Gene annotation
Transcriptome id Sobic.006G070298.1
Synonym SbIncw, cell wall invertase
Functional annotation Cell wall invertase enzyme activity (PubMedID : 17293002)
UniProt A0A125QUG5 , C6JS51 , C6JS52 , A2I9A1
Pfam PF08244 PF00251
Panther DB PTHR31953 PTHR31953:SF3
NCBI CDD -
KEGG Orthology K01193; INV, beta-fructofuranosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52600 : cell wall invertase 2
RAP-DB (Rice) LOC_Os04g33740.1 : glycosyl hydrolases, putative, expressed
MaizeGDB (Corn) Zm00025a056002 , Zm00025a056001 , Zm00025a025860 , Zm00025a011504 , Zm00025a020547 , Zm00025a018649
Brachypodium PNT73659 , KQJ99739 , KQK13342 , KQJ82524 , KQK11711 , KQJ99740
Barley HORVU2Hr1G073210.9 , HORVU2Hr1G073210.8 , HORVU2Hr1G073210.7 , HORVU2Hr1G073210.6 , HORVU2Hr1G073210.1 , HORVU4Hr1G086300.9 , HORVU4Hr1G086300.7 , HORVU4Hr1G086300.4 , HORVU4Hr1G086300.3 , HORVU4Hr1G086300.2 , HORVU4Hr1G086300.1 , HORVU4Hr1G086300.8 , HORVU4Hr1G086300.14 , HORVU4Hr1G086300.13 , HORVU4Hr1G086300.12 , HORVU4Hr1G086300.11 , HORVU4Hr1G086300.10 , HORVU4Hr1G011000.1 , HORVU2Hr1G073210.5 , HORVU2Hr1G073210.4 , HORVU2Hr1G073210.3 , HORVU2Hr1G073210.2
Wheat TraesCS2A02G386100 , TraesCS2A02G386100 , TraesCS2A02G386100 , TraesCS2D02G382600 , TraesCS5B02G557400 , TraesCS2D02G382600 , TraesCS2B02G403000 , TraesCS2D02G293200 , TraesCS4B02G356800 , TraesCS2B02G311900 , TraesCS2A02G295400 , TraesCS4A02G321400 , TraesCS4D02G350500 , TraesCS5A02G526200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G274400 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.002G359700 expression is supported by NCBI EST database(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.002G051700 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
4 Sobic.001G189000 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.009G242700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsCML14 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
6 Sobic.004G063500 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
7 Sobic.005G064200 eukaryotic aspartyl protease domain containing protein, expressed -
8 Sobic.010G196800 OsFBX436 - F-box domain containing protein, expressed -
9 Sobic.001G162800 expressed protein -
10 Sobic.003G146400 anther-specific protein SF18 precursor, putative, expressed -
11 Sobic.002G247900 hypothetical protein -
12 Sobic.001G042500 expressed protein -
13 Sobic.007G024150 - -
14 Sobic.010G181800 expressed protein -
15 Sobic.009G216800 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
16 Sobic.003G415000 DUF567 domain containing protein, putative, expressed -
17 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
18 Sobic.002G418000 expressed protein -
19 Sobic.008G181100 - -
20 Sobic.003G153600 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic006G070298 Sobic006G070298 Sobic006G274400 Sobic006G274400 Sobic006G070298--Sobic006G274400 Sobic002G359700 Sobic002G359700 Sobic006G070298--Sobic002G359700 Sobic002G051700 Sobic002G051700 Sobic006G070298--Sobic002G051700 Sobic001G189000 Sobic001G189000 Sobic006G070298--Sobic001G189000 Sobic009G242700 Sobic009G242700 Sobic006G070298--Sobic009G242700 Sobic004G063500 Sobic004G063500 Sobic006G070298--Sobic004G063500 Sobic005G064200 Sobic005G064200 Sobic006G070298--Sobic005G064200 Sobic010G196800 Sobic010G196800 Sobic006G070298--Sobic010G196800 Sobic001G162800 Sobic001G162800 Sobic006G070298--Sobic001G162800 Sobic006G274400--Sobic006G070298 Sobic006G159600 Sobic006G159600 Sobic006G274400--Sobic006G159600 Sobic002G385400 Sobic002G385400 Sobic006G274400--Sobic002G385400 Sobic001G464900 Sobic001G464900 Sobic006G274400--Sobic001G464900 Sobic006G274400--Sobic002G051700 Sobic001G399300 Sobic001G399300 Sobic006G274400--Sobic001G399300 Sobic006G274400--Sobic001G162800 Sobic001G399900 Sobic001G399900 Sobic006G274400--Sobic001G399900 Sobic006G274400--Sobic009G242700 Sobic002G359700--Sobic006G070298 Sobic002G359700--Sobic006G274400 Sobic002G359700--Sobic002G051700 Sobic002G359700--Sobic009G242700 