Gene annotation
Transcriptome id Sobic.003G243500.1
Synonym TMO3, CRF2, Sb03g029990
Functional annotation AP2 domain containing protein, expressed
UniProt C5XFB4
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G27950 : cytokinin response factor 4
RAP-DB (Rice) LOC_Os01g46870.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032190 , Zm00025a028188 , Zm00025a009134 , Zm00025a057002 , Zm00025a020895 , Zm00025a038708 , Zm00025a009843
Brachypodium KQK09018 , KQJ83906 , KQJ83907 , PNT61818 , KQJ91651 , PNT62439 , KQK03360 , KQK23628 , KQJ86112 , KQK00588 , KQK00586 , KQK10781
Barley HORVU5Hr1G018720.1 , HORVU6Hr1G062430.1 , HORVU6Hr1G062380.3 , HORVU6Hr1G062380.2 , HORVU6Hr1G062380.1 , HORVU6Hr1G062380.5 , HORVU6Hr1G062380.4 , HORVU1Hr1G055710.1 , HORVU1Hr1G055710.3 , HORVU4Hr1G080300.1 , HORVU3Hr1G059250.2 , HORVU3Hr1G059250.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G296300 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
2 Sobic.009G251100 TTL1, putative, expressed K09527: DnaJ homolog subfamily C member 7
3 Sobic.003G028000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
4 Sobic.010G114000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
5 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
6 Sobic.001G304800 expressed protein -
7 Sobic.010G134900 DNA binding protein, putative, expressed -
8 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
9 Sobic.009G125300 phospholipase, putative, expressed -
10 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
11 Sobic.003G134900 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.008G091557 - -
14 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1
15 Sobic.006G157100 sphingolipid delta desaturase, putative, expressed K04712: sphingolipid 4-desaturase/C4-monooxygenase
16 Sobic.009G026800 lectin protein kinase family protein, putative, expressed -
17 Sobic.003G395200 AML1, putative, expressed -
18 Sobic.002G268100 - K16911: ATP-dependent RNA helicase DDX21
19 Sobic.003G419600 disease resistance protein RGA2, putative, expressed -
20 Sobic.001G263900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase


Gene co-expression network
sample Sobic003G243500 Sobic003G243500 Sobic004G296300 Sobic004G296300 Sobic003G243500--Sobic004G296300 Sobic009G251100 Sobic009G251100 Sobic003G243500--Sobic009G251100 Sobic003G028000 Sobic003G028000 Sobic003G243500--Sobic003G028000 Sobic010G114000 Sobic010G114000 Sobic003G243500--Sobic010G114000 Sobic001G196000 Sobic001G196000 Sobic003G243500--Sobic001G196000 Sobic001G304800 Sobic001G304800 Sobic003G243500--Sobic001G304800 Sobic010G134900 Sobic010G134900 Sobic003G243500--Sobic010G134900 Sobic007G139500 Sobic007G139500 Sobic003G243500--Sobic007G139500 Sobic009G125300 Sobic009G125300 Sobic003G243500--Sobic009G125300 Sobic004G296300--Sobic009G251100 Sobic007G130900 Sobic007G130900 Sobic004G296300--Sobic007G130900 Sobic004G296300--Sobic001G196000 Sobic004G296300--Sobic007G139500 Sobic010G096100 Sobic010G096100 Sobic004G296300--Sobic010G096100 Sobic003G017500 Sobic003G017500 Sobic004G296300--Sobic003G017500 Sobic008G174900 Sobic008G174900 Sobic004G296300--Sobic008G174900 Sobic010G120300 Sobic010G120300 Sobic004G296300--Sobic010G120300 Sobic007G079600 Sobic007G079600 Sobic004G296300--Sobic007G079600 Sobic009G251100--Sobic004G296300 Sobic009G251100--Sobic010G120300 Sobic009G251100--Sobic010G096100 Sobic003G419600 Sobic003G419600 Sobic009G251100--Sobic003G419600 Sobic009G251100--Sobic001G196000 Sobic001G073150 Sobic001G073150 Sobic009G251100--Sobic001G073150 Sobic004G243800 Sobic004G243800 Sobic009G251100--Sobic004G243800 Sobic001G437500 Sobic001G437500 Sobic009G251100--Sobic001G437500 Sobic009G063400 Sobic009G063400 Sobic009G251100--Sobic009G063400 Sobic007G109800 Sobic007G109800 