Gene annotation
Transcriptome id Sobic.002G321500.1
Synonym SGP1, ATSGP1
Functional annotation ras-related protein, putative, expressed
UniProt A0A1B6QEL0
Pfam PF00071
Panther DB PTHR24073 PTHR24073:SF515
NCBI CDD KOG1673; Ras GTPases
KEGG Orthology K07976; Rab family, other
Gene Ontology GO:0007264; small GTPase mediated signal transduction GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT5G54840 : Ras-related small GTP-binding family protein
RAP-DB (Rice) LOC_Os07g33850.2 : ras-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a048237 , Zm00025a014811
Brachypodium KQK15961
Barley HORVU2Hr1G045810.8 , HORVU2Hr1G045810.9 , HORVU2Hr1G045810.2 , HORVU2Hr1G045810.3 , HORVU2Hr1G045810.4 , HORVU2Hr1G045810.5 , HORVU2Hr1G045810.6 , HORVU2Hr1G045810.7 , HORVU2Hr1G045810.12 , HORVU2Hr1G045810.13 , HORVU2Hr1G045810.10 , HORVU2Hr1G045810.11 , HORVU2Hr1G045810.16 , HORVU2Hr1G045810.17 , HORVU2Hr1G045810.14 , HORVU2Hr1G045810.15 , HORVU2Hr1G045810.18 , HORVU0Hr1G004040.1
Wheat TraesCS2D02G226300 , TraesCS2A02G220600 , TraesCS2A02G220600 , TraesCS2B02G246100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G342500 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed -
2 Sobic.002G332100 expressed protein -
3 Sobic.010G253300 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor 19, putative, expressed -
4 Sobic.006G156600 transporter family protein, putative, expressed -
5 Sobic.008G043500 harpin-induced protein 1 domain containing protein, expressed -
6 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
7 Sobic.005G142101 - K19042: E3 ubiquitin-protein ligase BOI and related proteins
8 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
9 Sobic.010G248000 EDR2, putative, expressed -
10 Sobic.003G105700 stress responsive protein, putative, expressed -
11 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
12 Sobic.008G087400 - -
13 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
14 Sobic.008G003600 PMR5, putative, expressed -
15 Sobic.001G313301 - -
16 Sobic.004G172100 serine/threonine-protein kinase, putative, expressed -
17 Sobic.003G348800 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
18 Sobic.007G208000 geranylgeranyl transferase type-2 subunit beta, putative, expressed K05956: geranylgeranyl transferase type-2 subunit beta
19 Sobic.007G054500 ABC-2 type transporter domain containing protein, expressed -
20 Sobic.001G168500 serpin domain containing protein, putative, expressed K13963: serpin B


Gene co-expression network
sample Sobic002G321500 Sobic002G321500 Sobic002G342500 Sobic002G342500 Sobic002G321500--Sobic002G342500 Sobic002G332100 Sobic002G332100 Sobic002G321500--Sobic002G332100 Sobic010G253300 Sobic010G253300 Sobic002G321500--Sobic010G253300 Sobic006G156600 Sobic006G156600 Sobic002G321500--Sobic006G156600 Sobic008G043500 Sobic008G043500 Sobic002G321500--Sobic008G043500 Sobic003G353400 Sobic003G353400 Sobic002G321500--Sobic003G353400 Sobic005G142101 Sobic005G142101 Sobic002G321500--Sobic005G142101 Sobic009G182200 Sobic009G182200 Sobic002G321500--Sobic009G182200 Sobic010G248000 Sobic010G248000 Sobic002G321500--Sobic010G248000 Sobic001G338400 Sobic001G338400 Sobic002G342500--Sobic001G338400 Sobic005G074100 Sobic005G074100 Sobic002G342500--Sobic005G074100 Sobic001G145500 Sobic001G145500 Sobic002G342500--Sobic001G145500 Sobic003G348800 Sobic003G348800 Sobic002G342500--Sobic003G348800 Sobic001G322000 Sobic001G322000 Sobic002G342500--Sobic001G322000 Sobic006G179700 Sobic006G179700 Sobic002G342500--Sobic006G179700 Sobic007G013300 Sobic007G013300 Sobic002G342500--Sobic007G013300 Sobic007G161200 Sobic007G161200 Sobic002G342500--Sobic007G161200 Sobic003G053700 Sobic003G053700 Sobic002G342500--Sobic003G053700 Sobic002G075500 Sobic002G075500 Sobic002G332100--Sobic002G075500 Sobic001G436100 Sobic001G436100 Sobic002G332100--Sobic001G436100 Sobic004G212100 Sobic004G212100 Sobic002G332100--Sobic004G212100 Sobic002G332100--Sobic002G342500 Sobic001G196100 Sobic001G196100 Sobic002G332100--Sobic001G196100 Sobic002G332100--Sobic001G338400 Sobic001G116000 Sobic001G116000 Sobic002G332100--Sobic001G116000 