Gene annotation
Transcriptome id Sobic.010G246400.1
Synonym XTH22, Sb10g028550, TCH4
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt C5Z8T2
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF42
NCBI CDD -
KEGG Orthology K08235; xyloglucan:xyloglucosyl transferase
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G57560 : Xyloglucan endotransglucosylase/hydrolase family protein
RAP-DB (Rice) LOC_Os06g48160.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a018308 , Zm00025a019784 , Zm00025a034364 , Zm00025a018310 , Zm00025a050765 , Zm00025a054957 , Zm00025a056955 , Zm00025a036323
Brachypodium KQK17338 , KQJ94399 , KQJ84413 , KQJ84415 , KQJ84414 , KQK17341 , KQJ95699
Barley HORVU0Hr1G022110.1 , HORVU2Hr1G014530.1 , HORVU2Hr1G111060.2 , HORVU2Hr1G014530.3 , HORVU2Hr1G014530.2 , HORVU6Hr1G081590.1 , HORVU6Hr1G081590.3 , HORVU6Hr1G081590.2 , HORVU6Hr1G081590.5 , HORVU6Hr1G081590.4 , HORVU7Hr1G081740.1 , HORVU7Hr1G098330.6 , HORVU7Hr1G098330.4 , HORVU7Hr1G098330.5 , HORVU7Hr1G098330.2 , HORVU7Hr1G098330.1 , HORVU7Hr1G098280.2 , HORVU7Hr1G098280.3 , HORVU7Hr1G098280.1 , HORVU7Hr1G098440.1 , HORVU7Hr1G098440.2 , HORVU7Hr1G098440.3 , HORVU7Hr1G098440.4 , HORVU7Hr1G098440.5 , HORVU7Hr1G098440.6 , HORVU2Hr1G111060.1 , HORVU7Hr1G098320.2 , HORVU7Hr1G098320.3 , HORVU7Hr1G098260.1 , HORVU7Hr1G098260.2 , HORVU7Hr1G098260.3 , HORVU4Hr1G085940.5 , HORVU4Hr1G085940.1 , HORVU4Hr1G085940.2
Wheat TraesCS2A02G498200 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS2A02G498400 , TraesCS7B02G326900 , TraesCS7B02G327200 , TraesCS7D02G419300 , TraesCS2D02G498400 , TraesCS2B02G526600 , TraesCS2B02G526500 , TraesCS7B02G327700 , TraesCS7D02G339400 , TraesCS2B02G454800 , TraesCS7B02G327000 , TraesCS6B02G368300 , TraesCS7A02G426900 , TraesCS2D02G498500 , TraesCS2D02G498600 , TraesCS7B02G242900 , TraesCS7A02G427600 , TraesCS7A02G426100 , TraesCS7D02G418700 , TraesCS7D02G419100 , TraesCS7A02G427000 , TraesCS2B02G104700 , TraesCS7D02G419200 , TraesCS7A02G426600 , TraesCS7A02G426700 , TraesCS2A02G498500 , TraesCS2D02G498700 , TraesCS7D02G419900 , TraesCS2A02G498300 , TraesCS2D02G431800 , TraesCS2D02G498800 , TraesCS2A02G434300 , TraesCS7A02G331200
Populus -


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cDNA sequences
Sobic.010G246400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G229200 phosphate-induced protein 1 conserved region domain containing protein, expressed -
2 Sobic.010G230000 monocopper oxidase, putative, expressed -
3 Sobic.002G271000 BAP2, putative, expressed -
4 Sobic.007G196800 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
5 Sobic.002G151400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
6 Sobic.002G128000 receptor protein kinase, putative, expressed -
7 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
8 Sobic.001G321800 OsRhmbd7 - Putative Rhomboid homologue, expressed -
9 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
10 Sobic.009G242700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsCML14 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
11 Sobic.003G094600 glycosyltransferase protein, putative, expressed -
12 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.006G134900 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
14 Sobic.001G515800 no apical meristem protein, putative, expressed -
15 Sobic.003G365800 expressed protein -
16 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3
17 Sobic.001G061900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.001G116600 inactive receptor kinase At2g26730 precursor, putative, expressed -
19 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
20 Sobic.001G157700 PLA IIIA/PLP7, putative, expressed -


