Gene annotation
Transcriptome id Sobic.001G403100.1
Synonym LAC5, Sb01g038130
Functional annotation laccase precursor protein, putative, expressed
UniProt C5WNF8
Pfam PF00394 PF07732 PF07731
Panther DB PTHR11709 PTHR11709:SF96
NCBI CDD -
KEGG Orthology K05909; laccase
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT2G40370 : laccase 5
RAP-DB (Rice) LOC_Os01g61160.1 : laccase precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a022105 , Zm00025a029611 , Zm00025a033185 , Zm00025a033285 , Zm00025a039744 , Zm00025a026840 , Zm00025a002044 , Zm00025a027016 , Zm00025a026839
Brachypodium KQJ92617 , KQK10535 , KQK10391 , KQK22086 , KQK05918
Barley HORVU1Hr1G072530.2 , HORVU1Hr1G072530.1 , HORVU1Hr1G072530.7 , HORVU1Hr1G072530.4 , HORVU1Hr1G072530.5 , HORVU1Hr1G072530.8 , HORVU1Hr1G072530.9 , HORVU4Hr1G055140.1 , HORVU4Hr1G055140.2 , HORVU5Hr1G047480.10 , HORVU3Hr1G086200.8 , HORVU3Hr1G086200.5 , HORVU3Hr1G086200.4 , HORVU3Hr1G086200.7 , HORVU3Hr1G086200.6 , HORVU3Hr1G086200.1 , HORVU3Hr1G086200.3 , HORVU3Hr1G086200.2 , HORVU2Hr1G002440.4 , HORVU2Hr1G002440.3 , HORVU3Hr1G088140.1 , HORVU3Hr1G088140.2 , HORVU4Hr1G055140.3 , HORVU4Hr1G055140.5 , HORVU4Hr1G055140.4 , HORVU3Hr1G088150.2 , HORVU3Hr1G088150.1 , HORVU3Hr1G086100.9 , HORVU3Hr1G086100.2 , HORVU3Hr1G086100.3 , HORVU3Hr1G086100.1 , HORVU3Hr1G086100.6 , HORVU3Hr1G086100.7 , HORVU3Hr1G086100.4 , HORVU3Hr1G086100.5 , HORVU3Hr1G086100.8 , HORVU5Hr1G047480.6 , HORVU5Hr1G047480.7 , HORVU5Hr1G047480.3 , HORVU5Hr1G047480.9
Wheat TraesCS5D02G156500 , TraesCS1D02G282600 , TraesCS1B02G293100 , TraesCS3A02G348000 , TraesCS2D02G267200 , TraesCS3B02G393500 , TraesCS3B02G379900 , TraesCS3D02G354200 , TraesCS2A02G255500 , TraesCS3B02G392700 , TraesCS3A02G360400 , TraesCS3D02G354900 , TraesCS3A02G361100 , TraesCS5A02G151400 , TraesCS5B02G149900 , TraesCS1D02G283000 , TraesCS1A02G283900 , TraesCS5D02G031400 , TraesCS5A02G025000 , TraesCS6A02G304900 , TraesCS4D02G190900 , TraesCS4A02G114700 , TraesCS3B02G393000 , TraesCS4B02G189500 , TraesCS2D02G016800 , TraesCS2D02G016800 , TraesCS2B02G287000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G227600 aspartyl protease family protein, putative, expressed -
2 Sobic.002G208000 expressed protein -
3 Sobic.003G415400 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
4 Sobic.004G009900 auxin-induced protein 5NG4, putative, expressed -
5 Sobic.003G236600 expressed protein -
6 Sobic.007G152900 POLE2A - Putative DNA polymerase epsilon complex subunit, expressed K02325: DNA polymerase epsilon subunit 2
7 Sobic.003G153600 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.006G133300 expressed protein -
9 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
10 Sobic.004G238700 CSLA6 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
11 Sobic.002G094600 "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@"cellulose synthase A2, incorporate UDP-sugars into cellulose"(PubMedID : 28944535)@CESA6 - cellulose synthase, expressed K10999: cellulose synthase A
