Gene annotation
Transcriptome id Sobic.001G265800.1
Synonym Sb01g025960
Functional annotation hsp20/alpha crystallin family protein, putative, expressed
UniProt C5WP13
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF124
NCBI CDD KOG3591; Alpha crystallins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g17660.1 : expressed protein
MaizeGDB (Corn) Zm00025a003796
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
2 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
3 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.001G264300 hsp20/alpha crystallin family protein, putative, expressed -
5 Sobic.001G099600 ankyrin repeat family protein, putative, expressed -
6 Sobic.003G078900 reticulon domain containing protein, putative, expressed -
7 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
8 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
9 Sobic.004G170800 serine-aspartate repeat-containing protein I precursor, putative, expressed -
10 Sobic.001G245800 expressed protein -
11 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
13 Sobic.008G114000 expressed protein -
14 Sobic.001G261460 - -
15 Sobic.003G115200 expressed protein -
16 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.001G514300 Glutathione S-transferase("PubMedID : 26759170,PubMedID : 24597475")@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.004G156900 OsGrx_C8 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
19 Sobic.010G014400 - -
20 Sobic.008G135300 thaumatin family domain containing protein, expressed -


Gene co-expression network
sample Sobic001G265800 Sobic001G265800 Sobic001G264400 Sobic001G264400 Sobic001G265800--Sobic001G264400 Sobic009G221800 Sobic009G221800 Sobic001G265800--Sobic009G221800 Sobic003G321400 Sobic003G321400 Sobic001G265800--Sobic003G321400 Sobic001G264300 Sobic001G264300 Sobic001G265800--Sobic001G264300 Sobic001G099600 Sobic001G099600 Sobic001G265800--Sobic001G099600 Sobic003G078900 Sobic003G078900 Sobic001G265800--Sobic003G078900 Sobic003G269100 Sobic003G269100 Sobic001G265800--Sobic003G269100 Sobic010G047600 Sobic010G047600 Sobic001G265800--Sobic010G047600 Sobic004G170800 Sobic004G170800 Sobic001G265800--Sobic004G170800 Sobic001G264400--Sobic001G265800 Sobic001G264400--Sobic003G321400 Sobic001G264400--Sobic009G221800 Sobic001G264400--Sobic001G264300 Sobic001G264400--Sobic003G269100 Sobic001G264400--Sobic001G099600 Sobic008G077300 Sobic008G077300 Sobic001G264400--Sobic008G077300 Sobic001G264400--Sobic004G170800 Sobic004G156900 Sobic004G156900 Sobic001G264400--Sobic004G156900 Sobic009G221800--Sobic003G078900 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic009G221800--Sobic001G261460 Sobic003G000200 Sobic003G000200 Sobic009G221800--Sobic003G000200 Sobic001G514200 Sobic001G514200 Sobic009G221800--Sobic001G514200 Sobic009G221800--Sobic001G264300 Sobic009G130300 Sobic009G130300 Sobic009G221800--Sobic009G130300 Sobic009G221800--Sobic001G264400 Sobic003G321400--Sobic003G269100 Sobic003G115200 Sobic003G115200 Sobic003G321400--Sobic003G115200 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G321400--Sobic003G000200 Sobic003G321400--Sobic003G078900 Sobic003G321400--Sobic001G261460 Sobic003G321400--Sobic001G264400 Sobic003G321400--Sobic001G099600 Sobic001G264300--Sobic009G221800 Sobic001G264300--Sobic003G321400 Sobic001G264300--Sobic010G047600 Sobic001G264300--Sobic001G264400 Sobic004G050700 Sobic004G050700 Sobic001G264300--Sobic004G050700 Sobic001G264300--Sobic003G078900 Sobic001G264300--Sobic001G514200 Sobic001G264300--Sobic004G170800 Sobic001G264300--Sobic001G261460 Sobic001G099600--Sobic003G269100 Sobic001G099600--Sobic003G321400 Sobic001G099600--Sobic001G264400 Sobic004G297950 Sobic004G297950 Sobic001G099600--Sobic004G297950 Sobic001G099600--Sobic001G265800 Sobic001G099600--Sobic003G115200 Sobic001G099600--Sobic009G221800 Sobic001G099600--Sobic010G047600 Sobic001G099600--Sobic003G000200 Sobic003G078900--Sobic009G221800 Sobic003G078900--Sobic003G000200 Sobic003G078900--Sobic003G321400 Sobic003G078900--Sobic010G047600 Sobic003G201200 Sobic003G201200 Sobic003G078900--Sobic003G201200 Sobic003G078900--Sobic001G261460 Sobic003G078900--Sobic009G130300 Sobic003G078900--Sobic001G514200 Sobic003G078900--Sobic004G050700 Sobic003G269100--Sobic003G321400 Sobic003G269100--Sobic001G099600 Sobic003G269100--Sobic004G297950 Sobic003G269100--Sobic003G115200 Sobic003G269100--Sobic010G047600 Sobic003G269100--Sobic001G261460 Sobic003G269100--Sobic001G264400 Sobic001G484000 Sobic001G484000 Sobic003G269100--Sobic001G484000 Sobic001G046800 Sobic001G046800 Sobic003G269100--Sobic001G046800 Sobic010G047600--Sobic001G261460 Sobic010G047600--Sobic001G046800 Sobic010G047600--Sobic003G321400 Sobic010G047600--Sobic009G221800 Sobic010G047600--Sobic001G514200 Sobic010G047600--Sobic003G078900 Sobic010G047600--Sobic003G000200 Sobic010G047600--Sobic003G115200 Sobic010G047600--Sobic004G050700 Sobic004G170800--Sobic001G264400 Sobic001G245800 Sobic001G245800 Sobic004G170800--Sobic001G245800 Sobic003G250700 Sobic003G250700 Sobic004G170800--Sobic003G250700 Sobic005G142500 Sobic005G142500 Sobic004G170800--Sobic005G142500 Sobic004G170800--Sobic003G115200 Sobic004G170800--Sobic009G221800 Sobic004G170800--Sobic001G264300 Sobic005G047100 Sobic005G047100 Sobic004G170800--Sobic005G047100 Sobic004G170800--Sobic003G321400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.