Gene annotation
Transcriptome id Sobic.002G359700.1
Synonym lateral organ boundaries, SbLBD14, LBD37, Sb02g038030, ASL39
Functional annotation expression is supported by NCBI EST database (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt C5XD46
Pfam PF03195
Panther DB PTHR31304 PTHR31304:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67420 : LOB domain-containing protein 37
RAP-DB (Rice) LOC_Os07g40000.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a048595 , Zm00025a015069 , Zm00025a023631 , Zm00025a007419 , Zm00025a002995
Brachypodium KQK15457 , KQK14217
Barley HORVU4Hr1G013380.1 , HORVU4Hr1G013380.3 , HORVU4Hr1G013380.5 , HORVU4Hr1G013380.4 , HORVU4Hr1G013380.6 , HORVU4Hr1G013380.2
Wheat TraesCS2A02G194500 , TraesCS2B02G212400 , TraesCS4A02G236200 , TraesCS4D02G077600 , TraesCS4B02G078800 , TraesCS2D02G193400 , TraesCS2D02G193400
Populus -


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cDNA sequences
Sobic.002G359700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G070298 Cell wall invertase enzyme activity(PubMedID : 17293002) K01193: INV, beta-fructofuranosidase
2 Sobic.006G274400 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.002G051700 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
4 Sobic.009G242700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsCML14 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
5 Sobic.005G064200 eukaryotic aspartyl protease domain containing protein, expressed -
6 Sobic.004G075100 - -
7 Sobic.002G113500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
8 Sobic.001G042500 expressed protein -
9 Sobic.010G196800 OsFBX436 - F-box domain containing protein, expressed -
10 Sobic.002G247900 hypothetical protein -
11 Sobic.001G321800 OsRhmbd7 - Putative Rhomboid homologue, expressed -
12 Sobic.006G158200 lectin-like receptor kinase, putative, expressed -
13 Sobic.010G181800 expressed protein -
14 Sobic.006G251200 proton-dependent oligopeptide transport, putative, expressed -
15 Sobic.007G018000 expansin precursor, putative, expressed -
16 Sobic.003G146400 anther-specific protein SF18 precursor, putative, expressed -
17 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
18 Sobic.006G205600 glycosyl hydrolases family 16, putative, expressed -
19 Sobic.006G159600 cytochrome b561, putative, expressed K08360: cytochrome b-561
20 Sobic.007G012400 - -


