001G506800 Sobic001G506800 Sobic010G113100--Sobic001G506800 Sobic001G360500 Sobic001G360500 Sobic010G113100--Sobic001G360500 Sobic001G360400 Sobic001G360400 Sobic007G047500--Sobic001G360400 Sobic010G070300 Sobic010G070300 Sobic007G047500--Sobic010G070300 Sobic007G047500--Sobic010G113100 Sobic007G030501 Sobic007G030501 Sobic007G047500--Sobic007G030501 Sobic004G212600 Sobic004G212600 Sobic007G047500--Sobic004G212600 Sobic010G206800 Sobic010G206800 Sobic007G047500--Sobic010G206800 Sobic003G351600 Sobic003G351600 Sobic007G047500--Sobic003G351600 Sobic010G204200 Sobic010G204200 Sobic007G047500--Sobic010G204200 Sobic007G021900 Sobic007G021900 Sobic007G047500--Sobic007G021900 Sobic003G182200 Sobic003G182200 Sobic007G100700--Sobic003G182200 Sobic007G100700--Sobic003G426500 Sobic007G008600 Sobic007G008600 Sobic007G100700--Sobic007G008600 Sobic002G255000 Sobic002G255000 Sobic007G100700--Sobic002G255000 Sobic007G100700--Sobic008G011700 Sobic010G066800 Sobic010G066800 Sobic007G100700--Sobic010G066800 Sobic006G106900 Sobic006G106900 Sobic007G100700--Sobic006G106900 Sobic003G064800 Sobic003G064800 Sobic007G100700--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic007G100700--Sobic004G306900 Sobic008G011700--Sobic007G100700 Sobic008G011700--Sobic003G426500 Sobic008G011700--Sobic001G067100 Sobic008G011700--Sobic003G182200 Sobic008G011700--Sobic010G066800 Sobic008G011700--Sobic002G255000 Sobic003G349400 Sobic003G349400 Sobic008G011700--Sobic003G349400 Sobic003G140700 Sobic003G140700 Sobic008G011700--Sobic003G140700 Sobic008G011700--Sobic004G306900 Sobic001G067100--Sobic008G011700 Sobic001G067100--Sobic003G426500 Sobic003G203600 Sobic003G203600 Sobic001G067100--Sobic003G203600 Sobic001G067100--Sobic007G100700 Sobic001G067100--Sobic003G182200 Sobic002G185800 Sobic002G185800 Sobic001G067100--Sobic002G185800 Sobic001G067100--Sobic010G066800 Sobic003G228600 Sobic003G228600 Sobic001G067100--Sobic003G228600 Sobic007G165400 Sobic007G165400 Sobic001G067100--Sobic007G165400 Sobic003G426500--Sobic007G100700 Sobic003G426500--Sobic003G182200 Sobic003G426500--Sobic008G011700 Sobic003G426500--Sobic010G066800 Sobic003G426500--Sobic001G067100 Sobic002G068000 Sobic002G068000 Sobic003G426500--Sobic002G068000 Sobic009G259800 Sobic009G259800 Sobic003G426500--Sobic009G259800 Sobic010G158400 Sobic010G158400 Sobic003G426500--Sobic010G158400 Sobic003G426500--Sobic003G349400
Octagon: transcription factors


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