Gene annotation
Transcriptome id Sobic.007G121000.1
Synonym
Functional annotation YDG/SRA domain containing protein, expressed
UniProt A0A1B6PHF0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g30910.1 : YDG/SRA domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G258000 homologous to AGL2 and AGL4: expression analysis and mapping data suggest that it is the ortholog of OsMADS24.(PubMedID : 9065695)@OsMADS8 - MADS-box family gene with MIKCc type-box, expressed -
2 Sobic.001G137500 ankyrin, putative, expressed -
3 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
4 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
5 Sobic.004G024400 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
6 Sobic.002G178700 ubiquitin fusion protein, putative, expressed -
7 Sobic.003G006000 expressed protein -
8 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
9 Sobic.001G457600 piwi domain containing protein, expressed -
10 Sobic.010G111750 - -
11 Sobic.007G193300 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed -
12 Sobic.001G137400 ankyrin, putative, expressed -
13 Sobic.002G078900 agenet domain containing protein, expressed -
14 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
15 Sobic.003G088600 transcription factor X1, putative, expressed -
16 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
17 Sobic.006G120000 BTBN11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
18 Sobic.005G213300 expressed protein -
19 Sobic.008G137700 XH domain containing protein, expressed -
20 Sobic.010G194600 CW-type Zinc Finger, putative, expressed -


Gene co-expression network
sample Sobic007G121000 Sobic007G121000 Sobic002G258000 Sobic002G258000 Sobic007G121000--Sobic002G258000 Sobic001G137500 Sobic001G137500 Sobic007G121000--Sobic001G137500 Sobic001G419500 Sobic001G419500 Sobic007G121000--Sobic001G419500 Sobic003G091300 Sobic003G091300 Sobic007G121000--Sobic003G091300 Sobic004G024400 Sobic004G024400 Sobic007G121000--Sobic004G024400 Sobic002G178700 Sobic002G178700 Sobic007G121000--Sobic002G178700 Sobic003G006000 Sobic003G006000 Sobic007G121000--Sobic003G006000 Sobic001G288000 Sobic001G288000 Sobic007G121000--Sobic001G288000 Sobic001G457600 Sobic001G457600 Sobic007G121000--Sobic001G457600 Sobic002G258000--Sobic001G137500 Sobic002G258000--Sobic001G457600 Sobic002G258000--Sobic001G419500 Sobic001G137400 Sobic001G137400 Sobic002G258000--Sobic001G137400 Sobic002G258000--Sobic003G006000 Sobic009G243000 Sobic009G243000 Sobic002G258000--Sobic009G243000 Sobic007G193300 Sobic007G193300 Sobic002G258000--Sobic007G193300 Sobic010G194600 Sobic010G194600 Sobic002G258000--Sobic010G194600 Sobic002G258000--Sobic002G178700 Sobic001G137500--Sobic001G419500 Sobic001G137500--Sobic002G258000 Sobic001G137500--Sobic001G457600 Sobic001G137500--Sobic002G178700 Sobic001G137500--Sobic003G006000 Sobic001G137500--Sobic007G193300 Sobic001G137500--Sobic001G137400 Sobic001G137500--Sobic010G194600 Sobic003G088600 Sobic003G088600 Sobic001G137500--Sobic003G088600 Sobic001G419500--Sobic002G178700 Sobic001G419500--Sobic001G137500 Sobic001G216400 Sobic001G216400 Sobic001G419500--Sobic001G216400 Sobic001G419500--Sobic003G006000 Sobic001G419500--Sobic001G457600 Sobic009G063700 Sobic009G063700 Sobic001G419500--Sobic009G063700 Sobic001G419500--Sobic002G258000 Sobic001G419500--Sobic010G194600 Sobic009G075500 Sobic009G075500 Sobic001G419500--Sobic009G075500 Sobic010G111750 Sobic010G111750 Sobic003G091300--Sobic010G111750 Sobic003G091300--Sobic001G288000 Sobic003G091300--Sobic002G178700 Sobic003G091300--Sobic001G137500 Sobic003G091300--Sobic003G006000 Sobic003G091300--Sobic002G258000 Sobic003G091300--Sobic001G419500 Sobic002G205000 Sobic002G205000 Sobic003G091300--Sobic002G205000 Sobic004G031501 Sobic004G031501 Sobic003G091300--Sobic004G031501 Sobic004G024400--Sobic003G088600 Sobic008G137700 Sobic008G137700 Sobic004G024400--Sobic008G137700 Sobic006G112300 Sobic006G112300 Sobic004G024400--Sobic006G112300 Sobic006G271600 Sobic006G271600 Sobic004G024400--Sobic006G271600 Sobic004G024400--Sobic010G194600 Sobic004G024400--Sobic001G137500 Sobic004G024400--Sobic001G419500 Sobic003G300000 Sobic003G300000 Sobic004G024400--Sobic003G300000 Sobic004G024400--Sobic003G006000 Sobic002G178700--Sobic001G419500 Sobic002G178700--Sobic003G006000 Sobic002G178700--Sobic001G137500 Sobic002G178700--Sobic003G088600 Sobic002G178700--Sobic009G063700 Sobic002G078900 Sobic002G078900 Sobic002G178700--Sobic002G078900 Sobic001G459400 Sobic001G459400 Sobic002G178700--Sobic001G459400 Sobic002G178700--Sobic008G137700 Sobic002G178700--Sobic003G300000 Sobic003G006000--Sobic002G178700 Sobic003G006000--Sobic001G137500 Sobic003G006000--Sobic001G419500 Sobic003G006000--Sobic006G271600 Sobic003G006000--Sobic002G078900 Sobic003G006000--Sobic003G088600 Sobic003G006000--Sobic009G243000 Sobic003G006000--Sobic002G258000 Sobic003G006000--Sobic001G457600 Sobic001G288000--Sobic001G137400 Sobic001G288000--Sobic001G137500 Sobic001G288000--Sobic003G091300 Sobic001G288000--Sobic002G258000 Sobic001G288000--Sobic007G193300 Sobic002G299200 Sobic002G299200 Sobic001G288000--Sobic002G299200 Sobic001G288000--Sobic003G006000 Sobic001G288000--Sobic002G178700 Sobic001G288000--Sobic001G419500 Sobic001G457600--Sobic001G137500 Sobic001G457600--Sobic010G194600 Sobic001G457600--Sobic001G419500 Sobic001G457600--Sobic002G258000 Sobic007G128200 Sobic007G128200 Sobic001G457600--Sobic007G128200 Sobic004G234600 Sobic004G234600 Sobic001G457600--Sobic004G234600 Sobic001G457600--Sobic009G063700 Sobic004G281000 Sobic004G281000 Sobic001G457600--Sobic004G281000 Sobic001G457600--Sobic007G193300
Octagon: transcription factors


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