Gene annotation
Transcriptome id Sobic.005G121200.1,Sobic.005G121200.2
Synonym ATHVA22E, Sb05g017940, HVA22E,
Functional annotation "similar to HVA22-like protein e, putative, expressed" (PubMedID : 29862293)
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
HVA22, putative, expressed
UniProt A0A1Z5RIN9 , C5Y2N2
Pfam PF03134
Panther DB PTHR12300 PTHR12300:SF56
NCBI CDD -
KEGG Orthology K17279; receptor expression-enhancing protein 5/6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24960 : HVA22 homologue E,HVA22 homologue D
RAP-DB (Rice) LOC_Os11g30500.1 : HVA22, putative, expressed
MaizeGDB (Corn) Zm00025a014045 , Zm00025a015649
Brachypodium -
Barley HORVU5Hr1G016810.3 , HORVU5Hr1G016810.2 , HORVU5Hr1G016810.1
Wheat TraesCS5B02G069300 , TraesCS5A02G063100 , TraesCS7D02G224100 , TraesCS7D02G224100 , TraesCS7A02G222500 , TraesCS7B02G129000 , TraesCS7B02G129000 , TraesCS7A02G222500 , TraesCS5D02G074300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G127800 nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
2 Sobic.001G460300 expressed protein -
3 Sobic.002G337800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.003G278700 heavy metal-associated domain containing protein, expressed -
5 Sobic.009G030200 homeobox protein knotted-1-like 6, putative, expressed -
6 Sobic.001G396400 expressed protein -
7 Sobic.003G198200 "similar to Protein phosphatase 2C, expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
8 Sobic.007G152800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutamate decarboxylase("PubMedID : 26759170,PubMedID : 24597475")@decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
9 Sobic.003G198150 - -
10 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
11 Sobic.003G129400 glycosyltransferase family 43 protein, putative, expressed K00735: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
12 Sobic.003G336100 auxin efflux carrier component, putative, expressed -
13 Sobic.004G321000 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
14 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.010G071700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
16 Sobic.005G061000 ABC-2 type transporter domain containing protein, expressed -
17 Sobic.010G165200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G245900 - -
19 Sobic.002G038733 - -
20 Sobic.002G193600 endoglucanase, putative, expressed -


Gene co-expression network
sample Sobic005G121200 Sobic005G121200 Sobic001G127800 Sobic001G127800 Sobic005G121200--Sobic001G127800 Sobic001G460300 Sobic001G460300 Sobic005G121200--Sobic001G460300 Sobic002G337800 Sobic002G337800 Sobic005G121200--Sobic002G337800 Sobic003G278700 Sobic003G278700 Sobic005G121200--Sobic003G278700 Sobic009G030200 Sobic009G030200 Sobic005G121200--Sobic009G030200 Sobic001G396400 Sobic001G396400 Sobic005G121200--Sobic001G396400 Sobic003G198200 Sobic003G198200 Sobic005G121200--Sobic003G198200 Sobic007G152800 Sobic007G152800 Sobic005G121200--Sobic007G152800 Sobic003G198150 Sobic003G198150 Sobic005G121200--Sobic003G198150 Sobic001G127800--Sobic005G121200 Sobic010G165200 Sobic010G165200 Sobic001G127800--Sobic010G165200 Sobic001G127800--Sobic007G152800 Sobic001G127800--Sobic002G337800 Sobic009G072200 Sobic009G072200 Sobic001G127800--Sobic009G072200 Sobic009G073000 Sobic009G073000 Sobic001G127800--Sobic009G073000 Sobic001G342600 Sobic001G342600 Sobic001G127800--Sobic001G342600 Sobic006G064800 Sobic006G064800 Sobic001G127800--Sobic006G064800 Sobic003G209600 Sobic003G209600 Sobic001G127800--Sobic003G209600 Sobic001G460300--Sobic003G278700 Sobic003G032900 Sobic003G032900 Sobic001G460300--Sobic003G032900 Sobic009G099000 Sobic009G099000 Sobic001G460300--Sobic009G099000 Sobic001G460300--Sobic005G121200 