Gene co-expression network
sample Sobic010G246400 Sobic010G246400 Sobic004G229200 Sobic004G229200 Sobic010G246400--Sobic004G229200 Sobic010G230000 Sobic010G230000 Sobic010G246400--Sobic010G230000 Sobic002G271000 Sobic002G271000 Sobic010G246400--Sobic002G271000 Sobic007G196800 Sobic007G196800 Sobic010G246400--Sobic007G196800 Sobic002G151400 Sobic002G151400 Sobic010G246400--Sobic002G151400 Sobic002G128000 Sobic002G128000 Sobic010G246400--Sobic002G128000 Sobic009G194200 Sobic009G194200 Sobic010G246400--Sobic009G194200 Sobic001G321800 Sobic001G321800 Sobic010G246400--Sobic001G321800 Sobic004G075900 Sobic004G075900 Sobic010G246400--Sobic004G075900 Sobic006G081800 Sobic006G081800 Sobic004G229200--Sobic006G081800 Sobic004G229200--Sobic010G246400 Sobic010G269700 Sobic010G269700 Sobic004G229200--Sobic010G269700 Sobic002G289800 Sobic002G289800 Sobic004G229200--Sobic002G289800 Sobic003G316601 Sobic003G316601 Sobic004G229200--Sobic003G316601 Sobic001G116600 Sobic001G116600 Sobic004G229200--Sobic001G116600 Sobic004G229200--Sobic010G230000 Sobic004G229200--Sobic002G128000 Sobic004G229200--Sobic004G075900 Sobic010G204700 Sobic010G204700 Sobic010G230000--Sobic010G204700 Sobic001G456500 Sobic001G456500 Sobic010G230000--Sobic001G456500 Sobic004G238700 Sobic004G238700 Sobic010G230000--Sobic004G238700 Sobic010G230000--Sobic004G229200 Sobic001G142000 Sobic001G142000 Sobic010G230000--Sobic001G142000 Sobic010G230000--Sobic006G081800 Sobic010G230000--Sobic004G075900 Sobic007G176800 Sobic007G176800 Sobic010G230000--Sobic007G176800 Sobic010G230000--Sobic002G128000 Sobic002G159000 Sobic002G159000 Sobic002G271000--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic002G271000--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic002G271000--Sobic005G070101 Sobic006G163200 Sobic006G163200 Sobic002G271000--Sobic006G163200 Sobic006G213900 Sobic006G213900 Sobic002G271000--Sobic006G213900 Sobic002G239101 Sobic002G239101 Sobic002G271000--Sobic002G239101 Sobic001G235200 Sobic001G235200 Sobic002G271000--Sobic001G235200 Sobic006G134700 Sobic006G134700 Sobic002G271000--Sobic006G134700 Sobic009G179000 Sobic009G179000 Sobic002G271000--Sobic009G179000 Sobic003G134500 Sobic003G134500 Sobic007G196800--Sobic003G134500 Sobic007G196800--Sobic004G229200 Sobic001G091500 Sobic001G091500 Sobic007G196800--Sobic001G091500 Sobic001G069700 Sobic001G069700 Sobic007G196800--Sobic001G069700 Sobic003G084100 Sobic003G084100 Sobic007G196800--Sobic003G084100 Sobic003G442300 Sobic003G442300 Sobic007G196800--Sobic003G442300 Sobic010G092400 Sobic010G092400 Sobic007G196800--Sobic010G092400 Sobic007G196800--Sobic002G151400 Sobic001G401600 Sobic001G401600 Sobic007G196800--Sobic001G401600 Sobic002G151400--Sobic004G229200 Sobic002G151400--Sobic007G196800 Sobic002G151400--Sobic001G116600 Sobic006G189200 Sobic006G189200 Sobic002G151400--Sobic006G189200 Sobic001G404700 Sobic001G404700 Sobic002G151400--Sobic001G404700 Sobic001G108400 Sobic001G108400 Sobic002G151400--Sobic001G108400 Sobic002G151400--Sobic004G075900 Sobic002G151400--Sobic003G134500 Sobic002G151400--Sobic002G289800 Sobic003G085900 Sobic003G085900 Sobic002G128000--Sobic003G085900 Sobic002G128000--Sobic010G092400 Sobic002G237000 Sobic002G237000 Sobic002G128000--Sobic002G237000 Sobic004G327600 Sobic004G327600 Sobic002G128000--Sobic004G327600 Sobic002G128000--Sobic004G075900 Sobic001G105800 Sobic001G105800 Sobic002G128000--Sobic001G105800 Sobic002G128000--Sobic004G229200 Sobic002G128000--Sobic002G289800 Sobic002G178800 Sobic002G178800 Sobic002G128000--Sobic002G178800 Sobic010G008600 Sobic010G008600 Sobic009G194200--Sobic010G008600 Sobic001G436100 Sobic001G436100 Sobic009G194200--Sobic001G436100 Sobic004G261200 Sobic004G261200 Sobic009G194200--Sobic004G261200 Sobic003G410700 Sobic003G410700 Sobic009G194200--Sobic003G410700 Sobic001G061900 Sobic001G061900 Sobic009G194200--Sobic001G061900 Sobic006G242100 Sobic006G242100 Sobic009G194200--Sobic006G242100 Sobic004G262600 Sobic004G262600 Sobic009G194200--Sobic004G262600 Sobic010G101400 Sobic010G101400 Sobic009G194200--Sobic010G101400 Sobic001G038200 Sobic001G038200 Sobic009G194200--Sobic001G038200 Sobic006G205600 Sobic006G205600 Sobic001G321800--Sobic006G205600 Sobic004G257300 Sobic004G257300 Sobic001G321800--Sobic004G257300 Sobic001G209800 Sobic001G209800 Sobic001G321800--Sobic001G209800 Sobic010G030900 Sobic010G030900 Sobic001G321800--Sobic010G030900 Sobic001G476400 Sobic001G476400 Sobic001G321800--Sobic001G476400 Sobic001G464900 Sobic001G464900 Sobic001G321800--Sobic001G464900 Sobic007G223200 Sobic007G223200 Sobic001G321800--Sobic007G223200 Sobic006G110000 Sobic006G110000 Sobic001G321800--Sobic006G110000 Sobic001G473900 Sobic001G473900 Sobic001G321800--Sobic001G473900 Sobic004G075900--Sobic001G142000 Sobic004G075900--Sobic001G105800 Sobic007G007800 Sobic007G007800 Sobic004G075900--Sobic007G007800 Sobic001G013400 Sobic001G013400 Sobic004G075900--Sobic001G013400 Sobic004G331600 Sobic004G331600 Sobic004G075900--Sobic004G331600 Sobic007G100600 Sobic007G100600 Sobic004G075900--Sobic007G100600 Sobic003G444300 Sobic003G444300 Sobic004G075900--Sobic003G444300 Sobic004G075900--Sobic001G456500 Sobic003G387700 Sobic003G387700 Sobic004G075900--Sobic003G387700
Octagon: transcription factors


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