Gene annotation
Transcriptome id Sobic.002G075600.1
Synonym Sb02g006300
Functional annotation thaumatin, putative, expressed
UniProt C5XDA5
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G77700 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os04g59370.1 : thaumatin, putative, expressed
MaizeGDB (Corn) Zm00025a045375 , Zm00025a043524 , Zm00025a001537 , Zm00025a051051 , Zm00025a049347 , Zm00025a052993
Brachypodium KQJ87038 , KQK22773 , KQK22772
Barley HORVU4Hr1G066130.3 , HORVU4Hr1G066130.4 , HORVU3Hr1G035410.1 , HORVU5Hr1G112160.4 , HORVU5Hr1G112160.5 , HORVU5Hr1G112160.6 , HORVU5Hr1G112160.7 , HORVU5Hr1G112160.1 , HORVU5Hr1G112160.2 , HORVU5Hr1G112160.3 , HORVU6Hr1G024780.1 , HORVU6Hr1G024780.2 , HORVU2Hr1G125500.2 , HORVU2Hr1G125500.1 , HORVU4Hr1G027300.4 , HORVU4Hr1G027300.5 , HORVU4Hr1G027300.2 , HORVU4Hr1G027300.3 , HORVU4Hr1G027300.1 , HORVU1Hr1G005760.1
Wheat TraesCS4A02G070800 , TraesCS4A02G070800 , TraesCSU02G038100 , TraesCS5A02G472800 , TraesCS5D02G485500 , TraesCS4A02G177300 , TraesCS4B02G140500 , TraesCS2D02G581400 , TraesCS2D02G581400 , TraesCS4D02G135200 , TraesCS4B02G236700 , TraesCS5B02G485700 , TraesCS4D02G227500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
2 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.003G078900 reticulon domain containing protein, putative, expressed -
5 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
6 Sobic.010G106700 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
7 Sobic.002G053900 Cupin domain containing protein, expressed -
8 Sobic.001G261460 - -
9 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
10 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
11 Sobic.009G215000 - -
12 Sobic.003G115200 expressed protein -
13 Sobic.003G250700 fasciclin domain containing protein, expressed -
14 Sobic.010G080800 zinc finger family protein, putative, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
15 Sobic.003G201200 hsp20/alpha crystallin family protein, putative, expressed -
16 Sobic.001G264300 hsp20/alpha crystallin family protein, putative, expressed -
17 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.001G099600 ankyrin repeat family protein, putative, expressed -
19 Sobic.001G265800 hsp20/alpha crystallin family protein, putative, expressed -
20 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic002G075600 Sobic002G075600 Sobic010G047600 Sobic010G047600 Sobic002G075600--Sobic010G047600 Sobic001G046800 Sobic001G046800 Sobic002G075600--Sobic001G046800 Sobic003G321400 Sobic003G321400 Sobic002G075600--Sobic003G321400 Sobic003G078900 Sobic003G078900 Sobic002G075600--Sobic003G078900 Sobic009G221800 Sobic009G221800 Sobic002G075600--Sobic009G221800 Sobic010G106700 Sobic010G106700 Sobic002G075600--Sobic010G106700 Sobic002G053900 Sobic002G053900 Sobic002G075600--Sobic002G053900 Sobic001G261460 Sobic001G261460 Sobic002G075600--Sobic001G261460 Sobic003G000200 Sobic003G000200 Sobic002G075600--Sobic003G000200 Sobic010G047600--Sobic001G261460 Sobic010G047600--Sobic001G046800 Sobic010G047600--Sobic003G321400 Sobic010G047600--Sobic009G221800 Sobic001G514200 Sobic001G514200 Sobic010G047600--Sobic001G514200 Sobic010G047600--Sobic003G078900 