Gene annotation
Transcriptome id Sobic.002G247900.1
Synonym
Functional annotation hypothetical protein
UniProt C5X3X2
Pfam PF05922
Panther DB PTHR10795 PTHR10795:SF429
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g24510.1 : hypothetical protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G191500 protein transport protein Sec61 subunit beta, putative, expressed K09481: SEC61B, protein transport protein SEC61 subunit beta
2 Sobic.008G005000 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
3 Sobic.006G158200 lectin-like receptor kinase, putative, expressed -
4 Sobic.003G082200 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
5 Sobic.004G259600 slowmo homolog, putative, expressed -
6 Sobic.007G039600 aquaporin protein, putative, expressed K09874: aquaporin NIP
7 Sobic.001G365100 lipase, putative, expressed -
8 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
9 Sobic.001G219200 myb-related protein Myb4, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.007G030400 expressed protein -
11 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
12 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
13 Sobic.001G100600 expressed protein -
14 Sobic.006G159600 cytochrome b561, putative, expressed K08360: cytochrome b-561
15 Sobic.003G317100 expressed protein -
16 Sobic.002G074200 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
17 Sobic.010G259500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
18 Sobic.006G207100 expressed protein -
19 Sobic.001G433900 PLA IIIA/PLP7, putative, expressed -
20 Sobic.002G051700 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein


Gene co-expression network
sample Sobic002G247900 Sobic002G247900 Sobic003G191500 Sobic003G191500 Sobic002G247900--Sobic003G191500 Sobic008G005000 Sobic008G005000 Sobic002G247900--Sobic008G005000 Sobic006G158200 Sobic006G158200 Sobic002G247900--Sobic006G158200 Sobic003G082200 Sobic003G082200 Sobic002G247900--Sobic003G082200 Sobic004G259600 Sobic004G259600 Sobic002G247900--Sobic004G259600 Sobic007G039600 Sobic007G039600 Sobic002G247900--Sobic007G039600 Sobic001G365100 Sobic001G365100 Sobic002G247900--Sobic001G365100 Sobic004G229800 Sobic004G229800 Sobic002G247900--Sobic004G229800 Sobic001G219200 Sobic001G219200 Sobic002G247900--Sobic001G219200 Sobic003G317100 Sobic003G317100 Sobic003G191500--Sobic003G317100 Sobic003G072300 Sobic003G072300 Sobic003G191500--Sobic003G072300 Sobic009G063900 Sobic009G063900 Sobic003G191500--Sobic009G063900 Sobic004G205100 Sobic004G205100 Sobic003G191500--Sobic004G205100 Sobic003G041200 Sobic003G041200 Sobic003G191500--Sobic003G041200 Sobic003G352300 Sobic003G352300 Sobic003G191500--Sobic003G352300 Sobic002G104900 Sobic002G104900 Sobic003G191500--Sobic002G104900 Sobic006G084600 Sobic006G084600 Sobic003G191500--Sobic006G084600 Sobic003G191500--Sobic004G259600 Sobic008G005000--Sobic004G229800 Sobic008G005000--Sobic007G039600 Sobic001G435000 Sobic001G435000 Sobic008G005000--Sobic001G435000 Sobic006G234800 Sobic006G234800 Sobic008G005000--Sobic006G234800 Sobic008G005000--Sobic003G317100 Sobic003G286600 Sobic003G286600 Sobic008G005000--Sobic003G286600 Sobic008G005000--Sobic001G365100 Sobic010G259500 Sobic010G259500 Sobic008G005000--Sobic010G259500 Sobic002G336600 Sobic002G336600 Sobic008G005000--Sobic002G336600 Sobic006G158266 Sobic006G158266 Sobic006G158200--Sobic006G158266 Sobic003G146400 Sobic003G146400 Sobic006G158200--Sobic003G146400 Sobic004G306300 Sobic004G306300 