Gene annotation
Transcriptome id Sobic.002G361200.1
Synonym Sb02g038140
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
sex determination protein tasselseed-2, putative, expressed
UniProt C5XD57
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF448
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03140 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os07g40250.1 : sex determination protein tasselseed-2, putative, expressed
MaizeGDB (Corn) Zm00025a048610 , Zm00025a049065
Brachypodium KQJ83231 , KQK15447
Barley HORVU2Hr1G015150.1 , HORVU2Hr1G015140.2 , HORVU2Hr1G015140.1 , HORVU2Hr1G034740.5 , HORVU2Hr1G034740.1 , HORVU2Hr1G034740.2 , HORVU2Hr1G034740.3
Wheat TraesCS2B02G145100 , TraesCS2A02G123000 , TraesCS2D02G125800 , TraesCS2B02G210900 , TraesCS2B02G143900 , TraesCS2D02G125900 , TraesCS2A02G122900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G274933 - -
2 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
3 Sobic.010G001000 expressed protein -
4 Sobic.007G090469 - -
5 Sobic.006G157900 C2 domain containing protein, putative, expressed -
6 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
7 Sobic.001G300500 expansin precursor, putative, expressed -
8 Sobic.003G417100 esterase, putative, expressed -
9 Sobic.010G252500 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSAUR28 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
10 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
14 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.006G197100 DNA binding protein, putative, expressed -
16 Sobic.001G062500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
17 Sobic.003G404600 regulatory protein, putative, expressed -
18 Sobic.010G195500 reductase, putative, expressed -
19 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
20 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic002G361200 Sobic002G361200 Sobic006G274933 Sobic006G274933 Sobic002G361200--Sobic006G274933 Sobic003G311800 Sobic003G311800 Sobic002G361200--Sobic003G311800 Sobic010G001000 Sobic010G001000 Sobic002G361200--Sobic010G001000 Sobic007G090469 Sobic007G090469 Sobic002G361200--Sobic007G090469 Sobic006G157900 Sobic006G157900 Sobic002G361200--Sobic006G157900 Sobic002G183700 Sobic002G183700 Sobic002G361200--Sobic002G183700 Sobic001G300500 Sobic001G300500 Sobic002G361200--Sobic001G300500 Sobic003G417100 Sobic003G417100 Sobic002G361200--Sobic003G417100 Sobic010G252500 Sobic010G252500 Sobic002G361200--Sobic010G252500 Sobic006G274933--Sobic002G183700 Sobic006G274933--Sobic003G311800 Sobic003G269600 Sobic003G269600 Sobic006G274933--Sobic003G269600 Sobic003G140700 Sobic003G140700 Sobic006G274933--Sobic003G140700 Sobic006G274933--Sobic002G361200 Sobic001G062500 Sobic001G062500 Sobic006G274933--Sobic001G062500 Sobic003G399600 Sobic003G399600 Sobic006G274933--Sobic003G399600 Sobic006G225500 Sobic006G225500 Sobic006G274933--Sobic006G225500 Sobic003G121100 Sobic003G121100 Sobic006G274933--Sobic003G121100 Sobic004G297900 Sobic004G297900 Sobic003G311800--Sobic004G297900 Sobic002G003800 Sobic002G003800 Sobic003G311800--Sobic002G003800 Sobic001G049900 Sobic001G049900 Sobic003G311800--Sobic001G049900 Sobic009G109000 Sobic009G109000 Sobic003G311800--Sobic009G109000 Sobic006G197100 Sobic006G197100 Sobic003G311800--Sobic006G197100 Sobic003G311800--Sobic006G274933 Sobic003G311800--Sobic002G183700 Sobic003G311800--Sobic007G090469 Sobic004G042000 