Gene annotation
Transcriptome id Sobic.001G157900.1
Synonym PLAIIIA, PLP7, Sb01g013760
Functional annotation PLA IIIA/PLP7, putative, expressed
UniProt C5WR91
Pfam PF01734
Panther DB PTHR32241 PTHR32241:SF4
NCBI CDD KOG0513; Ca2+-independent phospholipase A2
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G54950 : patatin-like protein 6
RAP-DB (Rice) LOC_Os03g43880.1 : PLA IIIA/PLP7, putative, expressed
MaizeGDB (Corn) Zm00025a008446 , Zm00025a025353 , Zm00025a007305 , Zm00025a007304 , Zm00025a004671 , Zm00025a017276 , Zm00025a001621
Brachypodium KQK14014
Barley HORVU5Hr1G011400.10 , HORVU5Hr1G093250.4 , HORVU5Hr1G011400.1 , HORVU5Hr1G011400.3 , HORVU5Hr1G011400.5 , HORVU5Hr1G011400.4 , HORVU5Hr1G011400.7 , HORVU5Hr1G011400.6 , HORVU5Hr1G011400.9 , HORVU5Hr1G011400.8 , HORVU5Hr1G093250.5 , HORVU6Hr1G088700.1
Wheat TraesCS5D02G057600 , TraesCS5D02G430400 , TraesCS5A02G047000 , TraesCS5B02G424100 , TraesCS5B02G052000 , TraesCS5B02G423900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G031500 expressed protein -
2 Sobic.006G120000 BTBN11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
3 Sobic.005G038000 expressed protein -
4 Sobic.005G070800 - -
5 Sobic.001G009100 expressed protein -
6 Sobic.001G515800 no apical meristem protein, putative, expressed -
7 Sobic.006G163200 COBRA, putative, expressed -
8 Sobic.010G246400 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
9 Sobic.003G015950 - -
10 Sobic.005G190300 - -
11 Sobic.001G158200 PLA IIIA/PLP7, putative, expressed -
12 Sobic.008G123350 - -
13 Sobic.001G061900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
14 Sobic.009G179000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
15 Sobic.002G076600 rc - bHLH transcription factor regulating proanthocyanidin production in seeds, expressed -
16 Sobic.008G143300 - -
17 Sobic.003G153200 polygalacturonase, putative, expressed -
18 Sobic.002G271000 BAP2, putative, expressed -
19 Sobic.004G014700 THION20 - Plant thionin family protein precursor, putative, expressed -
20 Sobic.010G121800 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic001G157900 Sobic001G157900 Sobic003G031500 Sobic003G031500 Sobic001G157900--Sobic003G031500 Sobic006G120000 Sobic006G120000 Sobic001G157900--Sobic006G120000 Sobic005G038000 Sobic005G038000 Sobic001G157900--Sobic005G038000 Sobic005G070800 Sobic005G070800 Sobic001G157900--Sobic005G070800 Sobic001G009100 Sobic001G009100 Sobic001G157900--Sobic001G009100 Sobic001G515800 Sobic001G515800 Sobic001G157900--Sobic001G515800 Sobic006G163200 Sobic006G163200 Sobic001G157900--Sobic006G163200 Sobic010G246400 Sobic010G246400 Sobic001G157900--Sobic010G246400 Sobic003G015950 Sobic003G015950 Sobic001G157900--Sobic003G015950 Sobic001G209600 Sobic001G209600 Sobic003G031500--Sobic001G209600 Sobic001G217300 Sobic001G217300 Sobic003G031500--Sobic001G217300 Sobic003G153200 Sobic003G153200 Sobic003G031500--Sobic003G153200 Sobic001G152600 Sobic001G152600 Sobic003G031500--Sobic001G152600 Sobic003G031500--Sobic001G157900 Sobic003G031500--Sobic005G038000 Sobic004G262600 Sobic004G262600 Sobic003G031500--Sobic004G262600 Sobic001G086400 Sobic001G086400 Sobic003G031500--Sobic001G086400 Sobic001G061900 Sobic001G061900 Sobic003G031500--Sobic001G061900 Sobic003G040100 Sobic003G040100 Sobic006G120000--Sobic003G040100 Sobic007G121000 Sobic007G121000 Sobic006G120000--Sobic007G121000 Sobic009G190400 Sobic009G190400 Sobic006G120000--Sobic009G190400 Sobic010G023500 Sobic010G023500 Sobic006G120000--Sobic010G023500 Sobic006G155200 Sobic006G155200 