Gene annotation
Transcriptome id Sobic.004G287500.2,Sobic.004G287500.4,Sobic.004G287500.3
Synonym Sb04g032310
Functional annotation expressed protein
UniProt A0A1Z5RQ36 , A0A1Z5RPP0
Pfam PF03168
Panther DB PTHR31852 PTHR31852:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42860 : -
RAP-DB (Rice) LOC_Os02g44740.1,LOC_Os02g44740.2 : expressed protein
MaizeGDB (Corn) Zm00025a021453
Brachypodium KQK00702
Barley HORVU6Hr1G064440.2 , HORVU6Hr1G064440.1
Wheat TraesCS6D02G233900 , TraesCS6B02G272400 , TraesCS6A02G252400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G163800 expressed protein -
2 Sobic.001G180300 expressed protein -
3 Sobic.006G108000 formin, putative, expressed -
4 Sobic.004G236500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
5 Sobic.006G187600 DUF623 domain containing protein, expressed -
6 Sobic.010G068300 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
7 Sobic.008G031600 expressed protein -
8 Sobic.002G284701 - -
9 Sobic.001G422800 aspartic proteinase nepenthesin precursor, putative, expressed -
10 Sobic.005G022600 PME/invertase inhibitor, putative, expressed -
11 Sobic.004G227000 expressed protein -
12 Sobic.003G217000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G103400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
14 Sobic.001G084500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
15 Sobic.009G053201 - -
16 Sobic.010G029200 OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
17 Sobic.008G088863 - -
18 Sobic.001G145300 - -
19 Sobic.010G045300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G299800 expressed protein -


Gene co-expression network
sample Sobic004G287500 Sobic004G287500 Sobic008G163800 Sobic008G163800 Sobic004G287500--Sobic008G163800 Sobic001G180300 Sobic001G180300 Sobic004G287500--Sobic001G180300 Sobic006G108000 Sobic006G108000 Sobic004G287500--Sobic006G108000 Sobic004G236500 Sobic004G236500 Sobic004G287500--Sobic004G236500 Sobic006G187600 Sobic006G187600 Sobic004G287500--Sobic006G187600 Sobic010G068300 Sobic010G068300 Sobic004G287500--Sobic010G068300 Sobic008G031600 Sobic008G031600 Sobic004G287500--Sobic008G031600 Sobic002G284701 Sobic002G284701 Sobic004G287500--Sobic002G284701 Sobic001G422800 Sobic001G422800 Sobic004G287500--Sobic001G422800 Sobic008G163800--Sobic008G031600 Sobic001G103400 Sobic001G103400 Sobic008G163800--Sobic001G103400 Sobic010G014900 Sobic010G014900 Sobic008G163800--Sobic010G014900 Sobic001G460700 Sobic001G460700 Sobic008G163800--Sobic001G460700 Sobic007G158400 Sobic007G158400 Sobic008G163800--Sobic007G158400 Sobic004G061600 Sobic004G061600 Sobic008G163800--Sobic004G061600 Sobic003G390300 Sobic003G390300 Sobic008G163800--Sobic003G390300 Sobic004G107400 Sobic004G107400 Sobic008G163800--Sobic004G107400 Sobic010G029200 Sobic010G029200 Sobic008G163800--Sobic010G029200 Sobic001G180300--Sobic006G187600 Sobic004G227000 Sobic004G227000 Sobic001G180300--Sobic004G227000 Sobic006G278400 Sobic006G278400 Sobic001G180300--Sobic006G278400 Sobic010G014200 Sobic010G014200 Sobic001G180300--Sobic010G014200 Sobic003G092200 Sobic003G092200 Sobic001G180300--Sobic003G092200 Sobic002G425900 Sobic002G425900 Sobic001G180300--Sobic002G425900 Sobic008G163600 Sobic008G163600 Sobic001G180300--Sobic008G163600 Sobic004G329100 Sobic004G329100 Sobic001G180300--Sobic004G329100 Sobic010G178900 Sobic010G178900 Sobic001G180300--Sobic010G178900 Sobic003G406500 Sobic003G406500 Sobic006G108000--Sobic003G406500 