Gene annotation
| Transcriptome id | Sobic.004G283550.1 |
|---|---|
| Synonym | - |
| Functional annotation | - |
| UniProt | A0A1Z5RPF9 |
| Pfam | - |
| Panther DB | - |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | - |
|---|---|
| RAP-DB (Rice) | LOC_Os06g22260.1 : conserved hypothetical protein |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G463450 | - | - |
| 2 | Sobic.001G463450 | - | - |
| 3 | Sobic.001G463450 | - | - |
| 4 | Sobic.001G463450 | - | - |
| 5 | Sobic.001G463450 | - | - |
| 6 | Sobic.001G463450 | - | - |
| 7 | Sobic.008G114800 | - | - |
| 8 | Sobic.009G182400 | circadian clock coupling factor ZGT, putative, expressed | - |
| 9 | Sobic.005G095640 | - | - |
| 10 | Sobic.003G402550 | - | - |
| 11 | Sobic.005G062500 | - | - |
| 12 | Sobic.010G092900 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsFtsH6 FtsH protease, homologue of AtFtsH6, expressed | K03798: ftsH, cell division protease FtsH |
| 13 | Sobic.002G102700 | cytochrome P450, putative, expressed | - |
| 14 | Sobic.009G076550 | - | - |
| 15 | Sobic.003G356000 | "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@Up-reguralion under drought(PubMedID : 24916767)@"an enzyme responsible for the ratelimiting step in proline biosynthesis, expressed at higher levels in the stay-green line, B35"(PubMedID : 26320239)@Delta 1-pyrroline-5-carboxylate synthase 2(PubMedID : 26320239)@Up-reguralion under drought(PubMedID : 24916767)@"an enzyme responsible for the ratelimiting step in proline biosynthesis, expressed at higher levels in the stay-green line, B35"(PubMedID : 26320239)@Delta 1-pyrroline-5-carboxylate synthase 2(PubMedID : 26320239)@The γ- glutamyl kinase activity of P5CS represents the rate-limiting step in this pathway and also features feedback inhibition by proline(PubMedID : 21958707)@amino acid kinase, putative, expressed | K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase |
| 16 | Sobic.001G155300 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed | K09840: 9-cis-epoxycarotenoid dioxygenase |
| 17 | Sobic.001G175900 | cytochrome P450, putative, expressed | - |
| 18 | Sobic.002G148700 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heavy metal transport/detoxification protein, putative, expressed | - |
| 19 | Sobic.003G422200 | recA protein, expressed | - |
| 20 | Sobic.002G036600 | ZOS3-19 - C2H2 zinc finger protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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