Gene annotation
Transcriptome id Sobic.003G153600.1,Sobic.003G153600.2
Synonym Sb03g013400
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1B6Q3D7 , C5XJR3
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF158
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G09390 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g22780.2 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a024422
Brachypodium PNT70452 , KQK04206
Barley HORVU2Hr1G101510.1 , HORVU2Hr1G101510.10 , HORVU2Hr1G101510.2 , HORVU2Hr1G101510.3 , HORVU2Hr1G101510.7 , HORVU2Hr1G101510.4 , HORVU2Hr1G101510.5 , HORVU2Hr1G101510.8 , HORVU2Hr1G101510.9
Wheat TraesCS2D02G433400 , TraesCS2D02G433400 , TraesCS2A02G436500 , TraesCS2A02G436500 , TraesCS2B02G456700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G230000 monocopper oxidase, putative, expressed -
2 Sobic.007G176800 acyl carrier protein, putative, expressed -
3 Sobic.004G238700 CSLA6 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
4 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
5 Sobic.009G227600 aspartyl protease family protein, putative, expressed -
6 Sobic.004G355500 RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
7 Sobic.007G214700 fasciclin domain containing protein, expressed -
8 Sobic.005G088100 expressed protein -
9 Sobic.001G403100 laccase precursor protein, putative, expressed K05909: laccase
10 Sobic.006G274400 harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.002G372200 hydrolase protein, putative, expressed -
12 Sobic.004G051401 - -
13 Sobic.004G279601 - K11254: histone H4
14 Sobic.006G116500 expressed protein -
15 Sobic.002G360301 - -
16 Sobic.009G242700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsCML14 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
17 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
18 Sobic.006G271300 C2 domain(PubMedID : 29491869)@C2 domain containing protein, putative, expressed -
19 Sobic.003G134500 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
20 Sobic.002G258300 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic003G153600 Sobic003G153600 Sobic010G230000 Sobic010G230000 Sobic003G153600--Sobic010G230000 Sobic007G176800 Sobic007G176800 Sobic003G153600--Sobic007G176800 Sobic004G238700 Sobic004G238700 Sobic003G153600--Sobic004G238700 Sobic002G385400 Sobic002G385400 Sobic003G153600--Sobic002G385400 Sobic009G227600 Sobic009G227600 Sobic003G153600--Sobic009G227600 Sobic004G355500 Sobic004G355500 Sobic003G153600--Sobic004G355500 Sobic007G214700 Sobic007G214700 Sobic003G153600--Sobic007G214700 Sobic005G088100 Sobic005G088100 Sobic003G153600--Sobic005G088100 Sobic001G403100 Sobic001G403100 Sobic003G153600--Sobic001G403100 Sobic010G204700 Sobic010G204700 Sobic010G230000--Sobic010G204700 Sobic001G456500 Sobic001G456500 Sobic010G230000--Sobic001G456500 Sobic010G230000--Sobic004G238700 Sobic004G229200 Sobic004G229200 Sobic010G230000--Sobic004G229200 Sobic001G142000 Sobic001G142000 Sobic010G230000--Sobic001G142000 Sobic006G081800 Sobic006G081800 Sobic010G230000--Sobic006G081800 Sobic004G075900 Sobic004G075900 Sobic010G230000--Sobic004G075900 Sobic010G230000--Sobic007G176800 Sobic002G128000 Sobic002G128000 Sobic010G230000--Sobic002G128000 Sobic006G134900 Sobic006G134900 Sobic007G176800--Sobic006G134900 Sobic003G442300 Sobic003G442300 Sobic007G176800--Sobic003G442300 Sobic001G261549 Sobic001G261549 Sobic007G176800--Sobic001G261549 Sobic009G189200 Sobic009G189200 Sobic007G176800--Sobic009G189200 Sobic007G176800--Sobic007G214700 Sobic007G176800--Sobic010G230000 Sobic007G176800--Sobic004G355500 Sobic005G047000 Sobic005G047000 