Gene annotation
Transcriptome id Sobic.002G418000.2
Synonym Sb02g042980
Functional annotation expressed protein
UniProt A0A1W0W7V8
Pfam -
Panther DB PTHR33165:SF4 PTHR33165
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g57830.1 : expressed protein
MaizeGDB (Corn) Zm00025a030930 , Zm00025a049156
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G415000 DUF567 domain containing protein, putative, expressed -
2 Sobic.004G246600 expressed protein -
3 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
4 Sobic.004G308900 AP2 domain containing protein, expressed -
5 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.007G122800 expressed protein -
7 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
8 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.003G049700 glyoxalase family protein, putative, expressed -
10 Sobic.002G358300 expressed protein -
11 Sobic.009G241801 - -
12 Sobic.006G170000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.001G143100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
14 Sobic.001G219200 myb-related protein Myb4, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.004G191400 - -
18 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
19 Sobic.009G205500 harpin-induced protein 1 domain containing protein, expressed -
20 Sobic.001G399900 COBRA-like protein 7 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G418000 Sobic002G418000 Sobic003G415000 Sobic003G415000 Sobic002G418000--Sobic003G415000 Sobic004G246600 Sobic004G246600 Sobic002G418000--Sobic004G246600 Sobic004G229500 Sobic004G229500 Sobic002G418000--Sobic004G229500 Sobic004G308900 Sobic004G308900 Sobic002G418000--Sobic004G308900 Sobic007G148500 Sobic007G148500 Sobic002G418000--Sobic007G148500 Sobic007G122800 Sobic007G122800 Sobic002G418000--Sobic007G122800 Sobic002G184300 Sobic002G184300 Sobic002G418000--Sobic002G184300 Sobic009G032000 Sobic009G032000 Sobic002G418000--Sobic009G032000 Sobic003G049700 Sobic003G049700 Sobic002G418000--Sobic003G049700 Sobic001G363400 Sobic001G363400 Sobic003G415000--Sobic001G363400 Sobic003G415000--Sobic007G122800 Sobic004G064500 Sobic004G064500 Sobic003G415000--Sobic004G064500 Sobic004G315200 Sobic004G315200 Sobic003G415000--Sobic004G315200 Sobic003G415000--Sobic002G184300 Sobic002G358300 Sobic002G358300 Sobic003G415000--Sobic002G358300 Sobic003G415000--Sobic007G148500 Sobic003G415000--Sobic004G246600 Sobic001G330400 Sobic001G330400 Sobic003G415000--Sobic001G330400 Sobic004G246600--Sobic004G229500 Sobic004G246600--Sobic009G032000 Sobic004G246600--Sobic004G308900 Sobic005G013500 Sobic005G013500 Sobic004G246600--Sobic005G013500 Sobic004G246600--Sobic002G358300 Sobic004G097100 Sobic004G097100 Sobic004G246600--Sobic004G097100 Sobic001G143100 Sobic001G143100 Sobic004G246600--Sobic001G143100 Sobic002G269100 Sobic002G269100 Sobic004G246600--Sobic002G269100 Sobic004G246600--Sobic002G184300 Sobic004G229500--Sobic004G246600 Sobic004G229500--Sobic005G013500 Sobic004G229500--Sobic004G097100 Sobic003G427800 Sobic003G427800 Sobic004G229500--Sobic003G427800 Sobic004G229500--Sobic009G032000 Sobic004G229500--Sobic004G308900 Sobic009G183900 Sobic009G183900 Sobic004G229500--Sobic009G183900 Sobic009G205500 Sobic009G205500 Sobic004G229500--Sobic009G205500 Sobic004G229500--Sobic002G184300 Sobic004G308900--Sobic002G358300 Sobic004G308900--Sobic007G122800 Sobic001G195200 Sobic001G195200 Sobic004G308900--Sobic001G195200 Sobic001G256700 Sobic001G256700 Sobic004G308900--Sobic001G256700 Sobic004G191400 Sobic004G191400 Sobic004G308900--Sobic004G191400 Sobic004G308900--Sobic009G032000 Sobic004G308900--Sobic004G246600 Sobic002G388900 Sobic002G388900 Sobic004G308900--Sobic002G388900 Sobic004G191300 Sobic004G191300 Sobic004G308900--Sobic004G191300 Sobic007G148500--Sobic004G246600 Sobic001G311900 Sobic001G311900 Sobic007G148500--Sobic001G311900 Sobic007G148500--Sobic001G143100 Sobic007G148500--Sobic004G229500 Sobic007G148500--Sobic005G013500 Sobic007G148500--Sobic009G205500 Sobic007G148500--Sobic007G122800 Sobic007G148500--Sobic002G269100 Sobic007G148500--Sobic002G184300 Sobic007G122800--Sobic002G358300 Sobic007G122800--Sobic004G308900 Sobic007G122800--Sobic004G191400 Sobic004G294400 Sobic004G294400 Sobic007G122800--Sobic004G294400 Sobic007G122800--Sobic004G191300 Sobic007G122800--Sobic001G195200 Sobic006G007900 Sobic006G007900 Sobic007G122800--Sobic006G007900 Sobic009G122400 Sobic009G122400 Sobic007G122800--Sobic009G122400 Sobic003G268600 Sobic003G268600 Sobic007G122800--Sobic003G268600 Sobic002G184300--Sobic001G363400 Sobic003G230100 Sobic003G230100 Sobic002G184300--Sobic003G230100 Sobic002G184300--Sobic002G358300 Sobic002G184300--Sobic004G097100 Sobic002G184300--Sobic009G032000 Sobic002G184300--Sobic009G205500 Sobic002G184300--Sobic004G246600 Sobic002G184300--Sobic005G013500 Sobic002G184300--Sobic004G308900 Sobic009G032000--Sobic001G256700 Sobic009G032000--Sobic002G388900 Sobic004G219800 Sobic004G219800 Sobic009G032000--Sobic004G219800 Sobic009G032000--Sobic002G358300 Sobic009G032000--Sobic004G308900 Sobic009G032000--Sobic004G246600 Sobic001G330100 Sobic001G330100 Sobic009G032000--Sobic001G330100 Sobic009G032000--Sobic005G013500 Sobic002G395300 Sobic002G395300 Sobic009G032000--Sobic002G395300 Sobic003G049700--Sobic004G191400 Sobic003G049700--Sobic007G122800 Sobic003G049700--Sobic004G064500 Sobic009G192600 Sobic009G192600 Sobic003G049700--Sobic009G192600 Sobic002G189100 Sobic002G189100 Sobic003G049700--Sobic002G189100 Sobic003G228900 Sobic003G228900 Sobic003G049700--Sobic003G228900 Sobic001G267600 Sobic001G267600 Sobic003G049700--Sobic001G267600 Sobic003G049700--Sobic006G007900 Sobic003G049700--Sobic002G358300
Octagon: transcription factors


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