Gene annotation
Transcriptome id Sobic.003G422200.1,Sobic.003G422200.2
Synonym BGL2, PR2, BG2, PR-2
Functional annotation recA protein, expressed
UniProt Q93WT3 , A0A1B6Q838
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF86
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G57260 : beta-1,3-glucanase 2
RAP-DB (Rice) LOC_Os01g71690.3 : recA protein, expressed
MaizeGDB (Corn) Zm00025a039154 , Zm00025a043501 , Zm00025a026061
Brachypodium PNT73588 , KQK11472 , KQK11473 , KQK11471 , KQK11483
Barley HORVU3Hr1G105820.2 , HORVU3Hr1G105820.1
Wheat TraesCS3B02G525000 , TraesCS3A02G483000 , TraesCS3B02G528500 , TraesCS3D02G477300 , TraesCS3B02G526000 , TraesCS3D02G478300 , TraesCS3A02G482200 , TraesCS3A02G483800 , TraesCS3D02G478900 , TraesCS3A02G483700 , TraesCS3B02G530500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
2 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.009G030600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@TKL_IRAK_DUF26-lf.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.004G309600 ABA signaling component(PubMedID : 24151305)@"Central regulator in ABA signaling, biosynthesis, and drought resistance in rice"(PubMedID : 30367619)@bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
5 Sobic.004G300300 Up-reguralion under drought(PubMedID : 24916767)@homeobox associated leucine zipper, putative, expressed -
6 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
8 Sobic.009G076500 expressed protein -
9 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
10 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
11 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
12 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
13 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -
14 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
15 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
16 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.006G026400 - -
18 Sobic.003G146000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
19 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
20 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic003G422200 Sobic003G422200 Sobic003G424500 Sobic003G424500 Sobic003G422200--Sobic003G424500 Sobic003G087100 Sobic003G087100 Sobic003G422200--Sobic003G087100 Sobic009G030600 Sobic009G030600 Sobic003G422200--Sobic009G030600 Sobic004G309600 Sobic004G309600 Sobic003G422200--Sobic004G309600 Sobic004G300300 Sobic004G300300 Sobic003G422200--Sobic004G300300 Sobic004G176900 Sobic004G176900 Sobic003G422200--Sobic004G176900 Sobic006G203000 Sobic006G203000 Sobic003G422200--Sobic006G203000 Sobic009G076500 Sobic009G076500 Sobic003G422200--Sobic009G076500 Sobic008G059000 Sobic008G059000 Sobic003G422200--Sobic008G059000 Sobic003G146000 Sobic003G146000 Sobic003G424500--Sobic003G146000 Sobic003G424500--Sobic004G300300 Sobic010G247500 Sobic010G247500 Sobic003G424500--Sobic010G247500 Sobic010G105500 Sobic010G105500 Sobic003G424500--Sobic010G105500 Sobic009G167000 Sobic009G167000 Sobic003G424500--Sobic009G167000 Sobic003G424500--Sobic009G030600 Sobic003G424500--Sobic003G087100 Sobic003G424500--Sobic008G059000 Sobic003G424500--Sobic009G076500 Sobic004G281200 Sobic004G281200 Sobic003G087100--Sobic004G281200 Sobic002G037400 Sobic002G037400 Sobic003G087100--Sobic002G037400 