Gene annotation
Transcriptome id Sobic.003G082200.1
Synonym HSP18.2, Sb03g006900
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
hsp20/alpha crystallin family protein, putative, expressed
UniProt C5XQS2
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF152
NCBI CDD KOG0710; Molecular chaperone (small heat-shock protein Hsp26/Hsp42)
KEGG Orthology K13993; HSP20 family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G53540 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os01g04360.1 : hsp20/alpha crystallin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a052789 , Zm00025a023564 , Zm00025a023567 , Zm00025a023554 , Zm00025a023557 , Zm00025a001758 , Zm00025a001756 , Zm00025a035577 , Zm00025a001753
Brachypodium KQK04325 , KQK02573 , KQK02572 , KQK20327
Barley HORVU2Hr1G120170.1 , HORVU3Hr1G007380.1 , HORVU3Hr1G006530.1 , HORVU3Hr1G007500.1 , HORVU3Hr1G007500.2 , HORVU3Hr1G007500.4
Wheat TraesCS7D02G185500 , TraesCS7A02G183800 , TraesCS7B02G088700 , TraesCS7D02G185600 , TraesCS7B02G088600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G082100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
2 Sobic.001G365100 lipase, putative, expressed -
3 Sobic.008G170100 phospholipase, putative, expressed -
4 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
5 Sobic.007G039600 aquaporin protein, putative, expressed K09874: aquaporin NIP
6 Sobic.009G139700 - -
7 Sobic.010G084600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
8 Sobic.003G317100 expressed protein -
9 Sobic.007G057000 expressed protein -
10 Sobic.008G060050 - -
11 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
12 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
13 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
14 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
15 Sobic.007G030400 expressed protein -
16 Sobic.003G319700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
17 Sobic.007G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS8-14 - C2H2 zinc finger protein, expressed -
18 Sobic.006G234800 expressed protein -
19 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
20 Sobic.010G088700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -


Gene co-expression network
sample Sobic003G082200 Sobic003G082200 Sobic003G082100 Sobic003G082100 Sobic003G082200--Sobic003G082100 Sobic001G365100 Sobic001G365100 Sobic003G082200--Sobic001G365100 Sobic008G170100 Sobic008G170100 Sobic003G082200--Sobic008G170100 Sobic004G229800 Sobic004G229800 Sobic003G082200--Sobic004G229800 Sobic007G039600 Sobic007G039600 Sobic003G082200--Sobic007G039600 Sobic009G139700 Sobic009G139700 Sobic003G082200--Sobic009G139700 Sobic010G084600 Sobic010G084600 Sobic003G082200--Sobic010G084600 Sobic003G317100 Sobic003G317100 Sobic003G082200--Sobic003G317100 Sobic007G057000 Sobic007G057000 Sobic003G082200--Sobic007G057000 Sobic003G082100--Sobic003G082200 Sobic003G082100--Sobic008G170100 Sobic003G082100--Sobic001G365100 Sobic008G060050 Sobic008G060050 Sobic003G082100--Sobic008G060050 Sobic010G044400 Sobic010G044400 Sobic003G082100--Sobic010G044400 Sobic002G369301 Sobic002G369301 Sobic003G082100--Sobic002G369301 Sobic003G082100--Sobic003G317100 Sobic003G082100--Sobic004G229800 Sobic003G082100--Sobic007G039600 Sobic010G259500 Sobic010G259500 Sobic001G365100--Sobic010G259500 Sobic007G155100 Sobic007G155100 Sobic001G365100--Sobic007G155100 Sobic001G365100--Sobic004G229800 Sobic001G365100--Sobic007G039600 Sobic006G084600 Sobic006G084600 Sobic001G365100--Sobic006G084600 Sobic001G365100--Sobic007G057000 Sobic001G365100--Sobic003G317100 Sobic003G437200 Sobic003G437200 Sobic001G365100--Sobic003G437200 