Gene annotation
Transcriptome id Sobic.003G278400.1
Synonym Sb03g033030
Functional annotation DUF581 domain containing protein, expressed
UniProt C5XIC2
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11460 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os01g52100.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a038980 , Zm00025a027752
Brachypodium -
Barley HORVU3Hr1G068120.8 , HORVU3Hr1G068120.9 , HORVU3Hr1G068120.4 , HORVU3Hr1G068120.5 , HORVU3Hr1G068120.6 , HORVU3Hr1G068120.7 , HORVU3Hr1G068120.1 , HORVU3Hr1G068120.2 , HORVU3Hr1G068120.3
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G316900 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
2 Sobic.001G374900 RALFL15 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
3 Sobic.006G157100 sphingolipid delta desaturase, putative, expressed K04712: sphingolipid 4-desaturase/C4-monooxygenase
4 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
5 Sobic.001G460100 heparanase-like protein precursor, putative, expressed K07964: heparanase
6 Sobic.002G225000 remorin C-terminal domain containing protein, putative, expressed -
7 Sobic.003G028000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
9 Sobic.006G034300 Transketolase(PubMedID : 26186930)@"Transketolase, putative (Os)"(PubMedID : 27208977)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
10 Sobic.008G166050 - -
11 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase
12 Sobic.009G026800 lectin protein kinase family protein, putative, expressed -
13 Sobic.009G251100 TTL1, putative, expressed K09527: DnaJ homolog subfamily C member 7
14 Sobic.010G096200 expressed protein -
15 Sobic.001G185600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
16 Sobic.009G222000 LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.003G102700 exostosin family protein, putative, expressed -
18 Sobic.006G183200 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
19 Sobic.003G011000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@AAA-type ATPase family protein, putative, expressed -
20 Sobic.003G243500 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic003G278400 Sobic003G278400 Sobic002G316900 Sobic002G316900 Sobic003G278400--Sobic002G316900 Sobic001G374900 Sobic001G374900 Sobic003G278400--Sobic001G374900 Sobic006G157100 Sobic006G157100 Sobic003G278400--Sobic006G157100 Sobic007G195300 Sobic007G195300 Sobic003G278400--Sobic007G195300 Sobic001G460100 Sobic001G460100 Sobic003G278400--Sobic001G460100 Sobic002G225000 Sobic002G225000 Sobic003G278400--Sobic002G225000 Sobic003G028000 Sobic003G028000 Sobic003G278400--Sobic003G028000 Sobic004G253500 Sobic004G253500 Sobic003G278400--Sobic004G253500 Sobic006G034300 Sobic006G034300 Sobic003G278400--Sobic006G034300 Sobic003G292400 Sobic003G292400 Sobic002G316900--Sobic003G292400 Sobic002G316900--Sobic003G278400 Sobic010G101300 Sobic010G101300 Sobic002G316900--Sobic010G101300 Sobic003G194400 Sobic003G194400 Sobic002G316900--Sobic003G194400 Sobic006G114700 Sobic006G114700 Sobic002G316900--Sobic006G114700 Sobic004G047900 Sobic004G047900 Sobic002G316900--Sobic004G047900 Sobic003G011000 Sobic003G011000 Sobic002G316900--Sobic003G011000 Sobic001G307000 Sobic001G307000 Sobic002G316900--Sobic001G307000 Sobic002G316900--Sobic006G034300 Sobic001G249500 Sobic001G249500 Sobic001G374900--Sobic001G249500 Sobic002G128600 Sobic002G128600 Sobic001G374900--Sobic002G128600 Sobic006G175700 Sobic006G175700 Sobic001G374900--Sobic006G175700 Sobic006G227000 Sobic006G227000 Sobic001G374900--Sobic006G227000 Sobic005G190800 Sobic005G190800 Sobic001G374900--Sobic005G190800 Sobic008G030700 Sobic008G030700 Sobic001G374900--Sobic008G030700 Sobic003G317800 Sobic003G317800 Sobic001G374900--Sobic003G317800 Sobic005G036500 Sobic005G036500 Sobic001G374900--Sobic005G036500 Sobic001G249600 Sobic001G249600 