Sobic001G331100 Sobic001G331100 Sobic006G108000--Sobic001G331100 Sobic004G115600 Sobic004G115600 Sobic006G108000--Sobic004G115600 Sobic006G108000--Sobic008G163800 Sobic006G245200 Sobic006G245200 Sobic006G108000--Sobic006G245200 Sobic002G221400 Sobic002G221400 Sobic006G108000--Sobic002G221400 Sobic009G254400 Sobic009G254400 Sobic006G108000--Sobic009G254400 Sobic003G040100 Sobic003G040100 Sobic006G108000--Sobic003G040100 Sobic007G153300 Sobic007G153300 Sobic006G108000--Sobic007G153300 Sobic006G257500 Sobic006G257500 Sobic004G236500--Sobic006G257500 Sobic008G020300 Sobic008G020300 Sobic004G236500--Sobic008G020300 Sobic003G008850 Sobic003G008850 Sobic004G236500--Sobic003G008850 Sobic010G155901 Sobic010G155901 Sobic004G236500--Sobic010G155901 Sobic001G145300 Sobic001G145300 Sobic004G236500--Sobic001G145300 Sobic010G132300 Sobic010G132300 Sobic004G236500--Sobic010G132300 Sobic006G094400 Sobic006G094400 Sobic004G236500--Sobic006G094400 Sobic001G407000 Sobic001G407000 Sobic004G236500--Sobic001G407000 Sobic004G236500--Sobic002G284701 Sobic006G187600--Sobic001G180300 Sobic006G187600--Sobic004G227000 Sobic006G187600--Sobic002G425900 Sobic006G187600--Sobic003G092200 Sobic006G187600--Sobic010G178900 Sobic010G224800 Sobic010G224800 Sobic006G187600--Sobic010G224800 Sobic004G197300 Sobic004G197300 Sobic006G187600--Sobic004G197300 Sobic010G114400 Sobic010G114400 Sobic006G187600--Sobic010G114400 Sobic001G441800 Sobic001G441800 Sobic006G187600--Sobic001G441800 Sobic010G068300--Sobic010G029200 Sobic010G045300 Sobic010G045300 Sobic010G068300--Sobic010G045300 Sobic010G208300 Sobic010G208300 Sobic010G068300--Sobic010G208300 Sobic009G039400 Sobic009G039400 Sobic010G068300--Sobic009G039400 Sobic003G081400 Sobic003G081400 Sobic010G068300--Sobic003G081400 Sobic005G022600 Sobic005G022600 Sobic010G068300--Sobic005G022600 Sobic003G142900 Sobic003G142900 Sobic010G068300--Sobic003G142900 Sobic004G069600 Sobic004G069600 Sobic010G068300--Sobic004G069600 Sobic006G133650 Sobic006G133650 Sobic010G068300--Sobic006G133650 Sobic008G031600--Sobic003G081400 Sobic003G201400 Sobic003G201400 Sobic008G031600--Sobic003G201400 Sobic008G031600--Sobic010G045300 Sobic008G031600--Sobic010G029200 Sobic010G122533 Sobic010G122533 Sobic008G031600--Sobic010G122533 Sobic008G031600--Sobic009G039400 Sobic008G031600--Sobic010G208300 Sobic008G031600--Sobic005G022600 Sobic006G167200 Sobic006G167200 Sobic008G031600--Sobic006G167200 Sobic002G284701--Sobic001G145300 Sobic003G119266 Sobic003G119266 Sobic002G284701--Sobic003G119266 Sobic004G279150 Sobic004G279150 Sobic002G284701--Sobic004G279150 Sobic004G160950 Sobic004G160950 Sobic002G284701--Sobic004G160950 Sobic003G279600 Sobic003G279600 Sobic002G284701--Sobic003G279600 Sobic009G053201 Sobic009G053201 Sobic002G284701--Sobic009G053201 Sobic002G284701--Sobic010G132300 Sobic002G284701--Sobic010G045300 Sobic002G188100 Sobic002G188100 Sobic002G284701--Sobic002G188100 Sobic008G088863 Sobic008G088863 Sobic001G422800--Sobic008G088863 Sobic001G084500 Sobic001G084500 Sobic001G422800--Sobic001G084500 Sobic001G422800--Sobic001G145300 Sobic001G422800--Sobic004G279150 Sobic009G127600 Sobic009G127600 Sobic001G422800--Sobic009G127600 Sobic001G261440 Sobic001G261440 Sobic001G422800--Sobic001G261440 Sobic006G172651 Sobic006G172651 Sobic001G422800--Sobic006G172651 Sobic001G422800--Sobic006G167200 Sobic001G422800--Sobic002G188100
Octagon: transcription factors


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