12 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
13 Sobic.001G421000 protein phosphatase 2C, putative, expressed -
14 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
16 Sobic.003G205600 uncharacterized protein At4g06744 precursor, putative, expressed -
17 Sobic.003G152000 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
19 Sobic.001G522200 - -
20 Sobic.003G064800 dirigent, putative, expressed -


Gene co-expression network
sample Sobic001G403100 Sobic001G403100 Sobic009G227600 Sobic009G227600 Sobic001G403100--Sobic009G227600 Sobic002G208000 Sobic002G208000 Sobic001G403100--Sobic002G208000 Sobic003G415400 Sobic003G415400 Sobic001G403100--Sobic003G415400 Sobic004G009900 Sobic004G009900 Sobic001G403100--Sobic004G009900 Sobic003G236600 Sobic003G236600 Sobic001G403100--Sobic003G236600 Sobic007G152900 Sobic007G152900 Sobic001G403100--Sobic007G152900 Sobic003G153600 Sobic003G153600 Sobic001G403100--Sobic003G153600 Sobic006G133300 Sobic006G133300 Sobic001G403100--Sobic006G133300 Sobic006G003100 Sobic006G003100 Sobic001G403100--Sobic006G003100 Sobic009G227600--Sobic001G403100 Sobic009G227600--Sobic007G152900 Sobic001G070300 Sobic001G070300 Sobic009G227600--Sobic001G070300 Sobic004G355500 Sobic004G355500 Sobic009G227600--Sobic004G355500 Sobic004G238700 Sobic004G238700 Sobic009G227600--Sobic004G238700 Sobic004G271500 Sobic004G271500 Sobic009G227600--Sobic004G271500 Sobic006G116500 Sobic006G116500 Sobic009G227600--Sobic006G116500 Sobic002G191000 Sobic002G191000 Sobic009G227600--Sobic002G191000 Sobic001G103000 Sobic001G103000 Sobic009G227600--Sobic001G103000 Sobic003G152000 Sobic003G152000 Sobic002G208000--Sobic003G152000 Sobic002G208000--Sobic001G403100 Sobic009G095800 Sobic009G095800 Sobic002G208000--Sobic009G095800 Sobic003G045900 Sobic003G045900 Sobic002G208000--Sobic003G045900 Sobic008G010500 Sobic008G010500 Sobic002G208000--Sobic008G010500 Sobic003G007400 Sobic003G007400 Sobic002G208000--Sobic003G007400 Sobic010G214300 Sobic010G214300 Sobic002G208000--Sobic010G214300 Sobic001G231800 Sobic001G231800 Sobic002G208000--Sobic001G231800 Sobic005G206000 Sobic005G206000 Sobic002G208000--Sobic005G206000 Sobic004G258900 Sobic004G258900 Sobic003G415400--Sobic004G258900 Sobic005G041300 Sobic005G041300 Sobic003G415400--Sobic005G041300 Sobic006G282300 Sobic006G282300 Sobic003G415400--Sobic006G282300 Sobic002G216100 Sobic002G216100 Sobic003G415400--Sobic002G216100 Sobic008G102800 Sobic008G102800 Sobic003G415400--Sobic008G102800 Sobic010G096400 Sobic010G096400 Sobic003G415400--Sobic010G096400 Sobic004G139300 Sobic004G139300 Sobic003G415400--Sobic004G139300 Sobic007G178900 Sobic007G178900 Sobic003G415400--Sobic007G178900 Sobic002G101400 Sobic002G101400 Sobic003G415400--Sobic002G101400 Sobic001G295000 Sobic001G295000 Sobic004G009900--Sobic001G295000 Sobic006G100501 Sobic006G100501 Sobic004G009900--Sobic006G100501 Sobic003G349400 Sobic003G349400 Sobic004G009900--Sobic003G349400 Sobic003G132400 Sobic003G132400 Sobic004G009900--Sobic003G132400 