Gene annotation
Transcriptome id Sobic.006G120000.1
Synonym Sb06g020070
Functional annotation BTBN11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
UniProt C5YAQ3
Pfam PF03000
Panther DB PTHR32370 PTHR32370:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67900 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os04g40100.1 : BTBN11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
MaizeGDB (Corn) Zm00025a010992
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
2 Sobic.007G121000 YDG/SRA domain containing protein, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
3 Sobic.009G190400 expressed protein -
4 Sobic.010G023500 von Willebrand factor type A domain containing protein, putative, expressed -
5 Sobic.006G155200 TGF-beta receptor, type I/II extracellular region, putative, expressed -
6 Sobic.004G156600 - -
7 Sobic.008G020500 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
8 Sobic.001G157900 PLA IIIA/PLP7, putative, expressed -
9 Sobic.002G282100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
10 Sobic.004G198200 expressed protein -
11 Sobic.002G299800 expressed protein -
12 Sobic.004G287500 expressed protein -
13 Sobic.007G076800 B3 DNA binding domain containing protein, expressed -
14 Sobic.003G415500 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
15 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
16 Sobic.001G494300 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
17 Sobic.009G163700 fasciclin-like arabinogalactan protein, putative, expressed -
18 Sobic.005G082100 pectinesterase, putative, expressed -
19 Sobic.007G208500 expressed protein -
20 Sobic.006G108000 formin, putative, expressed -


Gene co-expression network
sample Sobic006G120000 Sobic006G120000 Sobic003G040100 Sobic003G040100 Sobic006G120000--Sobic003G040100 Sobic007G121000 Sobic007G121000 Sobic006G120000--Sobic007G121000 Sobic009G190400 Sobic009G190400 Sobic006G120000--Sobic009G190400 Sobic010G023500 Sobic010G023500 Sobic006G120000--Sobic010G023500 Sobic006G155200 Sobic006G155200 Sobic006G120000--Sobic006G155200 Sobic004G156600 Sobic004G156600 Sobic006G120000--Sobic004G156600 Sobic008G020500 Sobic008G020500 Sobic006G120000--Sobic008G020500 Sobic001G157900 Sobic001G157900 Sobic006G120000--Sobic001G157900 Sobic002G282100 Sobic002G282100 Sobic006G120000--Sobic002G282100 Sobic003G040100--Sobic009G190400 Sobic003G040100--Sobic008G020500 Sobic006G155900 Sobic006G155900 Sobic003G040100--Sobic006G155900 Sobic004G198200 Sobic004G198200 Sobic003G040100--Sobic004G198200 Sobic003G040100--Sobic004G156600 Sobic001G494300 Sobic001G494300 Sobic003G040100--Sobic001G494300 Sobic003G390300 Sobic003G390300 Sobic003G040100--Sobic003G390300 Sobic003G415500 Sobic003G415500 Sobic003G040100--Sobic003G415500 Sobic004G061600 Sobic004G061600 Sobic003G040100--Sobic004G061600 Sobic002G258000 Sobic002G258000 Sobic007G121000--Sobic002G258000 Sobic001G137500 Sobic001G137500 Sobic007G121000--Sobic001G137500 Sobic001G419500 Sobic001G419500 Sobic007G121000--Sobic001G419500 Sobic003G091300 Sobic003G091300 Sobic007G121000--Sobic003G091300 Sobic004G024400 Sobic004G024400 Sobic007G121000--Sobic004G024400 Sobic002G178700 Sobic002G178700 Sobic007G121000--Sobic002G178700 Sobic003G006000 Sobic003G006000 Sobic007G121000--Sobic003G006000 Sobic001G288000 Sobic001G288000 Sobic007G121000--Sobic001G288000 Sobic001G457600 Sobic001G457600 