Sobic006G158200--Sobic004G306300 Sobic006G159600 Sobic006G159600 Sobic006G158200--Sobic006G159600 Sobic001G322200 Sobic001G322200 Sobic006G158200--Sobic001G322200 Sobic001G399300 Sobic001G399300 Sobic006G158200--Sobic001G399300 Sobic001G371900 Sobic001G371900 Sobic006G158200--Sobic001G371900 Sobic006G263600 Sobic006G263600 Sobic006G158200--Sobic006G263600 Sobic001G055600 Sobic001G055600 Sobic006G158200--Sobic001G055600 Sobic003G082100 Sobic003G082100 Sobic003G082200--Sobic003G082100 Sobic003G082200--Sobic001G365100 Sobic008G170100 Sobic008G170100 Sobic003G082200--Sobic008G170100 Sobic003G082200--Sobic004G229800 Sobic003G082200--Sobic007G039600 Sobic009G139700 Sobic009G139700 Sobic003G082200--Sobic009G139700 Sobic010G084600 Sobic010G084600 Sobic003G082200--Sobic010G084600 Sobic003G082200--Sobic003G317100 Sobic007G057000 Sobic007G057000 Sobic003G082200--Sobic007G057000 Sobic004G247200 Sobic004G247200 Sobic004G259600--Sobic004G247200 Sobic002G348100 Sobic002G348100 Sobic004G259600--Sobic002G348100 Sobic003G063200 Sobic003G063200 Sobic004G259600--Sobic003G063200 Sobic005G168100 Sobic005G168100 Sobic004G259600--Sobic005G168100 Sobic004G259600--Sobic001G055600 Sobic009G232900 Sobic009G232900 Sobic004G259600--Sobic009G232900 Sobic002G372400 Sobic002G372400 Sobic004G259600--Sobic002G372400 Sobic010G204600 Sobic010G204600 Sobic004G259600--Sobic010G204600 Sobic005G028700 Sobic005G028700 Sobic004G259600--Sobic005G028700 Sobic007G039600--Sobic010G259500 Sobic007G039600--Sobic001G365100 Sobic007G030400 Sobic007G030400 Sobic007G039600--Sobic007G030400 Sobic007G039600--Sobic004G229800 Sobic003G307801 Sobic003G307801 Sobic007G039600--Sobic003G307801 Sobic008G158666 Sobic008G158666 Sobic007G039600--Sobic008G158666 Sobic005G051500 Sobic005G051500 Sobic007G039600--Sobic005G051500 Sobic001G018300 Sobic001G018300 Sobic007G039600--Sobic001G018300 Sobic003G265000 Sobic003G265000 Sobic007G039600--Sobic003G265000 Sobic001G365100--Sobic010G259500 Sobic007G155100 Sobic007G155100 Sobic001G365100--Sobic007G155100 Sobic001G365100--Sobic004G229800 Sobic001G365100--Sobic007G039600 Sobic001G365100--Sobic006G084600 Sobic001G365100--Sobic007G057000 Sobic001G365100--Sobic003G317100 Sobic003G437200 Sobic003G437200 Sobic001G365100--Sobic003G437200 Sobic010G066700 Sobic010G066700 Sobic001G365100--Sobic010G066700 Sobic004G229800--Sobic001G435000 Sobic007G036900 Sobic007G036900 Sobic004G229800--Sobic007G036900 Sobic004G229800--Sobic001G018300 Sobic004G229800--Sobic002G336600 Sobic004G141200 Sobic004G141200 Sobic004G229800--Sobic004G141200 Sobic002G188900 Sobic002G188900 Sobic004G229800--Sobic002G188900 Sobic004G208700 Sobic004G208700 Sobic004G229800--Sobic004G208700 Sobic004G004500 Sobic004G004500 Sobic004G229800--Sobic004G004500 Sobic002G140400 Sobic002G140400 Sobic004G229800--Sobic002G140400 Sobic004G108200 Sobic004G108200 Sobic001G219200--Sobic004G108200 Sobic001G219200--Sobic004G004500 Sobic001G256700 Sobic001G256700 Sobic001G219200--Sobic001G256700 Sobic003G148300 Sobic003G148300 Sobic001G219200--Sobic003G148300 Sobic002G339000 Sobic002G339000 Sobic001G219200--Sobic002G339000 Sobic006G207100 Sobic006G207100 Sobic001G219200--Sobic006G207100 Sobic004G219800 Sobic004G219800 Sobic001G219200--Sobic004G219800 Sobic009G144700 Sobic009G144700 Sobic001G219200--Sobic009G144700 Sobic008G187001 Sobic008G187001 Sobic001G219200--Sobic008G187001
Octagon: transcription factors


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