Sobic004G042000 Sobic003G311800--Sobic004G042000 Sobic010G001000--Sobic004G042000 Sobic010G001000--Sobic006G157900 Sobic010G063000 Sobic010G063000 Sobic010G001000--Sobic010G063000 Sobic001G302600 Sobic001G302600 Sobic010G001000--Sobic001G302600 Sobic001G500000 Sobic001G500000 Sobic010G001000--Sobic001G500000 Sobic010G185000 Sobic010G185000 Sobic010G001000--Sobic010G185000 Sobic006G103000 Sobic006G103000 Sobic010G001000--Sobic006G103000 Sobic001G318500 Sobic001G318500 Sobic010G001000--Sobic001G318500 Sobic006G059700 Sobic006G059700 Sobic010G001000--Sobic006G059700 Sobic006G172601 Sobic006G172601 Sobic007G090469--Sobic006G172601 Sobic007G090469--Sobic004G297900 Sobic007G090469--Sobic003G311800 SobicK026900 SobicK026900 Sobic007G090469--SobicK026900 Sobic001G238300 Sobic001G238300 Sobic007G090469--Sobic001G238300 Sobic004G209400 Sobic004G209400 Sobic007G090469--Sobic004G209400 Sobic004G295100 Sobic004G295100 Sobic007G090469--Sobic004G295100 Sobic005G156500 Sobic005G156500 Sobic007G090469--Sobic005G156500 Sobic007G090469--Sobic001G300500 Sobic006G157900--Sobic010G001000 Sobic003G366600 Sobic003G366600 Sobic006G157900--Sobic003G366600 Sobic003G007600 Sobic003G007600 Sobic006G157900--Sobic003G007600 Sobic006G157900--Sobic006G103000 Sobic006G157900--Sobic003G311800 Sobic006G157900--Sobic001G302600 Sobic004G202400 Sobic004G202400 Sobic006G157900--Sobic004G202400 Sobic010G270500 Sobic010G270500 Sobic006G157900--Sobic010G270500 Sobic002G336700 Sobic002G336700 Sobic006G157900--Sobic002G336700 Sobic007G158800 Sobic007G158800 Sobic002G183700--Sobic007G158800 Sobic004G029100 Sobic004G029100 Sobic002G183700--Sobic004G029100 Sobic001G502000 Sobic001G502000 Sobic002G183700--Sobic001G502000 Sobic002G183700--Sobic003G140700 Sobic006G089000 Sobic006G089000 Sobic002G183700--Sobic006G089000 Sobic002G183700--Sobic006G274933 Sobic002G183700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic002G183700--Sobic004G322100 Sobic002G183700--Sobic003G311800 Sobic001G300500--Sobic004G297900 Sobic001G300500--Sobic003G311800 Sobic001G300500--Sobic004G295100 Sobic001G300500--Sobic007G090469 Sobic006G172550 Sobic006G172550 Sobic001G300500--Sobic006G172550 Sobic006G235200 Sobic006G235200 Sobic001G300500--Sobic006G235200 Sobic001G300500--Sobic001G238300 Sobic001G300500--Sobic006G172601 Sobic001G300500--SobicK026900 Sobic002G042200 Sobic002G042200 Sobic003G417100--Sobic002G042200 Sobic003G215200 Sobic003G215200 Sobic003G417100--Sobic003G215200 Sobic010G194100 Sobic010G194100 Sobic003G417100--Sobic010G194100 Sobic003G417100--Sobic006G274933 Sobic003G417100--Sobic006G197100 Sobic003G417100--Sobic003G140700 Sobic007G050200 Sobic007G050200 Sobic003G417100--Sobic007G050200 Sobic003G228600 Sobic003G228600 Sobic003G417100--Sobic003G228600 Sobic002G216100 Sobic002G216100 Sobic003G417100--Sobic002G216100 Sobic007G218800 Sobic007G218800 Sobic010G252500--Sobic007G218800 Sobic007G030501 Sobic007G030501 Sobic010G252500--Sobic007G030501 Sobic004G062500 Sobic004G062500 Sobic010G252500--Sobic004G062500 Sobic010G252500--Sobic002G003800 Sobic010G252500--Sobic006G197100 Sobic003G404600 Sobic003G404600 Sobic010G252500--Sobic003G404600 Sobic003G343900 Sobic003G343900 Sobic010G252500--Sobic003G343900 Sobic010G252500--Sobic003G311800 Sobic004G139300 Sobic004G139300 Sobic010G252500--Sobic004G139300
Octagon: transcription factors


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