Gene annotation
Transcriptome id Sobic.001G042500.1
Synonym Sb01g003910
Functional annotation expressed protein
UniProt C5WW09
Pfam -
Panther DB PTHR35105 PTHR35105:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64980 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os10g37230.1 : expressed protein
MaizeGDB (Corn) Zm00025a008727 , Zm00025a032943
Brachypodium KQJ97392 , KQK19255 , KQK19260
Barley HORVU7Hr1G030690.2 , HORVU7Hr1G030690.1 , HORVU1Hr1G047000.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G042500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
2 Sobic.003G146400 anther-specific protein SF18 precursor, putative, expressed -
3 Sobic.006G158200 lectin-like receptor kinase, putative, expressed -
4 Sobic.002G113500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
5 Sobic.001G347901 - -
6 Sobic.009G179500 expressed protein -
7 Sobic.003G325700 expressed protein -
8 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
9 Sobic.002G348100 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
10 Sobic.006G013900 RNA polymerase subunit, putative, expressed K03008: RPB11, DNA-directed RNA polymerase II subunit RPB11
11 Sobic.004G024200 similar to Bax inhibitor 1(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@transmembrane BAX inhibitor motif-containing protein, putative, expressed -
12 Sobic.001G154400 expp1 protein precursor, putative, expressed -
13 Sobic.006G271300 C2 domain(PubMedID : 29491869)@C2 domain containing protein, putative, expressed -
14 Sobic.001G371900 copper/zinc superoxide dismutase(PubMedID : 23915383)@copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
15 Sobic.009G216800 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
16 Sobic.001G162800 expressed protein -
17 Sobic.002G051700 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
18 Sobic.001G488000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.010G196800 OsFBX436 - F-box domain containing protein, expressed -
20 Sobic.009G179400 expressed protein -


Gene co-expression network
sample Sobic001G042500 Sobic001G042500 Sobic001G399300 Sobic001G399300 Sobic001G042500--Sobic001G399300 Sobic003G146400 Sobic003G146400 Sobic001G042500--Sobic003G146400 Sobic006G158200 Sobic006G158200 Sobic001G042500--Sobic006G158200 Sobic002G113500 Sobic002G113500 Sobic001G042500--Sobic002G113500 Sobic001G347901 Sobic001G347901 Sobic001G042500--Sobic001G347901 Sobic009G179500 Sobic009G179500 Sobic001G042500--Sobic009G179500 Sobic003G325700 Sobic003G325700 Sobic001G042500--Sobic003G325700 Sobic007G074200 Sobic007G074200 Sobic001G042500--Sobic007G074200 Sobic002G348100 Sobic002G348100 Sobic001G042500--Sobic002G348100 Sobic001G399300--Sobic001G042500 Sobic001G399300--Sobic006G158200 Sobic007G195800 Sobic007G195800 Sobic001G399300--Sobic007G195800 Sobic006G159600 Sobic006G159600 Sobic001G399300--Sobic006G159600 Sobic001G429000 Sobic001G429000 Sobic001G399300--Sobic001G429000 Sobic001G399300--Sobic003G146400 Sobic001G399300--Sobic002G348100 Sobic009G216800 Sobic009G216800 Sobic001G399300--Sobic009G216800 Sobic001G399300--Sobic002G113500 Sobic003G146400--Sobic009G179500 Sobic009G184000 Sobic009G184000 Sobic003G146400--Sobic009G184000 Sobic004G306300 Sobic004G306300 Sobic003G146400--Sobic004G306300 Sobic003G146400--Sobic007G074200 Sobic003G432700 Sobic003G432700 Sobic003G146400--Sobic003G432700 Sobic006G007900 Sobic006G007900 Sobic003G146400--Sobic006G007900 Sobic003G146400--Sobic006G158200 Sobic001G079300 Sobic001G079300 Sobic003G146400--Sobic001G079300 Sobic006G235100 Sobic006G235100 Sobic003G146400--Sobic006G235100 Sobic006G158266 Sobic006G158266 