Gene annotation
Transcriptome id Sobic.002G208000.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QCL7
Pfam -
Panther DB PTHR33124 PTHR33124:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g25860.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G152000 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.001G403100 laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.009G095800 DUF623 domain containing protein, expressed -
4 Sobic.003G045900 gibberellin 3-beta-dioxygenase 2-2, putative, expressed K04124: gibberellin 3beta-dioxygenase
5 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G007400 expressed protein -
7 Sobic.010G214300 - -
8 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
9 Sobic.005G206000 dirigent, putative, expressed -
10 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
11 Sobic.001G522200 - -
12 Sobic.005G177100 glycosyl hydrolase, putative, expressed -
13 Sobic.004G121600 expansin precursor, putative, expressed -
14 Sobic.003G082800 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
15 Sobic.004G121800 expansin precursor, putative, expressed -
16 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.003G236600 expressed protein -
18 Sobic.010G268700 expansin precursor, putative, expressed -
19 Sobic.001G272800 NBS-LRR disease resistance protein, putative, expressed -
20 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic002G208000 Sobic002G208000 Sobic003G152000 Sobic003G152000 Sobic002G208000--Sobic003G152000 Sobic001G403100 Sobic001G403100 Sobic002G208000--Sobic001G403100 Sobic009G095800 Sobic009G095800 Sobic002G208000--Sobic009G095800 Sobic003G045900 Sobic003G045900 Sobic002G208000--Sobic003G045900 Sobic008G010500 Sobic008G010500 Sobic002G208000--Sobic008G010500 Sobic003G007400 Sobic003G007400 Sobic002G208000--Sobic003G007400 Sobic010G214300 Sobic010G214300 Sobic002G208000--Sobic010G214300 Sobic001G231800 Sobic001G231800 Sobic002G208000--Sobic001G231800 Sobic005G206000 Sobic005G206000 Sobic002G208000--Sobic005G206000 Sobic003G441800 Sobic003G441800 Sobic003G152000--Sobic003G441800 Sobic003G053200 Sobic003G053200 Sobic003G152000--Sobic003G053200 Sobic009G181600 Sobic009G181600 Sobic003G152000--Sobic009G181600 Sobic004G029400 Sobic004G029400 Sobic003G152000--Sobic004G029400 Sobic003G319400 Sobic003G319400 Sobic003G152000--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic003G152000--Sobic005G202300 Sobic006G205700 Sobic006G205700 Sobic003G152000--Sobic006G205700 Sobic007G037600 Sobic007G037600 Sobic003G152000--Sobic007G037600 Sobic004G121600 Sobic004G121600 Sobic003G152000--Sobic004G121600 Sobic009G227600 Sobic009G227600 Sobic001G403100--Sobic009G227600 Sobic001G403100--Sobic002G208000 Sobic003G415400 Sobic003G415400 Sobic001G403100--Sobic003G415400 Sobic004G009900 Sobic004G009900 Sobic001G403100--Sobic004G009900 Sobic003G236600 Sobic003G236600 Sobic001G403100--Sobic003G236600 Sobic007G152900 Sobic007G152900 Sobic001G403100--Sobic007G152900 Sobic003G153600 Sobic003G153600 Sobic001G403100--Sobic003G153600 Sobic006G133300 Sobic006G133300 Sobic001G403100--Sobic006G133300 Sobic006G003100 Sobic006G003100 Sobic001G403100--Sobic006G003100 Sobic010G268700 Sobic010G268700 Sobic009G095800--Sobic010G268700 Sobic007G015000 Sobic007G015000 Sobic009G095800--Sobic007G015000 Sobic007G111800 Sobic007G111800 Sobic009G095800--Sobic007G111800 Sobic007G212000 Sobic007G212000 Sobic009G095800--Sobic007G212000 Sobic009G095800--Sobic003G007400 Sobic005G216600 Sobic005G216600 Sobic009G095800--Sobic005G216600 Sobic001G293100 Sobic001G293100 Sobic009G095800--Sobic001G293100 Sobic003G161400 Sobic003G161400 Sobic009G095800--Sobic003G161400 Sobic003G255600 Sobic003G255600 Sobic009G095800--Sobic003G255600 Sobic003G045900--Sobic009G095800 Sobic003G045900--Sobic003G007400 Sobic003G045900--Sobic010G268700 Sobic003G045900--Sobic008G010500 Sobic003G045900--Sobic005G206000 Sobic003G045900--Sobic003G161400 Sobic001G342000 Sobic001G342000 Sobic003G045900--Sobic001G342000 Sobic006G097900 Sobic006G097900 Sobic003G045900--Sobic006G097900 Sobic003G045900--Sobic003G255600 Sobic001G301000 Sobic001G301000 Sobic008G010500--Sobic001G301000 Sobic008G010500--Sobic001G231800 Sobic008G010500--Sobic004G121600 Sobic008G010500--Sobic010G268700 Sobic005G119900 Sobic005G119900 Sobic008G010500--Sobic005G119900 Sobic008G010500--Sobic005G206000 Sobic003G441700 Sobic003G441700 Sobic008G010500--Sobic003G441700 Sobic010G245400 Sobic010G245400 Sobic008G010500--Sobic010G245400 Sobic008G010500--Sobic003G053200 Sobic001G506800 Sobic001G506800 Sobic003G007400--Sobic001G506800 Sobic003G007400--Sobic004G121600 Sobic003G007400--Sobic009G095800 Sobic007G186500 Sobic007G186500 Sobic003G007400--Sobic007G186500 Sobic003G007400--Sobic001G342000 Sobic003G007400--Sobic008G010500 Sobic008G164450 Sobic008G164450 Sobic003G007400--Sobic008G164450 Sobic003G007400--Sobic010G214300 Sobic003G007400--Sobic005G216600 Sobic010G214300--Sobic001G506800 Sobic010G214300--Sobic003G007400 Sobic010G214300--Sobic001G342000 Sobic010G214300--Sobic008G010500 Sobic010G214300--Sobic007G186500 Sobic010G214300--Sobic008G164450 Sobic010G204200 Sobic010G204200 Sobic010G214300--Sobic010G204200 Sobic006G135300 Sobic006G135300 Sobic010G214300--Sobic006G135300 Sobic007G135100 Sobic007G135100 Sobic010G214300--Sobic007G135100 Sobic001G231800--Sobic001G301000 Sobic001G231800--Sobic008G010500 Sobic001G231800--Sobic010G245400 Sobic001G231800--Sobic005G119900 Sobic001G231800--Sobic003G441700 Sobic001G231800--Sobic004G121600 Sobic001G231800--Sobic003G053200 Sobic001G231800--Sobic010G268700 Sobic003G357700 Sobic003G357700 Sobic001G231800--Sobic003G357700 Sobic005G206000--Sobic001G301000 Sobic005G206000--Sobic010G268700 Sobic005G206000--Sobic008G010500 Sobic005G206000--Sobic001G231800 Sobic005G177100 Sobic005G177100 Sobic005G206000--Sobic005G177100 Sobic005G206000--Sobic010G245400 Sobic005G206000--Sobic006G097900 Sobic003G053600 Sobic003G053600 Sobic005G206000--Sobic003G053600 Sobic004G002901 Sobic004G002901 Sobic005G206000--Sobic004G002901
Octagon: transcription factors


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