Gene annotation
Transcriptome id Sobic.008G181100.2
Synonym
Functional annotation -
UniProt A0A1B6PEW1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G088400 Up-reguralion under drought(PubMedID : 24916767)@BBTI11 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed -
2 Sobic.005G101700 dirigent, putative, expressed -
3 Sobic.001G318600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.005G101600 dirigent, putative, expressed -
5 Sobic.006G268800 transporter family protein, putative, expressed -
6 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
7 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
8 Sobic.010G211900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.004G148200 Cupin domain containing protein, expressed -
11 Sobic.004G316350 - -
12 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
14 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.005G206601 - -
16 Sobic.001G331200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
17 Sobic.006G010100 terpene synthase, putative, expressed -
18 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
19 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
20 Sobic.010G081100 lipase, putative, expressed -


Gene co-expression network
sample Sobic008G181100 Sobic008G181100 Sobic003G088400 Sobic003G088400 Sobic008G181100--Sobic003G088400 Sobic005G101700 Sobic005G101700 Sobic008G181100--Sobic005G101700 Sobic001G318600 Sobic001G318600 Sobic008G181100--Sobic001G318600 Sobic005G101600 Sobic005G101600 Sobic008G181100--Sobic005G101600 Sobic006G268800 Sobic006G268800 Sobic008G181100--Sobic006G268800 Sobic003G200700 Sobic003G200700 Sobic008G181100--Sobic003G200700 Sobic010G084100 Sobic010G084100 Sobic008G181100--Sobic010G084100 Sobic010G211900 Sobic010G211900 Sobic008G181100--Sobic010G211900 Sobic007G227300 Sobic007G227300 Sobic008G181100--Sobic007G227300 Sobic003G088400--Sobic008G181100 Sobic006G153100 Sobic006G153100 Sobic003G088400--Sobic006G153100 Sobic001G402050 Sobic001G402050 Sobic003G088400--Sobic001G402050 Sobic006G137800 Sobic006G137800 Sobic003G088400--Sobic006G137800 Sobic001G070800 Sobic001G070800 Sobic003G088400--Sobic001G070800 Sobic002G199650 Sobic002G199650 Sobic003G088400--Sobic002G199650 Sobic006G159600 Sobic006G159600 Sobic003G088400--Sobic006G159600 Sobic003G117600 Sobic003G117600 Sobic003G088400--Sobic003G117600 Sobic004G148200 Sobic004G148200 Sobic003G088400--Sobic004G148200 Sobic005G101700--Sobic005G101600 Sobic005G101700--Sobic001G318600 Sobic005G101700--Sobic003G200700 Sobic005G101700--Sobic007G227300 Sobic005G101800 Sobic005G101800 Sobic005G101700--Sobic005G101800 Sobic001G400800 Sobic001G400800 Sobic005G101700--Sobic001G400800 Sobic010G084400 Sobic010G084400 Sobic005G101700--Sobic010G084400 Sobic010G117900 Sobic010G117900 Sobic005G101700--Sobic010G117900 Sobic005G101700--Sobic004G148200 Sobic001G318600--Sobic005G101700 Sobic001G318600--Sobic005G101600 Sobic001G318600--Sobic006G268800 Sobic001G318600--Sobic007G227300 Sobic001G318600--Sobic003G200700 Sobic001G318600--Sobic004G148200 Sobic001G318600--Sobic001G400800 Sobic001G318600--Sobic010G084400 Sobic001G318600--Sobic010G084100 Sobic005G101600--Sobic005G101700 Sobic005G101600--Sobic001G318600 Sobic005G101600--Sobic001G400800 Sobic005G101600--Sobic007G227300 Sobic005G206601 Sobic005G206601 Sobic005G101600--Sobic005G206601 Sobic005G101600--Sobic005G101800 Sobic005G101600--Sobic010G084400 Sobic003G437100 Sobic003G437100 Sobic005G101600--Sobic003G437100 Sobic005G101600--Sobic003G200700 Sobic006G103000 Sobic006G103000 Sobic006G268800--Sobic006G103000 Sobic006G268800--Sobic007G227300 Sobic006G268800--Sobic003G200700 Sobic006G268800--Sobic004G148200 Sobic001G402200 Sobic001G402200 Sobic006G268800--Sobic001G402200 Sobic006G268800--Sobic010G211900 Sobic006G268800--Sobic001G318600 Sobic009G145500 Sobic009G145500 Sobic006G268800--Sobic009G145500 Sobic001G331200 Sobic001G331200 Sobic006G268800--Sobic001G331200 Sobic003G200700--Sobic007G227300 Sobic003G200700--Sobic006G268800 Sobic003G200700--Sobic010G211900 Sobic003G200700--Sobic004G148200 Sobic003G264400 Sobic003G264400 Sobic003G200700--Sobic003G264400 Sobic006G099900 Sobic006G099900 Sobic003G200700--Sobic006G099900 Sobic001G231400 Sobic001G231400 Sobic003G200700--Sobic001G231400 Sobic003G200700--Sobic005G101800 Sobic004G243100 Sobic004G243100 Sobic003G200700--Sobic004G243100 Sobic010G084700 Sobic010G084700 Sobic010G084100--Sobic010G084700 Sobic004G071650 Sobic004G071650 Sobic010G084100--Sobic004G071650 Sobic005G045900 Sobic005G045900 Sobic010G084100--Sobic005G045900 Sobic004G221500 Sobic004G221500 Sobic010G084100--Sobic004G221500 Sobic003G286600 Sobic003G286600 Sobic010G084100--Sobic003G286600 Sobic001G192200 Sobic001G192200 Sobic010G084100--Sobic001G192200 Sobic002G184200 Sobic002G184200 Sobic010G084100--Sobic002G184200 Sobic007G067400 Sobic007G067400 Sobic010G084100--Sobic007G067400 Sobic010G084100--Sobic006G099900 Sobic010G211900--Sobic001G402200 Sobic010G211900--Sobic003G200700 Sobic010G211900--Sobic007G227300 Sobic010G211900--Sobic006G103000 Sobic010G211900--Sobic006G268800 Sobic010G211900--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic010G211900--Sobic001G018300 Sobic001G367600 Sobic001G367600 Sobic010G211900--Sobic001G367600 Sobic010G042500 Sobic010G042500 Sobic010G211900--Sobic010G042500 Sobic007G227300--Sobic006G099900 Sobic007G227300--Sobic003G200700 Sobic007G227300--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic007G227300--Sobic003G252800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic007G227300--Sobic004G148200 Sobic009G240600 Sobic009G240600 Sobic007G227300--Sobic009G240600 Sobic007G227300--Sobic005G206601
Octagon: transcription factors


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