Sobic010G060600 Sobic010G060600 Sobic002G332100--Sobic010G060600 Sobic002G332100--Sobic010G253300 Sobic001G031900 Sobic001G031900 Sobic010G253300--Sobic001G031900 Sobic004G257000 Sobic004G257000 Sobic010G253300--Sobic004G257000 Sobic006G058900 Sobic006G058900 Sobic010G253300--Sobic006G058900 Sobic004G202100 Sobic004G202100 Sobic010G253300--Sobic004G202100 Sobic010G253300--Sobic003G348800 Sobic002G395000 Sobic002G395000 Sobic010G253300--Sobic002G395000 Sobic001G409900 Sobic001G409900 Sobic010G253300--Sobic001G409900 Sobic004G262300 Sobic004G262300 Sobic010G253300--Sobic004G262300 Sobic001G217500 Sobic001G217500 Sobic010G253300--Sobic001G217500 Sobic004G257800 Sobic004G257800 Sobic006G156600--Sobic004G257800 Sobic007G009500 Sobic007G009500 Sobic006G156600--Sobic007G009500 Sobic006G156600--Sobic002G075500 Sobic004G007600 Sobic004G007600 Sobic006G156600--Sobic004G007600 Sobic001G108350 Sobic001G108350 Sobic006G156600--Sobic001G108350 Sobic001G132800 Sobic001G132800 Sobic006G156600--Sobic001G132800 Sobic009G125900 Sobic009G125900 Sobic006G156600--Sobic009G125900 Sobic003G254700 Sobic003G254700 Sobic006G156600--Sobic003G254700 Sobic007G054500 Sobic007G054500 Sobic006G156600--Sobic007G054500 Sobic004G159100 Sobic004G159100 Sobic008G043500--Sobic004G159100 Sobic002G271300 Sobic002G271300 Sobic008G043500--Sobic002G271300 Sobic001G313301 Sobic001G313301 Sobic008G043500--Sobic001G313301 Sobic001G133900 Sobic001G133900 Sobic008G043500--Sobic001G133900 Sobic002G252000 Sobic002G252000 Sobic008G043500--Sobic002G252000 Sobic003G444200 Sobic003G444200 Sobic008G043500--Sobic003G444200 Sobic001G008900 Sobic001G008900 Sobic008G043500--Sobic001G008900 Sobic003G161500 Sobic003G161500 Sobic008G043500--Sobic003G161500 Sobic008G043500--Sobic001G436100 Sobic004G337900 Sobic004G337900 Sobic003G353400--Sobic004G337900 Sobic001G099100 Sobic001G099100 Sobic003G353400--Sobic001G099100 Sobic007G225300 Sobic007G225300 Sobic003G353400--Sobic007G225300 Sobic006G242100 Sobic006G242100 Sobic003G353400--Sobic006G242100 Sobic009G030200 Sobic009G030200 Sobic003G353400--Sobic009G030200 Sobic007G178200 Sobic007G178200 Sobic003G353400--Sobic007G178200 Sobic003G319000 Sobic003G319000 Sobic003G353400--Sobic003G319000 Sobic010G050900 Sobic010G050900 Sobic003G353400--Sobic010G050900 Sobic003G312400 Sobic003G312400 Sobic003G353400--Sobic003G312400 Sobic002G183400 Sobic002G183400 Sobic005G142101--Sobic002G183400 Sobic002G342000 Sobic002G342000 Sobic005G142101--Sobic002G342000 Sobic002G136700 Sobic002G136700 Sobic005G142101--Sobic002G136700 Sobic005G168100 Sobic005G168100 Sobic005G142101--Sobic005G168100 Sobic003G357100 Sobic003G357100 Sobic005G142101--Sobic003G357100 Sobic004G318100 Sobic004G318100 Sobic005G142101--Sobic004G318100 Sobic010G089500 Sobic010G089500 Sobic005G142101--Sobic010G089500 Sobic004G278000 Sobic004G278000 Sobic005G142101--Sobic004G278000 Sobic005G142101--Sobic009G182200 Sobic009G182200--Sobic003G319000 Sobic009G171100 Sobic009G171100 Sobic009G182200--Sobic009G171100 Sobic003G217100 Sobic003G217100 Sobic009G182200--Sobic003G217100 Sobic003G348200 Sobic003G348200 Sobic009G182200--Sobic003G348200 Sobic010G201388 Sobic010G201388 Sobic009G182200--Sobic010G201388 Sobic001G441000 Sobic001G441000 Sobic009G182200--Sobic001G441000 Sobic004G123000 Sobic004G123000 Sobic009G182200--Sobic004G123000 Sobic003G224300 Sobic003G224300 Sobic009G182200--Sobic003G224300 Sobic006G013000 Sobic006G013000 Sobic009G182200--Sobic006G013000 Sobic004G331900 Sobic004G331900 Sobic010G248000--Sobic004G331900 Sobic002G428600 Sobic002G428600 Sobic010G248000--Sobic002G428600 Sobic008G058200 Sobic008G058200 Sobic010G248000--Sobic008G058200 Sobic010G248000--Sobic003G348200 Sobic003G122400 Sobic003G122400 Sobic010G248000--Sobic003G122400 Sobic009G187600 Sobic009G187600 Sobic010G248000--Sobic009G187600 Sobic003G327600 Sobic003G327600 Sobic010G248000--Sobic003G327600 Sobic010G178800 Sobic010G178800 Sobic010G248000--Sobic010G178800 Sobic001G451901 Sobic001G451901 Sobic010G248000--Sobic001G451901
Octagon: transcription factors


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