Gene annotation
Transcriptome id Sobic.003G415400.1
Synonym Sb03g044920, RALFL33
Functional annotation RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed
UniProt A0A1B6Q822
Pfam PF05498
Panther DB PTHR33136 PTHR33136:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G15800 : ralf-like 33
RAP-DB (Rice) LOC_Os01g25560.1 : RALFL7 - Rapid ALkalinization Factor RALF family protein precursor, expressed
MaizeGDB (Corn) Zm00025a049122 , Zm00025a039204 , Zm00025a039203
Brachypodium PNT73526
Barley HORVU2Hr1G019770.1 , HORVU3Hr1G097790.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G258900 - -
2 Sobic.005G041300 amino acid permease family protein, putative, expressed -
3 Sobic.006G282300 - -
4 Sobic.002G216100 cytochrome P450, putative, expressed -
5 Sobic.008G102800 expressed protein -
6 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
7 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
8 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
9 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
10 Sobic.003G183600 Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@SPX domain-containing protein, putative, expressed -
11 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.004G234100 phosphoglycerate mutase, putative, expressed -
13 Sobic.003G232400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.008G055100 dirigent, putative, expressed -
15 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
16 Sobic.008G048400 citrate-binding protein precursor, putative, expressed -
17 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G403100 laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family


Gene co-expression network
sample Sobic003G415400 Sobic003G415400 Sobic004G258900 Sobic004G258900 Sobic003G415400--Sobic004G258900 Sobic005G041300 Sobic005G041300 Sobic003G415400--Sobic005G041300 Sobic006G282300 Sobic006G282300 Sobic003G415400--Sobic006G282300 Sobic002G216100 Sobic002G216100 Sobic003G415400--Sobic002G216100 Sobic008G102800 Sobic008G102800 Sobic003G415400--Sobic008G102800 Sobic010G096400 Sobic010G096400 Sobic003G415400--Sobic010G096400 Sobic004G139300 Sobic004G139300 Sobic003G415400--Sobic004G139300 Sobic007G178900 Sobic007G178900 Sobic003G415400--Sobic007G178900 Sobic002G101400 Sobic002G101400 Sobic003G415400--Sobic002G101400 Sobic007G050200 Sobic007G050200 Sobic004G258900--Sobic007G050200 Sobic004G258900--Sobic005G041300 Sobic004G258900--Sobic002G216100 Sobic001G430100 Sobic001G430100 Sobic004G258900--Sobic001G430100 Sobic005G065900 Sobic005G065900 Sobic004G258900--Sobic005G065900 Sobic002G404100 Sobic002G404100 Sobic004G258900--Sobic002G404100 Sobic009G221500 Sobic009G221500 Sobic004G258900--Sobic009G221500 Sobic004G258900--Sobic002G101400 Sobic010G148800 Sobic010G148800 Sobic004G258900--Sobic010G148800 Sobic005G041300--Sobic001G430100 Sobic005G041300--Sobic004G258900 Sobic008G034700 Sobic008G034700 Sobic005G041300--Sobic008G034700 Sobic006G183900 Sobic006G183900 Sobic005G041300--Sobic006G183900 Sobic001G455100 Sobic001G455100 Sobic005G041300--Sobic001G455100 Sobic005G041300--Sobic010G096400 Sobic008G035800 Sobic008G035800 Sobic005G041300--Sobic008G035800 Sobic004G348800 Sobic004G348800 Sobic005G041300--Sobic004G348800 Sobic002G365600 Sobic002G365600 Sobic005G041300--Sobic002G365600 Sobic002G365550 Sobic002G365550 Sobic006G282300--Sobic002G365550 Sobic004G071000 Sobic004G071000 Sobic006G282300--Sobic004G071000 Sobic002G365801 Sobic002G365801 Sobic006G282300--Sobic002G365801 Sobic006G028400 Sobic006G028400 Sobic006G282300--Sobic006G028400 Sobic008G055100 Sobic008G055100 Sobic006G282300--Sobic008G055100 Sobic006G282300--Sobic010G096400 Sobic010G212500 Sobic010G212500 Sobic006G282300--Sobic010G212500 Sobic003G119500 Sobic003G119500 Sobic006G282300--Sobic003G119500 Sobic006G282300--Sobic007G178900 Sobic002G216100--Sobic004G139300 Sobic002G216100--Sobic002G404100 Sobic002G216100--Sobic007G178900 Sobic010G113100 Sobic010G113100 Sobic002G216100--Sobic010G113100 Sobic007G176000 Sobic007G176000 Sobic002G216100--Sobic007G176000 Sobic002G185800 Sobic002G185800 Sobic002G216100--Sobic002G185800 Sobic001G360500 Sobic001G360500 Sobic002G216100--Sobic001G360500 Sobic005G046700 Sobic005G046700 Sobic002G216100--Sobic005G046700 Sobic002G042200 Sobic002G042200 Sobic002G216100--Sobic002G042200 Sobic006G256900 Sobic006G256900 Sobic008G102800--Sobic006G256900 Sobic003G236600 Sobic003G236600 Sobic008G102800--Sobic003G236600 Sobic002G001700 Sobic002G001700 Sobic008G102800--Sobic002G001700 Sobic008G102800--Sobic001G430100 Sobic008G102800--Sobic009G221500 Sobic006G197100 Sobic006G197100 Sobic008G102800--Sobic006G197100 Sobic010G138300 Sobic010G138300 Sobic008G102800--Sobic010G138300 Sobic009G199001 Sobic009G199001 Sobic008G102800--Sobic009G199001 Sobic001G264000 Sobic001G264000 Sobic008G102800--Sobic001G264000 Sobic010G096400--Sobic008G055100 Sobic010G096400--Sobic004G139300 Sobic010G096400--Sobic002G365550 Sobic010G096400--Sobic002G365801 Sobic009G088500 Sobic009G088500 Sobic010G096400--Sobic009G088500 Sobic010G096400--Sobic002G216100 Sobic010G096400--Sobic001G360500 Sobic002G368300 Sobic002G368300 Sobic010G096400--Sobic002G368300 Sobic010G096400--Sobic007G176000 Sobic004G139300--Sobic002G216100 Sobic004G139300--Sobic002G042200 Sobic004G139300--Sobic002G001700 Sobic004G139300--Sobic002G185800 Sobic004G139300--Sobic010G096400 Sobic004G139300--Sobic006G197100 Sobic004G139300--Sobic007G178900 Sobic004G139300--Sobic007G176000 Sobic003G351600 Sobic003G351600 Sobic004G139300--Sobic003G351600 Sobic007G178900--Sobic007G176000 Sobic007G178900--Sobic002G216100 Sobic007G178900--Sobic004G139300 Sobic007G178900--Sobic002G185800 Sobic007G178900--Sobic005G046700 Sobic007G178900--Sobic002G368300 Sobic007G178900--Sobic006G197100 Sobic007G178900--Sobic008G055100 Sobic007G176100 Sobic007G176100 Sobic007G178900--Sobic007G176100 Sobic002G101400--Sobic010G113100 Sobic002G101400--Sobic001G360500 Sobic002G101400--Sobic005G046700 Sobic006G092700 Sobic006G092700 Sobic002G101400--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic002G101400--Sobic007G170300 Sobic003G053600 Sobic003G053600 Sobic002G101400--Sobic003G053600 Sobic007G073000 Sobic007G073000 Sobic002G101400--Sobic007G073000 Sobic007G057400 Sobic007G057400 Sobic002G101400--Sobic007G057400 Sobic010G028100 Sobic010G028100 Sobic002G101400--Sobic010G028100
Octagon: transcription factors


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