Gene annotation
Transcriptome id Sobic.008G020500.1
Synonym CDC45, Sb08g001810
Functional annotation CDC45B - Putative DNA replication initiation protein, expressed
UniProt C5YQR9
Pfam PF02724
Panther DB PTHR10507 PTHR10507:SF0
NCBI CDD -
KEGG Orthology K06628; cell division control protein 45
Gene Ontology GO:0006270; DNA replication initiation


Orthologs (automatic annotation)
TAIR AT3G25100 : cell division cycle 45
RAP-DB (Rice) LOC_Os11g03430.1 : CDC45B - Putative DNA replication initiation protein, expressed
MaizeGDB (Corn) Zm00025a053741
Brachypodium KQJ92482
Barley HORVU4Hr1G023520.1 , HORVU5Hr1G045560.1 , HORVU5Hr1G045530.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G198200 expressed protein -
2 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
3 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
4 Sobic.001G494300 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
5 Sobic.009G190400 expressed protein -
6 Sobic.007G130000 STE_MEKK_ste11_MAP3K.21 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.001G070200 - -
8 Sobic.001G331100 expressed protein -
9 Sobic.004G156600 - -
10 Sobic.003G390300 expressed protein -
11 Sobic.003G415500 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
12 Sobic.010G209800 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
13 Sobic.001G427400 AAA-type ATPase family protein, putative, expressed K11269: CTF18, chromosome transmission fidelity protein 18
14 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
15 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
16 Sobic.003G047200 expressed protein -
17 Sobic.003G148500 endoglucanase, putative, expressed -
18 Sobic.009G203200 pectinesterase, putative, expressed K01051: pectinesterase
19 Sobic.009G163700 fasciclin-like arabinogalactan protein, putative, expressed -
20 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -


Gene co-expression network
sample Sobic008G020500 Sobic008G020500 Sobic004G198200 Sobic004G198200 Sobic008G020500--Sobic004G198200 Sobic003G040100 Sobic003G040100 Sobic008G020500--Sobic003G040100 Sobic006G155900 Sobic006G155900 Sobic008G020500--Sobic006G155900 Sobic001G494300 Sobic001G494300 Sobic008G020500--Sobic001G494300 Sobic009G190400 Sobic009G190400 Sobic008G020500--Sobic009G190400 Sobic007G130000 Sobic007G130000 Sobic008G020500--Sobic007G130000 Sobic001G070200 Sobic001G070200 Sobic008G020500--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic008G020500--Sobic001G331100 Sobic004G156600 Sobic004G156600 Sobic008G020500--Sobic004G156600 Sobic004G198200--Sobic008G020500 Sobic004G198200--Sobic006G155900 Sobic004G198200--Sobic009G190400 Sobic004G198200--Sobic003G040100 Sobic004G198200--Sobic001G070200 Sobic004G198200--Sobic007G130000 Sobic004G198200--Sobic001G494300 Sobic003G414400 Sobic003G414400 Sobic004G198200--Sobic003G414400 Sobic001G427400 Sobic001G427400 Sobic004G198200--Sobic001G427400 Sobic003G040100--Sobic009G190400 Sobic003G040100--Sobic008G020500 Sobic003G040100--Sobic006G155900 Sobic003G040100--Sobic004G198200 Sobic003G040100--Sobic004G156600 Sobic003G040100--Sobic001G494300 Sobic003G390300 Sobic003G390300 Sobic003G040100--Sobic003G390300 Sobic003G415500 Sobic003G415500 Sobic003G040100--Sobic003G415500 Sobic004G061600 Sobic004G061600 Sobic003G040100--Sobic004G061600 Sobic006G155900--Sobic009G190400 Sobic006G155900--Sobic004G198200 Sobic006G155900--Sobic003G040100 Sobic006G155900--Sobic001G494300 Sobic006G155900--Sobic008G020500 Sobic003G047200 Sobic003G047200 Sobic006G155900--Sobic003G047200 Sobic006G155900--Sobic003G414400 Sobic006G155900--Sobic001G070200 Sobic006G155900--Sobic001G331100 Sobic001G494300--Sobic006G155900 Sobic001G494300--Sobic008G020500 Sobic001G494300--Sobic004G198200 Sobic001G494300--Sobic003G040100 Sobic007G019600 Sobic007G019600 Sobic001G494300--Sobic007G019600 Sobic001G494300--Sobic001G427400 Sobic001G494300--Sobic003G047200 Sobic009G163700 Sobic009G163700 Sobic001G494300--Sobic009G163700 Sobic001G494300--Sobic007G130000 Sobic009G190400--Sobic003G040100 Sobic009G190400--Sobic006G155900 Sobic009G190400--Sobic004G198200 Sobic009G064600 Sobic009G064600 Sobic009G190400--Sobic009G064600 Sobic009G190400--Sobic003G415500 Sobic009G190400--Sobic008G020500 Sobic002G282100 Sobic002G282100 Sobic009G190400--Sobic002G282100 Sobic009G190400--Sobic004G156600 Sobic009G190400--Sobic001G070200 Sobic007G130000--Sobic004G198200 Sobic007G130000--Sobic001G427400 Sobic007G130000--Sobic008G020500 Sobic005G056800 Sobic005G056800 Sobic007G130000--Sobic005G056800 Sobic007G130000--Sobic001G494300 Sobic007G130000--Sobic006G155900 Sobic007G130000--Sobic003G040100 Sobic002G380700 Sobic002G380700 Sobic007G130000--Sobic002G380700 Sobic001G284900 Sobic001G284900 Sobic007G130000--Sobic001G284900 Sobic001G070200--Sobic004G198200 Sobic001G070200--Sobic006G155900 Sobic001G070200--Sobic003G414400 Sobic006G176400 Sobic006G176400 Sobic001G070200--Sobic006G176400 Sobic009G081400 Sobic009G081400 Sobic001G070200--Sobic009G081400 Sobic010G215300 Sobic010G215300 Sobic001G070200--Sobic010G215300 Sobic004G133000 Sobic004G133000 Sobic001G070200--Sobic004G133000 Sobic001G070200--Sobic008G020500 Sobic001G070200--Sobic009G190400 Sobic004G115600 Sobic004G115600 Sobic001G331100--Sobic004G115600 Sobic006G108000 Sobic006G108000 Sobic001G331100--Sobic006G108000 Sobic002G279300 Sobic002G279300 Sobic001G331100--Sobic002G279300 Sobic009G254400 Sobic009G254400 Sobic001G331100--Sobic009G254400 Sobic001G331100--Sobic006G155900 Sobic008G163800 Sobic008G163800 Sobic001G331100--Sobic008G163800 Sobic003G406500 Sobic003G406500 Sobic001G331100--Sobic003G406500 Sobic001G331100--Sobic003G040100 Sobic001G263500 Sobic001G263500 Sobic001G331100--Sobic001G263500 Sobic004G156600--Sobic003G390300 Sobic002G299800 Sobic002G299800 Sobic004G156600--Sobic002G299800 Sobic006G186200 Sobic006G186200 Sobic004G156600--Sobic006G186200 Sobic004G156600--Sobic004G061600 Sobic004G107400 Sobic004G107400 Sobic004G156600--Sobic004G107400 Sobic008G136900 Sobic008G136900 Sobic004G156600--Sobic008G136900 Sobic001G062700 Sobic001G062700 Sobic004G156600--Sobic001G062700 Sobic004G156600--Sobic003G040100 Sobic007G076800 Sobic007G076800 Sobic004G156600--Sobic007G076800
Octagon: transcription factors


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