Gene annotation
Transcriptome id Sobic.003G152000.1
Synonym Sb03g013200
Functional annotation peroxidase precursor, putative, expressed
UniProt C5XIY0
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF74
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT5G05340 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os01g22336.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a050571 , Zm00025a050572 , Zm00025a048928 , Zm00025a036133 , Zm00025a042786 , Zm00025a038143 , Zm00025a044843 , Zm00025a024382 , Zm00025a024385
Brachypodium KQK04186 , KQK04187 , KQK04188 , KQK14347 , KQK07348 , KQK18502 , KQK04038 , PNT70450 , KQK18803 , KQK18804
Barley HORVU3Hr1G027850.7 , HORVU6Hr1G075510.2 , HORVU6Hr1G075510.1 , HORVU7Hr1G045600.1 , HORVU7Hr1G039560.1 , HORVU1Hr1G016660.1 , HORVU1Hr1G016660.2 , HORVU1Hr1G016660.3 , HORVU7Hr1G039580.1 , HORVU7Hr1G039570.6 , HORVU5Hr1G012920.1 , HORVU7Hr1G039590.1 , HORVU7Hr1G108530.2 , HORVU7Hr1G108530.1 , HORVU7Hr1G083550.6 , HORVU7Hr1G083550.7 , HORVU7Hr1G083550.4 , HORVU7Hr1G083550.5 , HORVU7Hr1G083550.2 , HORVU7Hr1G083550.3 , HORVU7Hr1G083550.1 , HORVU7Hr1G020300.8 , HORVU7Hr1G020300.9 , HORVU7Hr1G020300.3 , HORVU7Hr1G020300.4 , HORVU7Hr1G020300.5 , HORVU3Hr1G027850.1 , HORVU3Hr1G027850.5 , HORVU3Hr1G027850.6 , HORVU7Hr1G020300.10 , HORVU7Hr1G020300.1 , HORVU3Hr1G027850.9 , HORVU3Hr1G027850.8 , HORVU3Hr1G027850.3 , HORVU3Hr1G027850.4
Wheat TraesCS7D02G195100 , TraesCS7B02G099600 , TraesCS1B02G365300 , TraesCS6B02G333800 , TraesCS7A02G193900 , TraesCS3A02G297300 , TraesCS2D02G511200 , TraesCS7B02G099200 , TraesCS7A02G339600 , TraesCS2B02G537700 , TraesCS7D02G195000 , TraesCS2D02G509700 , TraesCS7D02G347300 , TraesCS7B02G099100 , TraesCS4A02G389000 , TraesCS7D02G195500 , TraesCS7B02G379100 , TraesCS7A02G194200 , TraesCS2A02G509800 , TraesCS1D02G079800 , TraesCS7B02G251100 , TraesCS3A02G141800 , TraesCS1B02G095800 , TraesCS7D02G223900 , TraesCS7D02G195200 , TraesCS6D02G284700 , TraesCS7D02G084900 , TraesCS3D02G145400 , TraesCS7D02G195400 , TraesCS1D02G080400 , TraesCS7A02G193800 , TraesCS1A02G077700 , TraesCS1A02G077700 , TraesCS3B02G162900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
2 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -
4 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
5 Sobic.003G319400 receptor protein kinase, putative, expressed -
6 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
7 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
8 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
9 Sobic.004G121600 expansin precursor, putative, expressed -
10 Sobic.010G031700 thaumatin, putative, expressed -
11 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
13 Sobic.001G522200 - -
14 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.009G065700 - -
17 Sobic.006G130400 TGF-beta receptor, type I/II extracellular region, putative, expressed -
18 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
19 Sobic.008G020000 - -
20 Sobic.003G441601 - -


Gene co-expression network
sample Sobic003G152000 Sobic003G152000 Sobic003G441800 Sobic003G441800 Sobic003G152000--Sobic003G441800 Sobic003G053200 Sobic003G053200 Sobic003G152000--Sobic003G053200 Sobic009G181600 Sobic009G181600 Sobic003G152000--Sobic009G181600 Sobic004G029400 Sobic004G029400 Sobic003G152000--Sobic004G029400 Sobic003G319400 Sobic003G319400 Sobic003G152000--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic003G152000--Sobic005G202300 Sobic006G205700 Sobic006G205700 Sobic003G152000--Sobic006G205700 Sobic007G037600 Sobic007G037600 Sobic003G152000--Sobic007G037600 Sobic004G121600 Sobic004G121600 Sobic003G152000--Sobic004G121600 Sobic003G441800--Sobic003G053200 Sobic003G441700 Sobic003G441700 