Sobic003G028000--Sobic007G109800 Sobic002G366500 Sobic002G366500 Sobic003G028000--Sobic002G366500 Sobic003G236551 Sobic003G236551 Sobic003G028000--Sobic003G236551 Sobic003G028000--Sobic003G243500 Sobic006G074300 Sobic006G074300 Sobic003G028000--Sobic006G074300 Sobic003G278400 Sobic003G278400 Sobic003G028000--Sobic003G278400 Sobic002G133700 Sobic002G133700 Sobic003G028000--Sobic002G133700 Sobic007G130800 Sobic007G130800 Sobic003G028000--Sobic007G130800 Sobic001G338000 Sobic001G338000 Sobic003G028000--Sobic001G338000 Sobic010G114000--Sobic010G096100 Sobic006G075000 Sobic006G075000 Sobic010G114000--Sobic006G075000 Sobic002G271300 Sobic002G271300 Sobic010G114000--Sobic002G271300 Sobic010G131400 Sobic010G131400 Sobic010G114000--Sobic010G131400 Sobic002G254900 Sobic002G254900 Sobic010G114000--Sobic002G254900 Sobic002G111500 Sobic002G111500 Sobic010G114000--Sobic002G111500 Sobic010G180100 Sobic010G180100 Sobic010G114000--Sobic010G180100 Sobic010G042600 Sobic010G042600 Sobic010G114000--Sobic010G042600 Sobic004G165300 Sobic004G165300 Sobic010G114000--Sobic004G165300 Sobic001G196000--Sobic001G437500 Sobic001G196000--Sobic007G139500 Sobic001G196000--Sobic004G243800 Sobic009G206500 Sobic009G206500 Sobic001G196000--Sobic009G206500 Sobic004G274800 Sobic004G274800 Sobic001G196000--Sobic004G274800 Sobic006G081000 Sobic006G081000 Sobic001G196000--Sobic006G081000 Sobic007G173000 Sobic007G173000 Sobic001G196000--Sobic007G173000 Sobic008G174966 Sobic008G174966 Sobic001G196000--Sobic008G174966 Sobic001G159800 Sobic001G159800 Sobic001G196000--Sobic001G159800 Sobic002G296000 Sobic002G296000 Sobic001G304800--Sobic002G296000 Sobic002G286700 Sobic002G286700 Sobic001G304800--Sobic002G286700 Sobic008G083500 Sobic008G083500 Sobic001G304800--Sobic008G083500 Sobic009G101100 Sobic009G101100 Sobic001G304800--Sobic009G101100 Sobic006G105600 Sobic006G105600 Sobic001G304800--Sobic006G105600 Sobic007G218100 Sobic007G218100 Sobic001G304800--Sobic007G218100 Sobic003G246800 Sobic003G246800 Sobic001G304800--Sobic003G246800 Sobic009G146250 Sobic009G146250 Sobic001G304800--Sobic009G146250 Sobic006G124400 Sobic006G124400 Sobic001G304800--Sobic006G124400 Sobic001G261400 Sobic001G261400 Sobic010G134900--Sobic001G261400 Sobic004G214300 Sobic004G214300 Sobic010G134900--Sobic004G214300 Sobic009G102400 Sobic009G102400 Sobic010G134900--Sobic009G102400 Sobic006G124200 Sobic006G124200 Sobic010G134900--Sobic006G124200 Sobic003G419300 Sobic003G419300 Sobic010G134900--Sobic003G419300 Sobic010G155100 Sobic010G155100 Sobic010G134900--Sobic010G155100 Sobic002G239700 Sobic002G239700 Sobic010G134900--Sobic002G239700 Sobic004G112200 Sobic004G112200 Sobic010G134900--Sobic004G112200 Sobic003G419400 Sobic003G419400 Sobic010G134900--Sobic003G419400 Sobic007G139500--Sobic001G196000 Sobic001G051300 Sobic001G051300 Sobic007G139500--Sobic001G051300 Sobic007G139500--Sobic009G206500 Sobic007G139500--Sobic001G437500 Sobic003G179500 Sobic003G179500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic007G139500--Sobic003G017500 Sobic002G191000 Sobic002G191000 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100 Sobic002G216000 Sobic002G216000 Sobic009G125300--Sobic002G216000 Sobic008G091557 Sobic008G091557 Sobic009G125300--Sobic008G091557 Sobic001G131001 Sobic001G131001 Sobic009G125300--Sobic001G131001 Sobic008G072600 Sobic008G072600 Sobic009G125300--Sobic008G072600 Sobic005G107500 Sobic005G107500 Sobic009G125300--Sobic005G107500 Sobic009G221900 Sobic009G221900 Sobic009G125300--Sobic009G221900 Sobic004G034200 Sobic004G034200 Sobic009G125300--Sobic004G034200 Sobic007G038600 Sobic007G038600 Sobic009G125300--Sobic007G038600 Sobic008G133000 Sobic008G133000 Sobic009G125300--Sobic008G133000
Octagon: transcription factors


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