Sobic007G121000--Sobic001G457600 Sobic009G190400--Sobic003G040100 Sobic009G190400--Sobic006G155900 Sobic009G190400--Sobic004G198200 Sobic009G064600 Sobic009G064600 Sobic009G190400--Sobic009G064600 Sobic009G190400--Sobic003G415500 Sobic009G190400--Sobic008G020500 Sobic009G190400--Sobic002G282100 Sobic009G190400--Sobic004G156600 Sobic001G070200 Sobic001G070200 Sobic009G190400--Sobic001G070200 Sobic001G183200 Sobic001G183200 Sobic010G023500--Sobic001G183200 Sobic002G096400 Sobic002G096400 Sobic010G023500--Sobic002G096400 Sobic008G181600 Sobic008G181600 Sobic010G023500--Sobic008G181600 Sobic001G345600 Sobic001G345600 Sobic010G023500--Sobic001G345600 Sobic001G312200 Sobic001G312200 Sobic010G023500--Sobic001G312200 Sobic005G152400 Sobic005G152400 Sobic010G023500--Sobic005G152400 Sobic005G064300 Sobic005G064300 Sobic010G023500--Sobic005G064300 Sobic001G200800 Sobic001G200800 Sobic010G023500--Sobic001G200800 Sobic001G345700 Sobic001G345700 Sobic010G023500--Sobic001G345700 Sobic001G397900 Sobic001G397900 Sobic006G155200--Sobic001G397900 Sobic007G139000 Sobic007G139000 Sobic006G155200--Sobic007G139000 Sobic005G102200 Sobic005G102200 Sobic006G155200--Sobic005G102200 Sobic002G285525 Sobic002G285525 Sobic006G155200--Sobic002G285525 Sobic003G191800 Sobic003G191800 Sobic006G155200--Sobic003G191800 Sobic002G101800 Sobic002G101800 Sobic006G155200--Sobic002G101800 Sobic002G344100 Sobic002G344100 Sobic006G155200--Sobic002G344100 Sobic003G111600 Sobic003G111600 Sobic006G155200--Sobic003G111600 Sobic001G137200 Sobic001G137200 Sobic006G155200--Sobic001G137200 Sobic004G156600--Sobic003G390300 Sobic002G299800 Sobic002G299800 Sobic004G156600--Sobic002G299800 Sobic006G186200 Sobic006G186200 Sobic004G156600--Sobic006G186200 Sobic004G156600--Sobic004G061600 Sobic004G107400 Sobic004G107400 Sobic004G156600--Sobic004G107400 Sobic008G136900 Sobic008G136900 Sobic004G156600--Sobic008G136900 Sobic001G062700 Sobic001G062700 Sobic004G156600--Sobic001G062700 Sobic004G156600--Sobic003G040100 Sobic007G076800 Sobic007G076800 Sobic004G156600--Sobic007G076800 Sobic008G020500--Sobic004G198200 Sobic008G020500--Sobic003G040100 Sobic008G020500--Sobic006G155900 Sobic008G020500--Sobic001G494300 Sobic008G020500--Sobic009G190400 Sobic007G130000 Sobic007G130000 Sobic008G020500--Sobic007G130000 Sobic008G020500--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic008G020500--Sobic001G331100 Sobic008G020500--Sobic004G156600 Sobic003G031500 Sobic003G031500 Sobic001G157900--Sobic003G031500 Sobic001G157900--Sobic006G120000 Sobic005G038000 Sobic005G038000 Sobic001G157900--Sobic005G038000 Sobic005G070800 Sobic005G070800 Sobic001G157900--Sobic005G070800 Sobic001G009100 Sobic001G009100 Sobic001G157900--Sobic001G009100 Sobic001G515800 Sobic001G515800 Sobic001G157900--Sobic001G515800 Sobic006G163200 Sobic006G163200 Sobic001G157900--Sobic006G163200 Sobic010G246400 Sobic010G246400 Sobic001G157900--Sobic010G246400 Sobic003G015950 Sobic003G015950 Sobic001G157900--Sobic003G015950 Sobic002G282100--Sobic009G190400 Sobic002G282100--Sobic003G040100 Sobic002G282100--Sobic004G061600 Sobic002G282100--Sobic001G062700 Sobic002G282100--Sobic004G156600 Sobic002G282100--Sobic006G155900 Sobic005G168500 Sobic005G168500 Sobic002G282100--Sobic005G168500 Sobic002G282100--Sobic007G076800 Sobic002G282100--Sobic003G390300
Octagon: transcription factors


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