Gene annotation
Transcriptome id Sobic.007G030400.1
Synonym Sb07g002650
Functional annotation expressed protein
UniProt C5YMY5
Pfam PF04578
Panther DB PTHR31325 PTHR31325:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45540 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os04g08080.1 : expressed protein
MaizeGDB (Corn) Zm00025a056529
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G039600 aquaporin protein, putative, expressed K09874: aquaporin NIP
2 Sobic.008G170100 phospholipase, putative, expressed -
3 Sobic.005G213500 leucoanthocyanidin dioxygenase, putative, expressed -
4 Sobic.010G085500 VIP1 protein, putative, expressed -
5 Sobic.004G319100 expressed protein -
6 Sobic.010G259500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
7 Sobic.010G043900 expressed protein -
8 Sobic.003G364950 - -
9 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
10 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
11 Sobic.001G238400 expansin precursor, putative, expressed -
12 Sobic.005G051500 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G365100 lipase, putative, expressed -
14 Sobic.004G292001 - -
15 Sobic.002G338450 - -
16 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.008G005000 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
18 Sobic.010G088700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
19 Sobic.008G158666 - -
20 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -


Gene co-expression network
sample Sobic007G030400 Sobic007G030400 Sobic007G039600 Sobic007G039600 Sobic007G030400--Sobic007G039600 Sobic008G170100 Sobic008G170100 Sobic007G030400--Sobic008G170100 Sobic005G213500 Sobic005G213500 Sobic007G030400--Sobic005G213500 Sobic010G085500 Sobic010G085500 Sobic007G030400--Sobic010G085500 Sobic004G319100 Sobic004G319100 Sobic007G030400--Sobic004G319100 Sobic010G259500 Sobic010G259500 Sobic007G030400--Sobic010G259500 Sobic010G043900 Sobic010G043900 Sobic007G030400--Sobic010G043900 Sobic003G364950 Sobic003G364950 Sobic007G030400--Sobic003G364950 Sobic003G364000 Sobic003G364000 Sobic007G030400--Sobic003G364000 Sobic007G039600--Sobic010G259500 Sobic001G365100 Sobic001G365100 Sobic007G039600--Sobic001G365100 Sobic007G039600--Sobic007G030400 Sobic004G229800 Sobic004G229800 Sobic007G039600--Sobic004G229800 Sobic003G307801 Sobic003G307801 Sobic007G039600--Sobic003G307801 Sobic008G158666 Sobic008G158666 Sobic007G039600--Sobic008G158666 Sobic005G051500 Sobic005G051500 Sobic007G039600--Sobic005G051500 Sobic001G018300 Sobic001G018300 Sobic007G039600--Sobic001G018300 Sobic003G265000 Sobic003G265000 Sobic007G039600--Sobic003G265000 Sobic008G170100--Sobic007G030400 Sobic003G082200 Sobic003G082200 Sobic008G170100--Sobic003G082200 Sobic008G170100--Sobic010G085500 Sobic003G082100 Sobic003G082100 Sobic008G170100--Sobic003G082100 Sobic007G065900 Sobic007G065900 Sobic008G170100--Sobic007G065900 Sobic003G112300 Sobic003G112300 Sobic008G170100--Sobic003G112300 Sobic008G157800 Sobic008G157800 Sobic008G170100--Sobic008G157800 Sobic009G139700 Sobic009G139700 Sobic008G170100--Sobic009G139700 Sobic008G170100--Sobic007G039600 Sobic010G156500 Sobic010G156500 Sobic005G213500--Sobic010G156500 Sobic005G213500--Sobic003G364000 Sobic005G213600 Sobic005G213600 Sobic005G213500--Sobic005G213600 Sobic003G364300 Sobic003G364300 Sobic005G213500--Sobic003G364300 Sobic006G132900 Sobic006G132900 Sobic005G213500--Sobic006G132900 Sobic002G338500 Sobic002G338500 Sobic005G213500--Sobic002G338500 Sobic005G213500--Sobic010G043900 Sobic005G213500--Sobic010G259500 Sobic005G005600 Sobic005G005600 Sobic005G213500--Sobic005G005600 Sobic010G085500--Sobic007G030400 Sobic010G085500--Sobic008G170100 Sobic010G085500--Sobic007G039600 Sobic010G085500--Sobic005G051500 Sobic010G085500--Sobic010G259500 Sobic002G368500 Sobic002G368500 Sobic010G085500--Sobic002G368500 Sobic010G085500--Sobic001G365100 Sobic005G011200 Sobic005G011200 Sobic010G085500--Sobic005G011200 Sobic010G085500--Sobic003G364000 Sobic004G319100--Sobic007G030400 Sobic001G238400 Sobic001G238400 Sobic004G319100--Sobic001G238400 Sobic004G319100--Sobic006G132900 Sobic004G319100--Sobic005G213500 Sobic004G319100--Sobic007G039600 Sobic004G318700 Sobic004G318700 Sobic004G319100--Sobic004G318700 Sobic002G183600 Sobic002G183600 Sobic004G319100--Sobic002G183600 Sobic008G020100 Sobic008G020100 Sobic004G319100--Sobic008G020100 Sobic004G319100--Sobic010G259500 Sobic010G259500--Sobic001G365100 Sobic001G402200 Sobic001G402200 Sobic010G259500--Sobic001G402200 Sobic010G259500--Sobic007G039600 Sobic010G259500--Sobic003G364000 Sobic007G155100 Sobic007G155100 Sobic010G259500--Sobic007G155100 Sobic010G259500--Sobic003G307801 Sobic010G066700 Sobic010G066700 Sobic010G259500--Sobic010G066700 Sobic010G088700 Sobic010G088700 Sobic010G259500--Sobic010G088700 Sobic010G259500--Sobic005G051500 Sobic010G043900--Sobic002G338500 Sobic008G027600 Sobic008G027600 Sobic010G043900--Sobic008G027600 Sobic002G422300 Sobic002G422300 Sobic010G043900--Sobic002G422300 Sobic010G043900--Sobic005G213600 Sobic006G158400 Sobic006G158400 Sobic010G043900--Sobic006G158400 Sobic010G043900--Sobic001G238400 Sobic003G026400 Sobic003G026400 Sobic010G043900--Sobic003G026400 Sobic003G043600 Sobic003G043600 Sobic010G043900--Sobic003G043600 Sobic010G043900--Sobic005G213500 Sobic006G214600 Sobic006G214600 Sobic003G364950--Sobic006G214600 Sobic003G364950--Sobic010G043900 Sobic004G292001 Sobic004G292001 Sobic003G364950--Sobic004G292001 Sobic004G278400 Sobic004G278400 Sobic003G364950--Sobic004G278400 Sobic003G364950--Sobic005G213500 Sobic003G364950--Sobic003G364300 Sobic003G364950--Sobic002G422300 Sobic003G364950--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic003G364950--Sobic002G004900 Sobic003G364000--Sobic010G088700 Sobic009G217700 Sobic009G217700 Sobic003G364000--Sobic009G217700 Sobic003G364000--Sobic010G156500 Sobic003G364000--Sobic003G364300 Sobic003G280200 Sobic003G280200 Sobic003G364000--Sobic003G280200 Sobic003G364000--Sobic010G259500 Sobic003G364000--Sobic005G213500 Sobic002G034800 Sobic002G034800 Sobic003G364000--Sobic002G034800 Sobic003G382600 Sobic003G382600 Sobic003G364000--Sobic003G382600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.