Sobic010G047600--Sobic003G000200 Sobic003G115200 Sobic003G115200 Sobic010G047600--Sobic003G115200 Sobic004G050700 Sobic004G050700 Sobic010G047600--Sobic004G050700 Sobic001G046800--Sobic010G047600 Sobic001G046800--Sobic001G261460 Sobic001G046800--Sobic010G106700 Sobic001G046800--Sobic002G053900 Sobic009G008800 Sobic009G008800 Sobic001G046800--Sobic009G008800 Sobic001G484000 Sobic001G484000 Sobic001G046800--Sobic001G484000 Sobic010G014400 Sobic010G014400 Sobic001G046800--Sobic010G014400 Sobic001G046800--Sobic003G321400 Sobic003G250700 Sobic003G250700 Sobic001G046800--Sobic003G250700 Sobic003G269100 Sobic003G269100 Sobic003G321400--Sobic003G269100 Sobic003G321400--Sobic003G115200 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G321400--Sobic003G000200 Sobic003G321400--Sobic003G078900 Sobic003G321400--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G321400--Sobic001G264400 Sobic001G099600 Sobic001G099600 Sobic003G321400--Sobic001G099600 Sobic003G078900--Sobic009G221800 Sobic003G078900--Sobic003G000200 Sobic003G078900--Sobic003G321400 Sobic003G078900--Sobic010G047600 Sobic003G201200 Sobic003G201200 Sobic003G078900--Sobic003G201200 Sobic003G078900--Sobic001G261460 Sobic009G130300 Sobic009G130300 Sobic003G078900--Sobic009G130300 Sobic003G078900--Sobic001G514200 Sobic003G078900--Sobic004G050700 Sobic009G221800--Sobic003G078900 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic009G221800--Sobic001G261460 Sobic009G221800--Sobic003G000200 Sobic009G221800--Sobic001G514200 Sobic001G264300 Sobic001G264300 Sobic009G221800--Sobic001G264300 Sobic009G221800--Sobic009G130300 Sobic009G221800--Sobic001G264400 Sobic010G106700--Sobic001G046800 Sobic010G106700--Sobic009G008800 Sobic010G106700--Sobic002G053900 Sobic010G106700--Sobic010G047600 Sobic001G059500 Sobic001G059500 Sobic010G106700--Sobic001G059500 Sobic003G352700 Sobic003G352700 Sobic010G106700--Sobic003G352700 Sobic010G106700--Sobic001G261460 Sobic001G068500 Sobic001G068500 Sobic010G106700--Sobic001G068500 Sobic003G082700 Sobic003G082700 Sobic010G106700--Sobic003G082700 Sobic002G053900--Sobic001G046800 Sobic009G072800 Sobic009G072800 Sobic002G053900--Sobic009G072800 Sobic002G053900--Sobic009G008800 Sobic002G053900--Sobic010G106700 Sobic002G053900--Sobic010G047600 Sobic002G053900--Sobic001G484000 Sobic001G190500 Sobic001G190500 Sobic002G053900--Sobic001G190500 Sobic009G215000 Sobic009G215000 Sobic002G053900--Sobic009G215000 Sobic003G239100 Sobic003G239100 Sobic002G053900--Sobic003G239100 Sobic001G261460--Sobic010G047600 Sobic001G261460--Sobic001G514200 Sobic001G261460--Sobic001G046800 Sobic001G261460--Sobic009G221800 Sobic001G261460--Sobic003G000200 Sobic001G261460--Sobic003G321400 Sobic005G061200 Sobic005G061200 Sobic001G261460--Sobic005G061200 Sobic001G261460--Sobic003G115200 Sobic001G261460--Sobic010G014400 Sobic003G000200--Sobic009G130300 Sobic003G000200--Sobic003G321400 Sobic003G000200--Sobic003G078900 Sobic003G000200--Sobic001G261460 Sobic003G000200--Sobic009G221800 Sobic003G000200--Sobic003G115200 Sobic003G000200--Sobic010G047600 Sobic003G000200--Sobic003G201200 Sobic003G000200--Sobic003G250700
Octagon: transcription factors


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