Sobic006G120000--Sobic006G155200 Sobic004G156600 Sobic004G156600 Sobic006G120000--Sobic004G156600 Sobic008G020500 Sobic008G020500 Sobic006G120000--Sobic008G020500 Sobic006G120000--Sobic001G157900 Sobic002G282100 Sobic002G282100 Sobic006G120000--Sobic002G282100 Sobic008G122300 Sobic008G122300 Sobic005G038000--Sobic008G122300 Sobic001G341200 Sobic001G341200 Sobic005G038000--Sobic001G341200 Sobic001G209701 Sobic001G209701 Sobic005G038000--Sobic001G209701 Sobic005G070800--Sobic006G163200 Sobic002G076600 Sobic002G076600 Sobic005G070800--Sobic002G076600 Sobic008G123350 Sobic008G123350 Sobic005G070800--Sobic008G123350 Sobic005G190300 Sobic005G190300 Sobic005G070800--Sobic005G190300 Sobic008G143300 Sobic008G143300 Sobic005G070800--Sobic008G143300 Sobic006G189500 Sobic006G189500 Sobic005G070800--Sobic006G189500 Sobic004G014700 Sobic004G014700 Sobic005G070800--Sobic004G014700 Sobic004G195400 Sobic004G195400 Sobic005G070800--Sobic004G195400 Sobic010G121800 Sobic010G121800 Sobic005G070800--Sobic010G121800 Sobic001G009100--Sobic004G195400 Sobic001G009100--Sobic004G014700 Sobic008G048600 Sobic008G048600 Sobic001G009100--Sobic008G048600 Sobic001G009100--Sobic006G189500 Sobic003G411100 Sobic003G411100 Sobic001G009100--Sobic003G411100 Sobic006G131100 Sobic006G131100 Sobic001G009100--Sobic006G131100 Sobic001G009100--Sobic002G076600 Sobic001G324600 Sobic001G324600 Sobic001G009100--Sobic001G324600 Sobic001G009100--Sobic008G123350 Sobic001G158200 Sobic001G158200 Sobic001G515800--Sobic001G158200 Sobic005G070101 Sobic005G070101 Sobic001G515800--Sobic005G070101 Sobic004G168000 Sobic004G168000 Sobic001G515800--Sobic004G168000 Sobic002G159000 Sobic002G159000 Sobic001G515800--Sobic002G159000 Sobic002G271000 Sobic002G271000 Sobic001G515800--Sobic002G271000 Sobic002G239101 Sobic002G239101 Sobic001G515800--Sobic002G239101 Sobic006G134700 Sobic006G134700 Sobic001G515800--Sobic006G134700 Sobic009G179000 Sobic009G179000 Sobic001G515800--Sobic009G179000 Sobic006G031900 Sobic006G031900 Sobic001G515800--Sobic006G031900 Sobic006G163200--Sobic005G070800 Sobic006G163200--Sobic002G076600 Sobic001G235200 Sobic001G235200 Sobic006G163200--Sobic001G235200 Sobic006G163200--Sobic004G195400 Sobic006G163200--Sobic008G143300 Sobic006G163200--Sobic006G189500 Sobic006G213900 Sobic006G213900 Sobic006G163200--Sobic006G213900 Sobic006G163200--Sobic004G014700 Sobic001G152901 Sobic001G152901 Sobic006G163200--Sobic001G152901 Sobic004G229200 Sobic004G229200 Sobic010G246400--Sobic004G229200 Sobic010G230000 Sobic010G230000 Sobic010G246400--Sobic010G230000 Sobic010G246400--Sobic002G271000 Sobic007G196800 Sobic007G196800 Sobic010G246400--Sobic007G196800 Sobic002G151400 Sobic002G151400 Sobic010G246400--Sobic002G151400 Sobic002G128000 Sobic002G128000 Sobic010G246400--Sobic002G128000 Sobic009G194200 Sobic009G194200 Sobic010G246400--Sobic009G194200 Sobic001G321800 Sobic001G321800 Sobic010G246400--Sobic001G321800 Sobic004G075900 Sobic004G075900 Sobic010G246400--Sobic004G075900 Sobic003G015950--Sobic005G190300 Sobic001G396600 Sobic001G396600 Sobic003G015950--Sobic001G396600 Sobic003G015950--Sobic010G121800 Sobic008G143200 Sobic008G143200 Sobic003G015950--Sobic008G143200 Sobic002G332000 Sobic002G332000 Sobic003G015950--Sobic002G332000 Sobic001G200800 Sobic001G200800 Sobic003G015950--Sobic001G200800 Sobic003G015950--Sobic008G123350 Sobic002G103000 Sobic002G103000 Sobic003G015950--Sobic002G103000 Sobic010G029450 Sobic010G029450 Sobic003G015950--Sobic010G029450
Octagon: transcription factors


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