Sobic003G087100--Sobic006G203000 Sobic003G087100--Sobic008G059000 Sobic002G110200 Sobic002G110200 Sobic003G087100--Sobic002G110200 Sobic003G087100--Sobic004G309600 Sobic003G087100--Sobic003G424500 Sobic001G081600 Sobic001G081600 Sobic003G087100--Sobic001G081600 Sobic001G075101 Sobic001G075101 Sobic003G087100--Sobic001G075101 Sobic009G030600--Sobic003G424500 Sobic009G030600--Sobic008G059000 Sobic009G030600--Sobic009G167000 Sobic009G030600--Sobic004G281200 Sobic002G217100 Sobic002G217100 Sobic009G030600--Sobic002G217100 Sobic001G050800 Sobic001G050800 Sobic009G030600--Sobic001G050800 Sobic004G053200 Sobic004G053200 Sobic009G030600--Sobic004G053200 Sobic001G051800 Sobic001G051800 Sobic009G030600--Sobic001G051800 Sobic006G194600 Sobic006G194600 Sobic009G030600--Sobic006G194600 Sobic004G309600--Sobic003G087100 Sobic004G309600--Sobic002G110200 Sobic003G272400 Sobic003G272400 Sobic004G309600--Sobic003G272400 Sobic004G309600--Sobic004G300300 Sobic004G309600--Sobic008G059000 Sobic004G309600--Sobic006G203000 Sobic006G163900 Sobic006G163900 Sobic004G309600--Sobic006G163900 Sobic004G309600--Sobic003G422200 Sobic004G309600--Sobic002G037400 Sobic002G021300 Sobic002G021300 Sobic004G300300--Sobic002G021300 Sobic004G300300--Sobic003G424500 Sobic004G300300--Sobic009G167000 Sobic002G135800 Sobic002G135800 Sobic004G300300--Sobic002G135800 Sobic002G188700 Sobic002G188700 Sobic004G300300--Sobic002G188700 Sobic007G101800 Sobic007G101800 Sobic004G300300--Sobic007G101800 Sobic004G300300--Sobic003G087100 Sobic004G300300--Sobic008G059000 Sobic004G300300--Sobic009G076500 Sobic009G068900 Sobic009G068900 Sobic004G176900--Sobic009G068900 Sobic004G244100 Sobic004G244100 Sobic004G176900--Sobic004G244100 Sobic002G197600 Sobic002G197600 Sobic004G176900--Sobic002G197600 Sobic004G176900--Sobic009G167000 Sobic009G212800 Sobic009G212800 Sobic004G176900--Sobic009G212800 Sobic004G176900--Sobic006G203000 Sobic004G176900--Sobic002G037400 Sobic008G058900 Sobic008G058900 Sobic004G176900--Sobic008G058900 Sobic002G367900 Sobic002G367900 Sobic004G176900--Sobic002G367900 Sobic006G203000--Sobic002G037400 Sobic006G203000--Sobic001G075101 Sobic007G169600 Sobic007G169600 Sobic006G203000--Sobic007G169600 Sobic002G331450 Sobic002G331450 Sobic006G203000--Sobic002G331450 Sobic003G083000 Sobic003G083000 Sobic006G203000--Sobic003G083000 Sobic002G325600 Sobic002G325600 Sobic006G203000--Sobic002G325600 Sobic006G026400 Sobic006G026400 Sobic006G203000--Sobic006G026400 Sobic002G023900 Sobic002G023900 Sobic006G203000--Sobic002G023900 Sobic006G203000--Sobic002G110200 Sobic009G076500--Sobic002G021300 Sobic009G076700 Sobic009G076700 Sobic009G076500--Sobic009G076700 Sobic009G076500--Sobic002G037400 Sobic009G076500--Sobic006G026400 Sobic009G076500--Sobic006G203000 Sobic009G076500--Sobic009G167000 Sobic009G076500--Sobic004G244100 Sobic009G076500--Sobic008G059000 Sobic009G076500--Sobic006G194600 Sobic008G059000--Sobic004G281200 Sobic008G059000--Sobic008G058900 Sobic008G059000--Sobic002G021300 Sobic008G059000--Sobic003G087100 Sobic008G059000--Sobic006G194600 Sobic008G059000--Sobic009G167000 Sobic008G059000--Sobic004G244100 Sobic008G059000--Sobic009G076500 Sobic010G016500 Sobic010G016500 Sobic008G059000--Sobic010G016500
Octagon: transcription factors


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