Sobic002G359700--Sobic005G064200 Sobic004G075100 Sobic004G075100 Sobic002G359700--Sobic004G075100 Sobic002G113500 Sobic002G113500 Sobic002G359700--Sobic002G113500 Sobic001G042500 Sobic001G042500 Sobic002G359700--Sobic001G042500 Sobic002G359700--Sobic010G196800 Sobic002G407900 Sobic002G407900 Sobic002G051700--Sobic002G407900 Sobic006G158200 Sobic006G158200 Sobic002G051700--Sobic006G158200 Sobic002G051700--Sobic006G159600 Sobic002G051700--Sobic004G063500 Sobic001G055600 Sobic001G055600 Sobic002G051700--Sobic001G055600 Sobic003G063200 Sobic003G063200 Sobic002G051700--Sobic003G063200 Sobic004G259600 Sobic004G259600 Sobic002G051700--Sobic004G259600 Sobic002G348100 Sobic002G348100 Sobic002G051700--Sobic002G348100 Sobic003G325700 Sobic003G325700 Sobic002G051700--Sobic003G325700 Sobic002G294000 Sobic002G294000 Sobic001G189000--Sobic002G294000 Sobic002G092400 Sobic002G092400 Sobic001G189000--Sobic002G092400 Sobic003G136200 Sobic003G136200 Sobic001G189000--Sobic003G136200 Sobic006G158400 Sobic006G158400 Sobic001G189000--Sobic006G158400 Sobic006G159100 Sobic006G159100 Sobic001G189000--Sobic006G159100 Sobic006G009100 Sobic006G009100 Sobic001G189000--Sobic006G009100 Sobic003G426600 Sobic003G426600 Sobic001G189000--Sobic003G426600 Sobic009G015900 Sobic009G015900 Sobic001G189000--Sobic009G015900 Sobic006G191800 Sobic006G191800 Sobic001G189000--Sobic006G191800 Sobic009G242700--Sobic001G399900 Sobic001G321800 Sobic001G321800 Sobic009G242700--Sobic001G321800 Sobic009G242700--Sobic006G274400 Sobic009G242700--Sobic006G158200 Sobic001G138200 Sobic001G138200 Sobic009G242700--Sobic001G138200 Sobic002G418000 Sobic002G418000 Sobic009G242700--Sobic002G418000 Sobic006G205600 Sobic006G205600 Sobic009G242700--Sobic006G205600 Sobic009G242700--Sobic006G070298 Sobic010G234000 Sobic010G234000 Sobic009G242700--Sobic010G234000 Sobic009G120100 Sobic009G120100 Sobic004G063500--Sobic009G120100 Sobic004G063500--Sobic003G325700 Sobic004G063500--Sobic003G063200 Sobic001G066700 Sobic001G066700 Sobic004G063500--Sobic001G066700 Sobic010G266300 Sobic010G266300 Sobic004G063500--Sobic010G266300 Sobic009G216800 Sobic009G216800 Sobic004G063500--Sobic009G216800 Sobic003G403400 Sobic003G403400 Sobic004G063500--Sobic003G403400 Sobic004G063500--Sobic002G113500 Sobic006G231700 Sobic006G231700 Sobic004G063500--Sobic006G231700 Sobic007G018000 Sobic007G018000 Sobic005G064200--Sobic007G018000 Sobic003G324300 Sobic003G324300 Sobic005G064200--Sobic003G324300 Sobic004G318400 Sobic004G318400 Sobic005G064200--Sobic004G318400 Sobic007G208200 Sobic007G208200 Sobic005G064200--Sobic007G208200 Sobic005G098700 Sobic005G098700 Sobic005G064200--Sobic005G098700 Sobic001G050900 Sobic001G050900 Sobic005G064200--Sobic001G050900 Sobic009G199300 Sobic009G199300 Sobic005G064200--Sobic009G199300 Sobic007G194100 Sobic007G194100 Sobic005G064200--Sobic007G194100 Sobic005G064200--Sobic010G196800 Sobic010G196800--Sobic003G325700 Sobic009G131400 Sobic009G131400 Sobic010G196800--Sobic009G131400 Sobic010G196800--Sobic001G050900 Sobic003G146400 Sobic003G146400 Sobic010G196800--Sobic003G146400 Sobic010G196800--Sobic005G064200 Sobic008G111500 Sobic008G111500 Sobic010G196800--Sobic008G111500 Sobic010G196800--Sobic009G216800 Sobic009G170800 Sobic009G170800 Sobic010G196800--Sobic009G170800 Sobic001G389900 Sobic001G389900 Sobic010G196800--Sobic001G389900 Sobic001G347901 Sobic001G347901 Sobic001G162800--Sobic001G347901 Sobic009G233400 Sobic009G233400 Sobic001G162800--Sobic009G233400 Sobic006G108600 Sobic006G108600 Sobic001G162800--Sobic006G108600 Sobic006G013900 Sobic006G013900 Sobic001G162800--Sobic006G013900 Sobic002G054000 Sobic002G054000 Sobic001G162800--Sobic002G054000 Sobic009G173500 Sobic009G173500 Sobic001G162800--Sobic009G173500 Sobic008G135000 Sobic008G135000 Sobic001G162800--Sobic008G135000 Sobic010G076400 Sobic010G076400 Sobic001G162800--Sobic010G076400 Sobic004G342400 Sobic004G342400 Sobic001G162800--Sobic004G342400
Octagon: transcription factors


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