Sobic007G176800--Sobic005G047000 Sobic001G169800 Sobic001G169800 Sobic007G176800--Sobic001G169800 Sobic004G238700--Sobic010G230000 Sobic001G439400 Sobic001G439400 Sobic004G238700--Sobic001G439400 Sobic004G238700--Sobic007G176800 Sobic004G238700--Sobic001G142000 Sobic004G238700--Sobic001G456500 Sobic006G116500 Sobic006G116500 Sobic004G238700--Sobic006G116500 Sobic004G238700--Sobic010G204700 Sobic002G258300 Sobic002G258300 Sobic004G238700--Sobic002G258300 Sobic004G238700--Sobic009G227600 Sobic004G217450 Sobic004G217450 Sobic002G385400--Sobic004G217450 Sobic010G023900 Sobic010G023900 Sobic002G385400--Sobic010G023900 Sobic002G385400--Sobic002G258300 Sobic004G342400 Sobic004G342400 Sobic002G385400--Sobic004G342400 Sobic003G084300 Sobic003G084300 Sobic002G385400--Sobic003G084300 Sobic005G080900 Sobic005G080900 Sobic002G385400--Sobic005G080900 Sobic003G034600 Sobic003G034600 Sobic002G385400--Sobic003G034600 Sobic004G274900 Sobic004G274900 Sobic002G385400--Sobic004G274900 Sobic006G115000 Sobic006G115000 Sobic002G385400--Sobic006G115000 Sobic009G227600--Sobic001G403100 Sobic007G152900 Sobic007G152900 Sobic009G227600--Sobic007G152900 Sobic001G070300 Sobic001G070300 Sobic009G227600--Sobic001G070300 Sobic009G227600--Sobic004G355500 Sobic009G227600--Sobic004G238700 Sobic004G271500 Sobic004G271500 Sobic009G227600--Sobic004G271500 Sobic009G227600--Sobic006G116500 Sobic002G191000 Sobic002G191000 Sobic009G227600--Sobic002G191000 Sobic001G103000 Sobic001G103000 Sobic009G227600--Sobic001G103000 Sobic004G355500--Sobic006G116500 Sobic004G355500--Sobic001G456500 Sobic004G355500--Sobic007G152900 Sobic010G103700 Sobic010G103700 Sobic004G355500--Sobic010G103700 Sobic004G355500--Sobic001G169800 Sobic004G197400 Sobic004G197400 Sobic004G355500--Sobic004G197400 Sobic009G088200 Sobic009G088200 Sobic004G355500--Sobic009G088200 Sobic004G355500--Sobic001G103000 Sobic008G129200 Sobic008G129200 Sobic004G355500--Sobic008G129200 Sobic004G285900 Sobic004G285900 Sobic007G214700--Sobic004G285900 Sobic007G214700--Sobic001G261549 Sobic001G300400 Sobic001G300400 Sobic007G214700--Sobic001G300400 Sobic004G279601 Sobic004G279601 Sobic007G214700--Sobic004G279601 Sobic007G214700--Sobic007G176800 Sobic001G078600 Sobic001G078600 Sobic007G214700--Sobic001G078600 Sobic002G179150 Sobic002G179150 Sobic007G214700--Sobic002G179150 Sobic002G162300 Sobic002G162300 Sobic007G214700--Sobic002G162300 Sobic004G313200 Sobic004G313200 Sobic007G214700--Sobic004G313200 Sobic010G007600 Sobic010G007600 Sobic005G088100--Sobic010G007600 Sobic002G277500 Sobic002G277500 Sobic005G088100--Sobic002G277500 Sobic009G180400 Sobic009G180400 Sobic005G088100--Sobic009G180400 Sobic007G024150 Sobic007G024150 Sobic005G088100--Sobic007G024150 Sobic007G138900 Sobic007G138900 Sobic005G088100--Sobic007G138900 Sobic001G396600 Sobic001G396600 Sobic005G088100--Sobic001G396600 Sobic002G080700 Sobic002G080700 Sobic005G088100--Sobic002G080700 Sobic005G077700 Sobic005G077700 Sobic005G088100--Sobic005G077700 Sobic003G216901 Sobic003G216901 Sobic005G088100--Sobic003G216901 Sobic001G403100--Sobic009G227600 Sobic002G208000 Sobic002G208000 Sobic001G403100--Sobic002G208000 Sobic003G415400 Sobic003G415400 Sobic001G403100--Sobic003G415400 Sobic004G009900 Sobic004G009900 Sobic001G403100--Sobic004G009900 Sobic003G236600 Sobic003G236600 Sobic001G403100--Sobic003G236600 Sobic001G403100--Sobic007G152900 Sobic001G403100--Sobic003G153600 Sobic006G133300 Sobic006G133300 Sobic001G403100--Sobic006G133300 Sobic006G003100 Sobic006G003100 Sobic001G403100--Sobic006G003100
Octagon: transcription factors


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