Gene annotation
Transcriptome id Sobic.003G105700.1
Synonym Sb03g008870
Functional annotation stress responsive protein, putative, expressed
UniProt A0A1W0VWQ0
Pfam PF14200
Panther DB PTHR31257 PTHR31257:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39050 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os01g01450.1 : stress responsive protein, putative, expressed
MaizeGDB (Corn) Zm00025a023840
Brachypodium -
Barley -
Wheat TraesCS3D02G078600 , TraesCS3A02G078100 , TraesCS3A02G078100 , TraesCS3A02G078200 , TraesCS3D02G078700
Populus -


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cDNA sequences
Sobic.003G105700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G186500 N-rich protein, putative, expressed -
2 Sobic.001G356800 ZOS9-11 - C2H2 zinc finger protein, expressed -
3 Sobic.004G162200 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
4 Sobic.007G044300 similar to Os08g0155400 protein(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
5 Sobic.010G258500 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed -
6 Sobic.009G171100 prenylated rab acceptor, putative, expressed -
7 Sobic.004G259500 expressed protein -
8 Sobic.007G178200 ER lumen protein retaining receptor, putative, expressed -
9 Sobic.006G220200 CPuORF12 - conserved peptide uORF-containing transcript, expressed K17839: PAO4, PAO3, polyamine oxidase
10 Sobic.001G436000 expressed protein -
11 Sobic.002G321500 ras-related protein, putative, expressed K07976: Rab family, other
12 Sobic.005G142101 - K19042: E3 ubiquitin-protein ligase BOI and related proteins
13 Sobic.007G137400 CSLA11 - cellulose synthase-like family A, expressed K13680: beta-mannan synthase
14 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
15 Sobic.010G178800 solute carrier family 35 member B1, putative, expressed K15275: solute carrier family 35 (UDP-galactose transporter), member B1
16 Sobic.001G217000 DUF584 domain containing protein, putative, expressed -
17 Sobic.001G441000 erwinia induced protein 2, putative, expressed -
18 Sobic.010G185600 phospholipase D, putative, expressed K01115: phospholipase D1/2
19 Sobic.003G253500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
20 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2


