Gene annotation
Transcriptome id Sobic.009G242700.1
Synonym Sb09g029430
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
OsCML14 - Calmodulin-related calcium sensor protein, expressed
UniProt C5YW42
Pfam PF13499
Panther DB PTHR10891 PTHR10891:SF638
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology K13448; calcium-binding protein CML
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18530 : EF hand calcium-binding protein family
RAP-DB (Rice) LOC_Os05g50180.1 : OsCML14 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a044681 , Zm00025a028634 , Zm00025a034184
Brachypodium KQK04730 , KQK08623
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G242700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G399900 COBRA-like protein 7 precursor, putative, expressed -
2 Sobic.001G321800 OsRhmbd7 - Putative Rhomboid homologue, expressed -
3 Sobic.006G274400 harpin-induced protein 1 domain containing protein, expressed -
4 Sobic.006G158200 lectin-like receptor kinase, putative, expressed -
5 Sobic.001G138200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase 8 domain containing protein, putative, expressed -
6 Sobic.002G418000 expressed protein -
7 Sobic.006G205600 glycosyl hydrolases family 16, putative, expressed -
8 Sobic.006G070298 Cell wall invertase enzyme activity(PubMedID : 17293002) K01193: INV, beta-fructofuranosidase
9 Sobic.010G234000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
10 Sobic.004G032300 OsSGL(Ortholog in rice:Wang et al. (2016))(PubMedID : 31659876)@DUF1645 domain containing protein, putative, expressed -
11 Sobic.001G322200 hydrolase, alpha/beta fold family protein, putative, expressed -
12 Sobic.003G153600 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.010G230000 monocopper oxidase, putative, expressed -
14 Sobic.001G464900 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
15 Sobic.010G246400 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
16 Sobic.002G051700 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
17 Sobic.004G229200 phosphate-induced protein 1 conserved region domain containing protein, expressed -
18 Sobic.001G157700 PLA IIIA/PLP7, putative, expressed -
19 Sobic.001G515800 no apical meristem protein, putative, expressed -
20 Sobic.001G042500 expressed protein -


Gene co-expression network
sample Sobic009G242700 Sobic009G242700 Sobic001G399900 Sobic001G399900 Sobic009G242700--Sobic001G399900 Sobic001G321800 Sobic001G321800 Sobic009G242700--Sobic001G321800 Sobic006G274400 Sobic006G274400 Sobic009G242700--Sobic006G274400 Sobic006G158200 Sobic006G158200 Sobic009G242700--Sobic006G158200 Sobic001G138200 Sobic001G138200 Sobic009G242700--Sobic001G138200 Sobic002G418000 Sobic002G418000 Sobic009G242700--Sobic002G418000 Sobic006G205600 Sobic006G205600 Sobic009G242700--Sobic006G205600 Sobic006G070298 Sobic006G070298 Sobic009G242700--Sobic006G070298 Sobic010G234000 Sobic010G234000 Sobic009G242700--Sobic010G234000 Sobic001G399900--Sobic009G242700 Sobic001G399900--Sobic001G138200 Sobic001G399900--Sobic002G418000 Sobic001G322200 Sobic001G322200 Sobic001G399900--Sobic001G322200 Sobic001G399900--Sobic006G274400 Sobic004G246600 Sobic004G246600 Sobic001G399900--Sobic004G246600 Sobic004G286800 Sobic004G286800 Sobic001G399900--Sobic004G286800 Sobic001G219200 Sobic001G219200 Sobic001G399900--Sobic001G219200 Sobic001G399900--Sobic006G158200 Sobic001G321800--Sobic006G205600 Sobic004G257300 Sobic004G257300 Sobic001G321800--Sobic004G257300 Sobic001G209800 Sobic001G209800 Sobic001G321800--Sobic001G209800 Sobic010G030900 Sobic010G030900 Sobic001G321800--Sobic010G030900 Sobic001G476400 Sobic001G476400 Sobic001G321800--Sobic001G476400 Sobic001G464900 Sobic001G464900 Sobic001G321800--Sobic001G464900 Sobic007G223200 Sobic007G223200 