Sobic003G441800--Sobic003G441700 Sobic003G441601 Sobic003G441601 Sobic003G441800--Sobic003G441601 Sobic005G046400 Sobic005G046400 Sobic003G441800--Sobic005G046400 Sobic003G441800--Sobic006G205700 Sobic003G441800--Sobic004G121600 Sobic005G119900 Sobic005G119900 Sobic003G441800--Sobic005G119900 Sobic003G441800--Sobic007G037600 Sobic009G065700 Sobic009G065700 Sobic003G441800--Sobic009G065700 Sobic003G053200--Sobic003G441800 Sobic003G053200--Sobic003G441700 Sobic001G301000 Sobic001G301000 Sobic003G053200--Sobic001G301000 Sobic003G053200--Sobic004G121600 Sobic010G031700 Sobic010G031700 Sobic003G053200--Sobic010G031700 Sobic003G053200--Sobic005G119900 Sobic003G053200--Sobic004G029400 Sobic001G231800 Sobic001G231800 Sobic003G053200--Sobic001G231800 Sobic003G053200--Sobic007G037600 Sobic006G106900 Sobic006G106900 Sobic009G181600--Sobic006G106900 Sobic009G181600--Sobic003G319400 Sobic009G181600--Sobic005G202300 Sobic006G092700 Sobic006G092700 Sobic009G181600--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic009G181600--Sobic008G164450 Sobic002G343100 Sobic002G343100 Sobic009G181600--Sobic002G343100 Sobic009G181600--Sobic004G029400 Sobic009G181600--Sobic007G037600 Sobic009G181600--Sobic010G031700 Sobic004G029400--Sobic003G441800 Sobic004G029400--Sobic003G053200 Sobic004G029400--Sobic010G031700 Sobic004G029400--Sobic004G121600 Sobic004G029400--Sobic007G037600 Sobic001G539200 Sobic001G539200 Sobic004G029400--Sobic001G539200 Sobic004G029400--Sobic009G181600 Sobic003G282300 Sobic003G282300 Sobic004G029400--Sobic003G282300 Sobic004G029400--Sobic005G119900 Sobic003G319400--Sobic006G106900 Sobic003G319400--Sobic005G202300 Sobic004G306900 Sobic004G306900 Sobic003G319400--Sobic004G306900 Sobic001G438200 Sobic001G438200 Sobic003G319400--Sobic001G438200 Sobic003G319400--Sobic009G181600 Sobic007G086300 Sobic007G086300 Sobic003G319400--Sobic007G086300 Sobic003G282200 Sobic003G282200 Sobic003G319400--Sobic003G282200 Sobic003G064800 Sobic003G064800 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000 Sobic005G202300--Sobic006G106900 Sobic005G202300--Sobic003G319400 Sobic005G202300--Sobic003G280000 Sobic005G202300--Sobic009G181600 Sobic005G202300--Sobic003G053200 Sobic005G202300--Sobic010G031700 Sobic003G353200 Sobic003G353200 Sobic005G202300--Sobic003G353200 Sobic005G202300--Sobic004G029400 Sobic001G058300 Sobic001G058300 Sobic005G202300--Sobic001G058300 Sobic002G391400 Sobic002G391400 Sobic006G205700--Sobic002G391400 Sobic006G205700--Sobic003G441800 Sobic004G106100 Sobic004G106100 Sobic006G205700--Sobic004G106100 Sobic003G167300 Sobic003G167300 Sobic006G205700--Sobic003G167300 Sobic010G241900 Sobic010G241900 Sobic006G205700--Sobic010G241900 Sobic006G205700--Sobic005G046400 Sobic007G206800 Sobic007G206800 Sobic006G205700--Sobic007G206800 Sobic006G205700--Sobic003G441601 Sobic003G095100 Sobic003G095100 Sobic006G205700--Sobic003G095100 Sobic007G037600--Sobic003G441800 Sobic007G037600--Sobic003G353200 Sobic007G037600--Sobic010G031700 Sobic002G146000 Sobic002G146000 Sobic007G037600--Sobic002G146000 Sobic007G037600--Sobic003G053200 Sobic007G037600--Sobic004G029400 Sobic001G181600 Sobic001G181600 Sobic007G037600--Sobic001G181600 Sobic007G037600--Sobic001G301000 Sobic007G037600--Sobic006G205700 Sobic004G121600--Sobic003G441700 Sobic004G121600--Sobic001G301000 Sobic006G097900 Sobic006G097900 Sobic004G121600--Sobic006G097900 Sobic004G121600--Sobic005G119900 Sobic004G121600--Sobic003G053200 Sobic004G121600--Sobic003G441800 Sobic008G010500 Sobic008G010500 Sobic004G121600--Sobic008G010500 Sobic001G218400 Sobic001G218400 Sobic004G121600--Sobic001G218400 Sobic004G121800 Sobic004G121800 Sobic004G121600--Sobic004G121800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.