Gene co-expression network
sample Sobic003G105700 Sobic003G105700 Sobic003G186500 Sobic003G186500 Sobic003G105700--Sobic003G186500 Sobic001G356800 Sobic001G356800 Sobic003G105700--Sobic001G356800 Sobic004G162200 Sobic004G162200 Sobic003G105700--Sobic004G162200 Sobic007G044300 Sobic007G044300 Sobic003G105700--Sobic007G044300 Sobic010G258500 Sobic010G258500 Sobic003G105700--Sobic010G258500 Sobic009G171100 Sobic009G171100 Sobic003G105700--Sobic009G171100 Sobic004G259500 Sobic004G259500 Sobic003G105700--Sobic004G259500 Sobic007G178200 Sobic007G178200 Sobic003G105700--Sobic007G178200 Sobic006G220200 Sobic006G220200 Sobic003G105700--Sobic006G220200 Sobic001G051600 Sobic001G051600 Sobic003G186500--Sobic001G051600 Sobic001G462800 Sobic001G462800 Sobic003G186500--Sobic001G462800 Sobic001G489600 Sobic001G489600 Sobic003G186500--Sobic001G489600 Sobic001G081600 Sobic001G081600 Sobic003G186500--Sobic001G081600 Sobic006G095600 Sobic006G095600 Sobic003G186500--Sobic006G095600 Sobic002G294600 Sobic002G294600 Sobic003G186500--Sobic002G294600 Sobic001G476400 Sobic001G476400 Sobic003G186500--Sobic001G476400 Sobic004G025000 Sobic004G025000 Sobic003G186500--Sobic004G025000 Sobic001G314700 Sobic001G314700 Sobic003G186500--Sobic001G314700 Sobic001G356800--Sobic003G105700 Sobic001G356800--Sobic001G489600 Sobic006G211400 Sobic006G211400 Sobic001G356800--Sobic006G211400 Sobic010G183500 Sobic010G183500 Sobic001G356800--Sobic010G183500 Sobic006G103900 Sobic006G103900 Sobic001G356800--Sobic006G103900 Sobic001G356800--Sobic010G258500 Sobic008G077600 Sobic008G077600 Sobic001G356800--Sobic008G077600 Sobic009G243400 Sobic009G243400 Sobic001G356800--Sobic009G243400 Sobic001G017100 Sobic001G017100 Sobic001G356800--Sobic001G017100 Sobic001G075800 Sobic001G075800 Sobic004G162200--Sobic001G075800 Sobic006G263100 Sobic006G263100 Sobic004G162200--Sobic006G263100 Sobic009G169400 Sobic009G169400 Sobic004G162200--Sobic009G169400 Sobic004G300300 Sobic004G300300 Sobic004G162200--Sobic004G300300 Sobic009G167000 Sobic009G167000 Sobic004G162200--Sobic009G167000 Sobic009G030600 Sobic009G030600 Sobic004G162200--Sobic009G030600 Sobic004G268700 Sobic004G268700 Sobic004G162200--Sobic004G268700 Sobic001G050800 Sobic001G050800 Sobic004G162200--Sobic001G050800 Sobic002G188700 Sobic002G188700 Sobic004G162200--Sobic002G188700 Sobic001G343900 Sobic001G343900 Sobic007G044300--Sobic001G343900 Sobic007G196600 Sobic007G196600 Sobic007G044300--Sobic007G196600 Sobic003G369500 Sobic003G369500 Sobic007G044300--Sobic003G369500 Sobic007G006600 Sobic007G006600 Sobic007G044300--Sobic007G006600 Sobic001G162100 Sobic001G162100 Sobic007G044300--Sobic001G162100 Sobic001G410100 Sobic001G410100 Sobic007G044300--Sobic001G410100 Sobic006G265000 Sobic006G265000 Sobic007G044300--Sobic006G265000 Sobic001G216300 Sobic001G216300 Sobic007G044300--Sobic001G216300 Sobic002G333600 Sobic002G333600 Sobic007G044300--Sobic002G333600 Sobic008G178800 Sobic008G178800 Sobic010G258500--Sobic008G178800 Sobic006G038200 Sobic006G038200 Sobic010G258500--Sobic006G038200 Sobic003G216500 Sobic003G216500 Sobic010G258500--Sobic003G216500 Sobic004G182500 Sobic004G182500 Sobic010G258500--Sobic004G182500 Sobic009G232200 Sobic009G232200 Sobic010G258500--Sobic009G232200 Sobic007G130800 Sobic007G130800 Sobic010G258500--Sobic007G130800 Sobic002G075500 Sobic002G075500 Sobic010G258500--Sobic002G075500 Sobic006G237200 Sobic006G237200 Sobic010G258500--Sobic006G237200 Sobic001G436100 Sobic001G436100 Sobic010G258500--Sobic001G436100 Sobic001G525400 Sobic001G525400 Sobic009G171100--Sobic001G525400 Sobic001G441000 Sobic001G441000 Sobic009G171100--Sobic001G441000 Sobic003G253500 Sobic003G253500 Sobic009G171100--Sobic003G253500 Sobic009G171100--Sobic004G259500 Sobic001G408100 Sobic001G408100 Sobic009G171100--Sobic001G408100 Sobic007G188100 Sobic007G188100 Sobic009G171100--Sobic007G188100 Sobic002G353400 Sobic002G353400 Sobic009G171100--Sobic002G353400 Sobic003G392200 Sobic003G392200 Sobic009G171100--Sobic003G392200 Sobic009G182200 Sobic009G182200 Sobic009G171100--Sobic009G182200 Sobic004G259500--Sobic007G188100 Sobic004G259500--Sobic009G171100 Sobic004G259500--Sobic002G353400 Sobic003G425200 Sobic003G425200 Sobic004G259500--Sobic003G425200 Sobic003G294400 Sobic003G294400 Sobic004G259500--Sobic003G294400 Sobic004G259500--Sobic001G525400 Sobic002G379400 Sobic002G379400 Sobic004G259500--Sobic002G379400 Sobic008G016900 Sobic008G016900 Sobic004G259500--Sobic008G016900 Sobic004G278000 Sobic004G278000 Sobic004G259500--Sobic004G278000 Sobic007G178200--Sobic003G392200 Sobic001G416600 Sobic001G416600 Sobic007G178200--Sobic001G416600 Sobic007G178200--Sobic004G025000 Sobic007G178200--Sobic008G016900 Sobic003G361300 Sobic003G361300 Sobic007G178200--Sobic003G361300 Sobic009G134600 Sobic009G134600 Sobic007G178200--Sobic009G134600 Sobic004G245900 Sobic004G245900 Sobic007G178200--Sobic004G245900 Sobic002G330300 Sobic002G330300 Sobic007G178200--Sobic002G330300 Sobic010G071700 Sobic010G071700 Sobic007G178200--Sobic010G071700 Sobic006G220300 Sobic006G220300 Sobic006G220200--Sobic006G220300 Sobic010G092600 Sobic010G092600 Sobic006G220200--Sobic010G092600 Sobic001G391300 Sobic001G391300 Sobic006G220200--Sobic001G391300 Sobic002G148700 Sobic002G148700 Sobic006G220200--Sobic002G148700 Sobic002G216400 Sobic002G216400 Sobic006G220200--Sobic002G216400 Sobic001G496300 Sobic001G496300 Sobic006G220200--Sobic001G496300 Sobic003G238000 Sobic003G238000 Sobic006G220200--Sobic003G238000 Sobic001G110900 Sobic001G110900 Sobic006G220200--Sobic001G110900 Sobic009G155700 Sobic009G155700 Sobic006G220200--Sobic009G155700
Octagon: transcription factors


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