Sobic001G374900--Sobic001G249600 Sobic001G530100 Sobic001G530100 Sobic006G157100--Sobic001G530100 Sobic008G059900 Sobic008G059900 Sobic006G157100--Sobic008G059900 Sobic010G197200 Sobic010G197200 Sobic006G157100--Sobic010G197200 Sobic003G179000 Sobic003G179000 Sobic006G157100--Sobic003G179000 Sobic006G157100--Sobic004G253500 Sobic003G148400 Sobic003G148400 Sobic006G157100--Sobic003G148400 Sobic007G079600 Sobic007G079600 Sobic006G157100--Sobic007G079600 Sobic004G129100 Sobic004G129100 Sobic006G157100--Sobic004G129100 Sobic007G112100 Sobic007G112100 Sobic006G157100--Sobic007G112100 Sobic003G131800 Sobic003G131800 Sobic007G195300--Sobic003G131800 Sobic007G195300--Sobic008G030700 Sobic002G278700 Sobic002G278700 Sobic007G195300--Sobic002G278700 Sobic002G278800 Sobic002G278800 Sobic007G195300--Sobic002G278800 Sobic010G012400 Sobic010G012400 Sobic007G195300--Sobic010G012400 Sobic007G195300--Sobic001G249500 Sobic007G195300--Sobic006G175700 Sobic007G195300--Sobic005G190800 Sobic004G157550 Sobic004G157550 Sobic007G195300--Sobic004G157550 Sobic010G177100 Sobic010G177100 Sobic001G460100--Sobic010G177100 Sobic009G188900 Sobic009G188900 Sobic001G460100--Sobic009G188900 Sobic009G113900 Sobic009G113900 Sobic001G460100--Sobic009G113900 Sobic003G084200 Sobic003G084200 Sobic001G460100--Sobic003G084200 Sobic009G012600 Sobic009G012600 Sobic001G460100--Sobic009G012600 Sobic003G024000 Sobic003G024000 Sobic001G460100--Sobic003G024000 Sobic007G050800 Sobic007G050800 Sobic001G460100--Sobic007G050800 Sobic006G275500 Sobic006G275500 Sobic001G460100--Sobic006G275500 Sobic003G102700 Sobic003G102700 Sobic001G460100--Sobic003G102700 Sobic009G231100 Sobic009G231100 Sobic002G225000--Sobic009G231100 Sobic003G078300 Sobic003G078300 Sobic002G225000--Sobic003G078300 Sobic002G377300 Sobic002G377300 Sobic002G225000--Sobic002G377300 Sobic001G379100 Sobic001G379100 Sobic002G225000--Sobic001G379100 Sobic010G165100 Sobic010G165100 Sobic002G225000--Sobic010G165100 Sobic002G225000--Sobic003G148400 Sobic003G223000 Sobic003G223000 Sobic002G225000--Sobic003G223000 Sobic002G388600 Sobic002G388600 Sobic002G225000--Sobic002G388600 Sobic002G078000 Sobic002G078000 Sobic002G225000--Sobic002G078000 Sobic007G109800 Sobic007G109800 Sobic003G028000--Sobic007G109800 Sobic002G366500 Sobic002G366500 Sobic003G028000--Sobic002G366500 Sobic003G236551 Sobic003G236551 Sobic003G028000--Sobic003G236551 Sobic003G243500 Sobic003G243500 Sobic003G028000--Sobic003G243500 Sobic006G074300 Sobic006G074300 Sobic003G028000--Sobic006G074300 Sobic003G028000--Sobic003G278400 Sobic002G133700 Sobic002G133700 Sobic003G028000--Sobic002G133700 Sobic007G130800 Sobic007G130800 Sobic003G028000--Sobic007G130800 Sobic001G338000 Sobic001G338000 Sobic003G028000--Sobic001G338000 Sobic004G253500--Sobic003G078300 Sobic001G461800 Sobic001G461800 Sobic004G253500--Sobic001G461800 Sobic003G250000 Sobic003G250000 Sobic004G253500--Sobic003G250000 Sobic003G259500 Sobic003G259500 Sobic004G253500--Sobic003G259500 Sobic004G253500--Sobic008G059900 Sobic004G253500--Sobic003G024000 Sobic009G002900 Sobic009G002900 Sobic004G253500--Sobic009G002900 Sobic001G199500 Sobic001G199500 Sobic004G253500--Sobic001G199500 Sobic004G253500--Sobic003G102700 Sobic006G034300--Sobic003G011000 Sobic001G396900 Sobic001G396900 Sobic006G034300--Sobic001G396900 Sobic004G114600 Sobic004G114600 Sobic006G034300--Sobic004G114600 Sobic005G165800 Sobic005G165800 Sobic006G034300--Sobic005G165800 Sobic009G171400 Sobic009G171400 Sobic006G034300--Sobic009G171400 Sobic005G138500 Sobic005G138500 Sobic006G034300--Sobic005G138500 Sobic002G413200 Sobic002G413200 Sobic006G034300--Sobic002G413200 Sobic006G050600 Sobic006G050600 Sobic006G034300--Sobic006G050600 Sobic006G208000 Sobic006G208000 Sobic006G034300--Sobic006G208000
Octagon: transcription factors


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