Sobic010G066700 Sobic010G066700 Sobic001G365100--Sobic010G066700 Sobic007G030400 Sobic007G030400 Sobic008G170100--Sobic007G030400 Sobic008G170100--Sobic003G082200 Sobic010G085500 Sobic010G085500 Sobic008G170100--Sobic010G085500 Sobic008G170100--Sobic003G082100 Sobic007G065900 Sobic007G065900 Sobic008G170100--Sobic007G065900 Sobic003G112300 Sobic003G112300 Sobic008G170100--Sobic003G112300 Sobic008G157800 Sobic008G157800 Sobic008G170100--Sobic008G157800 Sobic008G170100--Sobic009G139700 Sobic008G170100--Sobic007G039600 Sobic001G435000 Sobic001G435000 Sobic004G229800--Sobic001G435000 Sobic007G036900 Sobic007G036900 Sobic004G229800--Sobic007G036900 Sobic001G018300 Sobic001G018300 Sobic004G229800--Sobic001G018300 Sobic002G336600 Sobic002G336600 Sobic004G229800--Sobic002G336600 Sobic004G141200 Sobic004G141200 Sobic004G229800--Sobic004G141200 Sobic002G188900 Sobic002G188900 Sobic004G229800--Sobic002G188900 Sobic004G208700 Sobic004G208700 Sobic004G229800--Sobic004G208700 Sobic004G004500 Sobic004G004500 Sobic004G229800--Sobic004G004500 Sobic002G140400 Sobic002G140400 Sobic004G229800--Sobic002G140400 Sobic007G039600--Sobic010G259500 Sobic007G039600--Sobic001G365100 Sobic007G039600--Sobic007G030400 Sobic007G039600--Sobic004G229800 Sobic003G307801 Sobic003G307801 Sobic007G039600--Sobic003G307801 Sobic008G158666 Sobic008G158666 Sobic007G039600--Sobic008G158666 Sobic005G051500 Sobic005G051500 Sobic007G039600--Sobic005G051500 Sobic007G039600--Sobic001G018300 Sobic003G265000 Sobic003G265000 Sobic007G039600--Sobic003G265000 Sobic009G217700 Sobic009G217700 Sobic009G139700--Sobic009G217700 Sobic003G364000 Sobic003G364000 Sobic009G139700--Sobic003G364000 Sobic005G013600 Sobic005G013600 Sobic009G139700--Sobic005G013600 Sobic005G203100 Sobic005G203100 Sobic009G139700--Sobic005G203100 Sobic001G449600 Sobic001G449600 Sobic009G139700--Sobic001G449600 Sobic007G166000 Sobic007G166000 Sobic009G139700--Sobic007G166000 Sobic007G005700 Sobic007G005700 Sobic009G139700--Sobic007G005700 Sobic010G113600 Sobic010G113600 Sobic009G139700--Sobic010G113600 Sobic003G088500 Sobic003G088500 Sobic009G139700--Sobic003G088500 Sobic002G184200 Sobic002G184200 Sobic010G084600--Sobic002G184200 Sobic003G307300 Sobic003G307300 Sobic010G084600--Sobic003G307300 Sobic010G084600--Sobic006G084600 Sobic004G221500 Sobic004G221500 Sobic010G084600--Sobic004G221500 Sobic004G037000 Sobic004G037000 Sobic010G084600--Sobic004G037000 Sobic007G155200 Sobic007G155200 Sobic010G084600--Sobic007G155200 Sobic002G361100 Sobic002G361100 Sobic010G084600--Sobic002G361100 Sobic009G224100 Sobic009G224100 Sobic010G084600--Sobic009G224100 Sobic010G084600--Sobic001G365100 Sobic003G286600 Sobic003G286600 Sobic003G317100--Sobic003G286600 Sobic006G099900 Sobic006G099900 Sobic003G317100--Sobic006G099900 Sobic003G317100--Sobic006G084600 Sobic003G317100--Sobic004G221500 Sobic003G352300 Sobic003G352300 Sobic003G317100--Sobic003G352300 Sobic005G045900 Sobic005G045900 Sobic003G317100--Sobic005G045900 Sobic003G317100--Sobic001G435000 Sobic003G317100--Sobic010G044400 Sobic003G317100--Sobic004G229800 Sobic007G057000--Sobic010G066700 Sobic007G057000--Sobic002G188900 Sobic009G183400 Sobic009G183400 Sobic007G057000--Sobic009G183400 Sobic004G304625 Sobic004G304625 Sobic007G057000--Sobic004G304625 Sobic001G119400 Sobic001G119400 Sobic007G057000--Sobic001G119400 Sobic007G057000--Sobic007G155100 Sobic001G423800 Sobic001G423800 Sobic007G057000--Sobic001G423800 Sobic003G033900 Sobic003G033900 Sobic007G057000--Sobic003G033900 Sobic004G100700 Sobic004G100700 Sobic007G057000--Sobic004G100700
Octagon: transcription factors


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