Gene co-expression network
sample Sobic002G359700 Sobic002G359700 Sobic006G070298 Sobic006G070298 Sobic002G359700--Sobic006G070298 Sobic006G274400 Sobic006G274400 Sobic002G359700--Sobic006G274400 Sobic002G051700 Sobic002G051700 Sobic002G359700--Sobic002G051700 Sobic009G242700 Sobic009G242700 Sobic002G359700--Sobic009G242700 Sobic005G064200 Sobic005G064200 Sobic002G359700--Sobic005G064200 Sobic004G075100 Sobic004G075100 Sobic002G359700--Sobic004G075100 Sobic002G113500 Sobic002G113500 Sobic002G359700--Sobic002G113500 Sobic001G042500 Sobic001G042500 Sobic002G359700--Sobic001G042500 Sobic010G196800 Sobic010G196800 Sobic002G359700--Sobic010G196800 Sobic006G070298--Sobic006G274400 Sobic006G070298--Sobic002G359700 Sobic006G070298--Sobic002G051700 Sobic001G189000 Sobic001G189000 Sobic006G070298--Sobic001G189000 Sobic006G070298--Sobic009G242700 Sobic004G063500 Sobic004G063500 Sobic006G070298--Sobic004G063500 Sobic006G070298--Sobic005G064200 Sobic006G070298--Sobic010G196800 Sobic001G162800 Sobic001G162800 Sobic006G070298--Sobic001G162800 Sobic006G274400--Sobic006G070298 Sobic006G159600 Sobic006G159600 Sobic006G274400--Sobic006G159600 Sobic002G385400 Sobic002G385400 Sobic006G274400--Sobic002G385400 Sobic001G464900 Sobic001G464900 Sobic006G274400--Sobic001G464900 Sobic006G274400--Sobic002G051700 Sobic001G399300 Sobic001G399300 Sobic006G274400--Sobic001G399300 Sobic006G274400--Sobic001G162800 Sobic001G399900 Sobic001G399900 Sobic006G274400--Sobic001G399900 Sobic006G274400--Sobic009G242700 Sobic002G407900 Sobic002G407900 Sobic002G051700--Sobic002G407900 Sobic006G158200 Sobic006G158200 Sobic002G051700--Sobic006G158200 Sobic002G051700--Sobic006G159600 Sobic002G051700--Sobic004G063500 Sobic001G055600 Sobic001G055600 Sobic002G051700--Sobic001G055600 Sobic003G063200 Sobic003G063200 Sobic002G051700--Sobic003G063200 Sobic004G259600 Sobic004G259600 Sobic002G051700--Sobic004G259600 Sobic002G348100 Sobic002G348100 Sobic002G051700--Sobic002G348100 Sobic003G325700 Sobic003G325700 Sobic002G051700--Sobic003G325700 Sobic009G242700--Sobic001G399900 Sobic001G321800 Sobic001G321800 Sobic009G242700--Sobic001G321800 Sobic009G242700--Sobic006G274400 Sobic009G242700--Sobic006G158200 Sobic001G138200 Sobic001G138200 Sobic009G242700--Sobic001G138200 Sobic002G418000 Sobic002G418000 Sobic009G242700--Sobic002G418000 Sobic006G205600 Sobic006G205600 Sobic009G242700--Sobic006G205600 Sobic009G242700--Sobic006G070298 Sobic010G234000 Sobic010G234000 Sobic009G242700--Sobic010G234000 Sobic007G018000 Sobic007G018000 Sobic005G064200--Sobic007G018000 Sobic003G324300 Sobic003G324300 Sobic005G064200--Sobic003G324300 Sobic004G318400 Sobic004G318400 Sobic005G064200--Sobic004G318400 Sobic007G208200 Sobic007G208200 Sobic005G064200--Sobic007G208200 Sobic005G098700 Sobic005G098700 Sobic005G064200--Sobic005G098700 Sobic001G050900 Sobic001G050900 Sobic005G064200--Sobic001G050900 Sobic009G199300 Sobic009G199300 Sobic005G064200--Sobic009G199300 Sobic007G194100 Sobic007G194100 Sobic005G064200--Sobic007G194100 Sobic005G064200--Sobic010G196800 Sobic003G191500 Sobic003G191500 Sobic004G075100--Sobic003G191500 Sobic002G338250 Sobic002G338250 Sobic004G075100--Sobic002G338250 Sobic009G216800 Sobic009G216800 Sobic004G075100--Sobic009G216800 Sobic002G362000 Sobic002G362000 Sobic004G075100--Sobic002G362000 Sobic009G063900 Sobic009G063900 Sobic004G075100--Sobic009G063900 Sobic001G389900 Sobic001G389900 Sobic004G075100--Sobic001G389900 Sobic003G357100 Sobic003G357100 Sobic004G075100--Sobic003G357100 Sobic004G075100--Sobic004G259600 Sobic006G239300 Sobic006G239300 Sobic004G075100--Sobic006G239300 Sobic001G154400 Sobic001G154400 Sobic002G113500--Sobic001G154400 Sobic002G113500--Sobic003G325700 Sobic002G113500--Sobic004G063500 Sobic002G239200 Sobic002G239200 Sobic002G113500--Sobic002G239200 Sobic002G113500--Sobic001G399300 Sobic003G146400 Sobic003G146400 Sobic002G113500--Sobic003G146400 Sobic010G030900 Sobic010G030900 Sobic002G113500--Sobic010G030900 Sobic004G102900 Sobic004G102900 Sobic002G113500--Sobic004G102900 Sobic002G113500--Sobic009G216800 Sobic001G042500--Sobic001G399300 Sobic001G042500--Sobic003G146400 Sobic001G042500--Sobic006G158200 Sobic001G042500--Sobic002G113500 Sobic001G347901 Sobic001G347901 Sobic001G042500--Sobic001G347901 Sobic009G179500 Sobic009G179500 Sobic001G042500--Sobic009G179500 Sobic001G042500--Sobic003G325700 Sobic007G074200 Sobic007G074200 Sobic001G042500--Sobic007G074200 Sobic001G042500--Sobic002G348100 Sobic010G196800--Sobic003G325700 Sobic009G131400 Sobic009G131400 Sobic010G196800--Sobic009G131400 Sobic010G196800--Sobic001G050900 Sobic010G196800--Sobic003G146400 Sobic010G196800--Sobic005G064200 Sobic008G111500 Sobic008G111500 Sobic010G196800--Sobic008G111500 Sobic010G196800--Sobic009G216800 Sobic009G170800 Sobic009G170800 Sobic010G196800--Sobic009G170800 Sobic010G196800--Sobic001G389900
Octagon: transcription factors


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