Sobic006G158200--Sobic006G158266 Sobic006G158200--Sobic003G146400 Sobic006G158200--Sobic004G306300 Sobic006G158200--Sobic006G159600 Sobic001G322200 Sobic001G322200 Sobic006G158200--Sobic001G322200 Sobic006G158200--Sobic001G399300 Sobic001G371900 Sobic001G371900 Sobic006G158200--Sobic001G371900 Sobic006G263600 Sobic006G263600 Sobic006G158200--Sobic006G263600 Sobic001G055600 Sobic001G055600 Sobic006G158200--Sobic001G055600 Sobic001G154400 Sobic001G154400 Sobic002G113500--Sobic001G154400 Sobic002G113500--Sobic003G325700 Sobic004G063500 Sobic004G063500 Sobic002G113500--Sobic004G063500 Sobic002G239200 Sobic002G239200 Sobic002G113500--Sobic002G239200 Sobic002G113500--Sobic001G399300 Sobic002G113500--Sobic003G146400 Sobic010G030900 Sobic010G030900 Sobic002G113500--Sobic010G030900 Sobic004G102900 Sobic004G102900 Sobic002G113500--Sobic004G102900 Sobic002G113500--Sobic009G216800 Sobic004G342400 Sobic004G342400 Sobic001G347901--Sobic004G342400 Sobic002G308300 Sobic002G308300 Sobic001G347901--Sobic002G308300 Sobic009G016500 Sobic009G016500 Sobic001G347901--Sobic009G016500 Sobic009G179100 Sobic009G179100 Sobic001G347901--Sobic009G179100 Sobic001G370700 Sobic001G370700 Sobic001G347901--Sobic001G370700 Sobic009G233400 Sobic009G233400 Sobic001G347901--Sobic009G233400 Sobic002G415500 Sobic002G415500 Sobic001G347901--Sobic002G415500 Sobic009G173500 Sobic009G173500 Sobic001G347901--Sobic009G173500 Sobic001G334300 Sobic001G334300 Sobic001G347901--Sobic001G334300 Sobic003G313800 Sobic003G313800 Sobic009G179500--Sobic003G313800 Sobic009G179500--Sobic004G306300 Sobic001G138600 Sobic001G138600 Sobic009G179500--Sobic001G138600 Sobic007G213800 Sobic007G213800 Sobic009G179500--Sobic007G213800 Sobic006G190100 Sobic006G190100 Sobic009G179500--Sobic006G190100 Sobic001G459800 Sobic001G459800 Sobic009G179500--Sobic001G459800 Sobic003G148600 Sobic003G148600 Sobic009G179500--Sobic003G148600 Sobic004G065500 Sobic004G065500 Sobic009G179500--Sobic004G065500 Sobic009G183300 Sobic009G183300 Sobic009G179500--Sobic009G183300 Sobic003G325700--Sobic004G063500 Sobic003G325700--Sobic003G146400 Sobic010G196800 Sobic010G196800 Sobic003G325700--Sobic010G196800 Sobic003G325700--Sobic002G113500 Sobic003G063200 Sobic003G063200 Sobic003G325700--Sobic003G063200 Sobic003G325700--Sobic006G158200 Sobic008G111500 Sobic008G111500 Sobic003G325700--Sobic008G111500 Sobic004G247200 Sobic004G247200 Sobic003G325700--Sobic004G247200 Sobic009G131400 Sobic009G131400 Sobic003G325700--Sobic009G131400 Sobic007G074200--Sobic008G111500 Sobic002G393600 Sobic002G393600 Sobic007G074200--Sobic002G393600 Sobic002G338250 Sobic002G338250 Sobic007G074200--Sobic002G338250 Sobic001G447100 Sobic001G447100 Sobic007G074200--Sobic001G447100 Sobic004G117600 Sobic004G117600 Sobic007G074200--Sobic004G117600 Sobic007G074200--Sobic009G131400 Sobic007G074200--Sobic003G146400 Sobic003G349700 Sobic003G349700 Sobic007G074200--Sobic003G349700 Sobic009G154200 Sobic009G154200 Sobic007G074200--Sobic009G154200 Sobic002G372400 Sobic002G372400 Sobic002G348100--Sobic002G372400 Sobic001G175300 Sobic001G175300 Sobic002G348100--Sobic001G175300 Sobic003G078200 Sobic003G078200 Sobic002G348100--Sobic003G078200 Sobic002G348100--Sobic001G055600 Sobic009G242300 Sobic009G242300 Sobic002G348100--Sobic009G242300 Sobic006G137800 Sobic006G137800 Sobic002G348100--Sobic006G137800 Sobic009G054800 Sobic009G054800 Sobic002G348100--Sobic009G054800 Sobic004G198400 Sobic004G198400 Sobic002G348100--Sobic004G198400 Sobic004G055100 Sobic004G055100 Sobic002G348100--Sobic004G055100
Octagon: transcription factors


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