Sobic001G321800--Sobic007G223200 Sobic006G110000 Sobic006G110000 Sobic001G321800--Sobic006G110000 Sobic001G473900 Sobic001G473900 Sobic001G321800--Sobic001G473900 Sobic006G274400--Sobic006G070298 Sobic006G159600 Sobic006G159600 Sobic006G274400--Sobic006G159600 Sobic002G385400 Sobic002G385400 Sobic006G274400--Sobic002G385400 Sobic006G274400--Sobic001G464900 Sobic002G051700 Sobic002G051700 Sobic006G274400--Sobic002G051700 Sobic001G399300 Sobic001G399300 Sobic006G274400--Sobic001G399300 Sobic001G162800 Sobic001G162800 Sobic006G274400--Sobic001G162800 Sobic006G274400--Sobic001G399900 Sobic006G274400--Sobic009G242700 Sobic006G158266 Sobic006G158266 Sobic006G158200--Sobic006G158266 Sobic003G146400 Sobic003G146400 Sobic006G158200--Sobic003G146400 Sobic004G306300 Sobic004G306300 Sobic006G158200--Sobic004G306300 Sobic006G158200--Sobic006G159600 Sobic006G158200--Sobic001G322200 Sobic006G158200--Sobic001G399300 Sobic001G371900 Sobic001G371900 Sobic006G158200--Sobic001G371900 Sobic006G263600 Sobic006G263600 Sobic006G158200--Sobic006G263600 Sobic001G055600 Sobic001G055600 Sobic006G158200--Sobic001G055600 Sobic002G269100 Sobic002G269100 Sobic001G138200--Sobic002G269100 Sobic001G100501 Sobic001G100501 Sobic001G138200--Sobic001G100501 Sobic002G388800 Sobic002G388800 Sobic001G138200--Sobic002G388800 Sobic002G225700 Sobic002G225700 Sobic001G138200--Sobic002G225700 Sobic001G138200--Sobic004G246600 Sobic001G295700 Sobic001G295700 Sobic001G138200--Sobic001G295700 Sobic004G097100 Sobic004G097100 Sobic001G138200--Sobic004G097100 Sobic003G207900 Sobic003G207900 Sobic001G138200--Sobic003G207900 Sobic001G143100 Sobic001G143100 Sobic001G138200--Sobic001G143100 Sobic003G415000 Sobic003G415000 Sobic002G418000--Sobic003G415000 Sobic002G418000--Sobic004G246600 Sobic004G229500 Sobic004G229500 Sobic002G418000--Sobic004G229500 Sobic004G308900 Sobic004G308900 Sobic002G418000--Sobic004G308900 Sobic007G148500 Sobic007G148500 Sobic002G418000--Sobic007G148500 Sobic007G122800 Sobic007G122800 Sobic002G418000--Sobic007G122800 Sobic002G184300 Sobic002G184300 Sobic002G418000--Sobic002G184300 Sobic009G032000 Sobic009G032000 Sobic002G418000--Sobic009G032000 Sobic003G049700 Sobic003G049700 Sobic002G418000--Sobic003G049700 Sobic006G205600--Sobic001G321800 Sobic006G205600--Sobic001G209800 Sobic006G205600--Sobic004G257300 Sobic006G205600--Sobic001G322200 Sobic004G280900 Sobic004G280900 Sobic006G205600--Sobic004G280900 Sobic006G231100 Sobic006G231100 Sobic006G205600--Sobic006G231100 Sobic005G037000 Sobic005G037000 Sobic006G205600--Sobic005G037000 Sobic001G077400 Sobic001G077400 Sobic006G205600--Sobic001G077400 Sobic001G173300 Sobic001G173300 Sobic006G205600--Sobic001G173300 Sobic006G070298--Sobic006G274400 Sobic002G359700 Sobic002G359700 Sobic006G070298--Sobic002G359700 Sobic006G070298--Sobic002G051700 Sobic001G189000 Sobic001G189000 Sobic006G070298--Sobic001G189000 Sobic006G070298--Sobic009G242700 Sobic004G063500 Sobic004G063500 Sobic006G070298--Sobic004G063500 Sobic005G064200 Sobic005G064200 Sobic006G070298--Sobic005G064200 Sobic010G196800 Sobic010G196800 Sobic006G070298--Sobic010G196800 Sobic006G070298--Sobic001G162800 Sobic004G032300 Sobic004G032300 Sobic010G234000--Sobic004G032300 Sobic006G273800 Sobic006G273800 Sobic010G234000--Sobic006G273800 Sobic010G023200 Sobic010G023200 Sobic010G234000--Sobic010G023200 Sobic008G042900 Sobic008G042900 Sobic010G234000--Sobic008G042900 Sobic007G077200 Sobic007G077200 Sobic010G234000--Sobic007G077200 Sobic009G217500 Sobic009G217500 Sobic010G234000--Sobic009G217500 Sobic003G416500 Sobic003G416500 Sobic010G234000--Sobic003G416500 Sobic007G122500 Sobic007G122500 Sobic010G234000--Sobic007G122500 Sobic010G234000--Sobic005G037000
Octagon: transcription factors


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