Sobic001G111300 Sobic001G111300 Sobic004G009900--Sobic001G111300 Sobic007G019900 Sobic007G019900 Sobic004G009900--Sobic007G019900 Sobic002G085800 Sobic002G085800 Sobic004G009900--Sobic002G085800 Sobic008G145900 Sobic008G145900 Sobic004G009900--Sobic008G145900 Sobic006G150100 Sobic006G150100 Sobic004G009900--Sobic006G150100 Sobic003G236600--Sobic008G102800 Sobic006G028500 Sobic006G028500 Sobic003G236600--Sobic006G028500 Sobic003G140700 Sobic003G140700 Sobic003G236600--Sobic003G140700 Sobic009G199001 Sobic009G199001 Sobic003G236600--Sobic009G199001 Sobic004G322100 Sobic004G322100 Sobic003G236600--Sobic004G322100 Sobic001G238000 Sobic001G238000 Sobic003G236600--Sobic001G238000 Sobic002G094600 Sobic002G094600 Sobic003G236600--Sobic002G094600 Sobic004G110700 Sobic004G110700 Sobic003G236600--Sobic004G110700 Sobic004G306900 Sobic004G306900 Sobic003G236600--Sobic004G306900 Sobic007G152900--Sobic004G355500 Sobic010G103700 Sobic010G103700 Sobic007G152900--Sobic010G103700 Sobic007G152900--Sobic006G116500 Sobic009G088200 Sobic009G088200 Sobic007G152900--Sobic009G088200 Sobic007G152900--Sobic001G070300 Sobic010G274000 Sobic010G274000 Sobic007G152900--Sobic010G274000 Sobic006G140100 Sobic006G140100 Sobic007G152900--Sobic006G140100 Sobic002G280700 Sobic002G280700 Sobic007G152900--Sobic002G280700 Sobic007G152900--Sobic001G103000 Sobic010G230000 Sobic010G230000 Sobic003G153600--Sobic010G230000 Sobic007G176800 Sobic007G176800 Sobic003G153600--Sobic007G176800 Sobic003G153600--Sobic004G238700 Sobic002G385400 Sobic002G385400 Sobic003G153600--Sobic002G385400 Sobic003G153600--Sobic009G227600 Sobic003G153600--Sobic004G355500 Sobic007G214700 Sobic007G214700 Sobic003G153600--Sobic007G214700 Sobic005G088100 Sobic005G088100 Sobic003G153600--Sobic005G088100 Sobic003G153600--Sobic001G403100 Sobic001G499900 Sobic001G499900 Sobic006G133300--Sobic001G499900 Sobic010G191600 Sobic010G191600 Sobic006G133300--Sobic010G191600 Sobic007G206800 Sobic007G206800 Sobic006G133300--Sobic007G206800 Sobic002G391400 Sobic002G391400 Sobic006G133300--Sobic002G391400 Sobic009G065700 Sobic009G065700 Sobic006G133300--Sobic009G065700 Sobic005G217766 Sobic005G217766 Sobic006G133300--Sobic005G217766 Sobic001G414800 Sobic001G414800 Sobic006G133300--Sobic001G414800 Sobic003G167300 Sobic003G167300 Sobic006G133300--Sobic003G167300 Sobic010G191700 Sobic010G191700 Sobic006G133300--Sobic010G191700 Sobic003G000100 Sobic003G000100 Sobic006G003100--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic006G003100--Sobic010G152400 Sobic010G031700 Sobic010G031700 Sobic006G003100--Sobic010G031700 Sobic004G106100 Sobic004G106100 Sobic006G003100--Sobic004G106100 Sobic007G086300 Sobic007G086300 Sobic006G003100--Sobic007G086300 Sobic002G233200 Sobic002G233200 Sobic006G003100--Sobic002G233200 Sobic006G003100--Sobic004G322100 Sobic006G003100--Sobic004G306900 Sobic007G158800 Sobic007G158800 Sobic006G003100--Sobic007G158800
Octagon: transcription factors


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