Gene annotation
Transcriptome id Sobic.005G110457.1
Synonym -
Functional annotation -
UniProt C6JRJ6
Pfam PF14310 PF00933 PF01915
Panther DB PTHR30620 PTHR30620:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G78060 : Glycosyl hydrolase family protein
RAP-DB (Rice) LOC_Os11g19210.1 : beta-D-xylosidase, putative, expressed
MaizeGDB (Corn) Zm00025a012599 , Zm00025a029154 , Zm00025a033705 , Zm00025a033706
Brachypodium PNT63716
Barley HORVU4Hr1G003910.1 , HORVU4Hr1G003910.2 , HORVU4Hr1G012330.11 , HORVU4Hr1G012330.10 , HORVU4Hr1G012330.3 , HORVU4Hr1G012330.2 , HORVU4Hr1G012330.1 , HORVU4Hr1G012330.7 , HORVU4Hr1G012330.6 , HORVU4Hr1G012330.5 , HORVU4Hr1G012330.4 , HORVU4Hr1G012330.9
Wheat TraesCS4D02G072800 , TraesCS4B02G026100 , TraesCS4A02G288700 , TraesCS4A02G240900 , TraesCS4B02G074100 , TraesCS4B02G074100 , TraesCS4D02G023500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G265800 hsp20/alpha crystallin family protein, putative, expressed -
2 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
3 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
4 Sobic.002G283900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.008G114000 expressed protein -
6 Sobic.003G078900 reticulon domain containing protein, putative, expressed -
7 Sobic.001G264300 hsp20/alpha crystallin family protein, putative, expressed -
8 Sobic.010G022500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
9 Sobic.001G099600 ankyrin repeat family protein, putative, expressed -
10 Sobic.003G231600 CBS domain containing membrane protein, putative, expressed -
11 Sobic.003G388300 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
12 Sobic.006G119000 X8 domain containing protein, expressed -
13 Sobic.003G201200 hsp20/alpha crystallin family protein, putative, expressed -
14 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.007G196300 ubiquitin-associated protein, putative, expressed -
16 Sobic.002G075600 thaumatin, putative, expressed -
17 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
18 Sobic.010G276700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
19 Sobic.001G302500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
20 Sobic.006G030200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic005G110457 Sobic005G110457 Sobic001G265800 Sobic001G265800 Sobic005G110457--Sobic001G265800 Sobic001G264400 Sobic001G264400 Sobic005G110457--Sobic001G264400 Sobic009G221800 Sobic009G221800 Sobic005G110457--Sobic009G221800 Sobic002G283900 Sobic002G283900 Sobic005G110457--Sobic002G283900 Sobic008G114000 Sobic008G114000 Sobic005G110457--Sobic008G114000 Sobic003G078900 Sobic003G078900 Sobic005G110457--Sobic003G078900 Sobic001G264300 Sobic001G264300 Sobic005G110457--Sobic001G264300 Sobic010G022500 Sobic010G022500 Sobic005G110457--Sobic010G022500 Sobic001G099600 Sobic001G099600 Sobic005G110457--Sobic001G099600 Sobic001G265800--Sobic001G264400 Sobic001G265800--Sobic009G221800 Sobic003G321400 Sobic003G321400 Sobic001G265800--Sobic003G321400 Sobic001G265800--Sobic001G264300 Sobic001G265800--Sobic001G099600 Sobic001G265800--Sobic003G078900 Sobic003G269100 Sobic003G269100 Sobic001G265800--Sobic003G269100 Sobic010G047600 Sobic010G047600 Sobic001G265800--Sobic010G047600 Sobic004G170800 Sobic004G170800 Sobic001G265800--Sobic004G170800 