Sobic001G157400 Sobic001G157400 Sobic001G460300--Sobic001G157400 Sobic003G227600 Sobic003G227600 Sobic001G460300--Sobic003G227600 Sobic001G460300--Sobic002G337800 Sobic009G216900 Sobic009G216900 Sobic001G460300--Sobic009G216900 Sobic002G325900 Sobic002G325900 Sobic001G460300--Sobic002G325900 Sobic005G231700 Sobic005G231700 Sobic002G337800--Sobic005G231700 Sobic008G159100 Sobic008G159100 Sobic002G337800--Sobic008G159100 Sobic006G087900 Sobic006G087900 Sobic002G337800--Sobic006G087900 Sobic001G063600 Sobic001G063600 Sobic002G337800--Sobic001G063600 Sobic007G057100 Sobic007G057100 Sobic002G337800--Sobic007G057100 Sobic001G051800 Sobic001G051800 Sobic002G337800--Sobic001G051800 Sobic002G210300 Sobic002G210300 Sobic002G337800--Sobic002G210300 Sobic008G000500 Sobic008G000500 Sobic002G337800--Sobic008G000500 Sobic002G337800--Sobic005G121200 Sobic003G278700--Sobic009G099000 Sobic003G278700--Sobic001G157400 Sobic003G278700--Sobic001G460300 Sobic001G050800 Sobic001G050800 Sobic003G278700--Sobic001G050800 Sobic003G278700--Sobic005G231700 Sobic003G278700--Sobic009G030200 Sobic010G272101 Sobic010G272101 Sobic003G278700--Sobic010G272101 Sobic003G278700--Sobic001G063600 Sobic003G278700--Sobic003G227600 Sobic009G030200--Sobic001G050800 Sobic009G030200--Sobic001G157400 Sobic009G030200--Sobic003G278700 Sobic010G071700 Sobic010G071700 Sobic009G030200--Sobic010G071700 Sobic009G030200--Sobic005G231700 Sobic009G030200--Sobic003G227600 Sobic003G342600 Sobic003G342600 Sobic009G030200--Sobic003G342600 Sobic009G159900 Sobic009G159900 Sobic009G030200--Sobic009G159900 Sobic006G032200 Sobic006G032200 Sobic009G030200--Sobic006G032200 Sobic007G018550 Sobic007G018550 Sobic001G396400--Sobic007G018550 Sobic010G035900 Sobic010G035900 Sobic001G396400--Sobic010G035900 Sobic001G132800 Sobic001G132800 Sobic001G396400--Sobic001G132800 Sobic001G396400--Sobic005G121200 Sobic009G027800 Sobic009G027800 Sobic001G396400--Sobic009G027800 Sobic004G257800 Sobic004G257800 Sobic001G396400--Sobic004G257800 Sobic002G112300 Sobic002G112300 Sobic001G396400--Sobic002G112300 Sobic005G115800 Sobic005G115800 Sobic001G396400--Sobic005G115800 Sobic003G019700 Sobic003G019700 Sobic001G396400--Sobic003G019700 Sobic003G198200--Sobic003G198150 Sobic004G170032 Sobic004G170032 Sobic003G198200--Sobic004G170032 Sobic001G450800 Sobic001G450800 Sobic003G198200--Sobic001G450800 Sobic002G148700 Sobic002G148700 Sobic003G198200--Sobic002G148700 Sobic003G198200--Sobic003G227600 Sobic004G337900 Sobic004G337900 Sobic003G198200--Sobic004G337900 Sobic008G029300 Sobic008G029300 Sobic003G198200--Sobic008G029300 Sobic004G353600 Sobic004G353600 Sobic003G198200--Sobic004G353600 Sobic002G387200 Sobic002G387200 Sobic003G198200--Sobic002G387200 Sobic007G152800--Sobic010G165200 Sobic007G152800--Sobic005G121200 Sobic007G152800--Sobic001G127800 Sobic001G048900 Sobic001G048900 Sobic007G152800--Sobic001G048900 Sobic002G359000 Sobic002G359000 Sobic007G152800--Sobic002G359000 Sobic008G087500 Sobic008G087500 Sobic007G152800--Sobic008G087500 Sobic003G244100 Sobic003G244100 Sobic007G152800--Sobic003G244100 Sobic007G152800--Sobic009G072200 Sobic002G173800 Sobic002G173800 Sobic007G152800--Sobic002G173800 Sobic008G044750 Sobic008G044750 Sobic003G198150--Sobic008G044750 Sobic003G198150--Sobic003G198200 Sobic009G128300 Sobic009G128300 Sobic003G198150--Sobic009G128300 Sobic001G509400 Sobic001G509400 Sobic003G198150--Sobic001G509400 Sobic003G079800 Sobic003G079800 Sobic003G198150--Sobic003G079800 Sobic003G198150--Sobic003G227600 Sobic003G198150--Sobic004G170032 Sobic003G233900 Sobic003G233900 Sobic003G198150--Sobic003G233900 Sobic003G198150--Sobic001G450800
Octagon: transcription factors


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