Sobic001G264400--Sobic001G265800 Sobic001G264400--Sobic003G321400 Sobic001G264400--Sobic009G221800 Sobic001G264400--Sobic001G264300 Sobic001G264400--Sobic003G269100 Sobic001G264400--Sobic001G099600 Sobic008G077300 Sobic008G077300 Sobic001G264400--Sobic008G077300 Sobic001G264400--Sobic004G170800 Sobic004G156900 Sobic004G156900 Sobic001G264400--Sobic004G156900 Sobic009G221800--Sobic003G078900 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic009G221800--Sobic001G261460 Sobic003G000200 Sobic003G000200 Sobic009G221800--Sobic003G000200 Sobic001G514200 Sobic001G514200 Sobic009G221800--Sobic001G514200 Sobic009G221800--Sobic001G264300 Sobic009G130300 Sobic009G130300 Sobic009G221800--Sobic009G130300 Sobic009G221800--Sobic001G264400 Sobic003G231600 Sobic003G231600 Sobic002G283900--Sobic003G231600 Sobic005G219600 Sobic005G219600 Sobic002G283900--Sobic005G219600 Sobic001G067800 Sobic001G067800 Sobic002G283900--Sobic001G067800 Sobic001G302500 Sobic001G302500 Sobic002G283900--Sobic001G302500 Sobic010G218300 Sobic010G218300 Sobic002G283900--Sobic010G218300 Sobic008G191400 Sobic008G191400 Sobic002G283900--Sobic008G191400 Sobic003G273700 Sobic003G273700 Sobic002G283900--Sobic003G273700 Sobic001G227850 Sobic001G227850 Sobic002G283900--Sobic001G227850 Sobic001G218500 Sobic001G218500 Sobic002G283900--Sobic001G218500 Sobic002G016400 Sobic002G016400 Sobic008G114000--Sobic002G016400 Sobic008G114000--Sobic001G264400 Sobic008G113900 Sobic008G113900 Sobic008G114000--Sobic008G113900 Sobic007G208100 Sobic007G208100 Sobic008G114000--Sobic007G208100 Sobic008G114000--Sobic003G269100 Sobic004G297950 Sobic004G297950 Sobic008G114000--Sobic004G297950 Sobic001G382700 Sobic001G382700 Sobic008G114000--Sobic001G382700 Sobic008G114000--Sobic001G099600 Sobic009G061400 Sobic009G061400 Sobic008G114000--Sobic009G061400 Sobic003G078900--Sobic009G221800 Sobic003G078900--Sobic003G000200 Sobic003G078900--Sobic003G321400 Sobic003G078900--Sobic010G047600 Sobic003G201200 Sobic003G201200 Sobic003G078900--Sobic003G201200 Sobic003G078900--Sobic001G261460 Sobic003G078900--Sobic009G130300 Sobic003G078900--Sobic001G514200 Sobic004G050700 Sobic004G050700 Sobic003G078900--Sobic004G050700 Sobic001G264300--Sobic009G221800 Sobic001G264300--Sobic003G321400 Sobic001G264300--Sobic010G047600 Sobic001G264300--Sobic001G264400 Sobic001G264300--Sobic004G050700 Sobic001G264300--Sobic003G078900 Sobic001G264300--Sobic001G514200 Sobic001G264300--Sobic004G170800 Sobic001G264300--Sobic001G261460 Sobic002G226500 Sobic002G226500 Sobic010G022500--Sobic002G226500 Sobic010G022500--Sobic009G221800 Sobic010G022500--Sobic001G264400 Sobic010G022500--Sobic008G113900 Sobic003G121000 Sobic003G121000 Sobic010G022500--Sobic003G121000 Sobic010G022500--Sobic001G264300 Sobic010G022500--Sobic003G321400 Sobic003G115200 Sobic003G115200 Sobic010G022500--Sobic003G115200 Sobic010G022500--Sobic009G130300 Sobic001G099600--Sobic003G269100 Sobic001G099600--Sobic003G321400 Sobic001G099600--Sobic001G264400 Sobic001G099600--Sobic004G297950 Sobic001G099600--Sobic001G265800 Sobic001G099600--Sobic003G115200 Sobic001G099600--Sobic009G221800 Sobic001G099600--Sobic010G047600 Sobic001G099600--Sobic003G000200
Octagon: transcription factors


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