Gene annotation
Transcriptome id Sobic.008G161100.3,Sobic.008G161100.4,Sobic.008G161100.1,Sobic.008G161100.2
Synonym
Functional annotation -
UniProt A0A1Z5R706 , A0A1B6PE39
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G152600 RIO1 family protein, expressed -
2 Sobic.001G137400 ankyrin, putative, expressed -
3 Sobic.007G193300 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed -
4 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
5 Sobic.001G137500 ankyrin, putative, expressed -
6 Sobic.005G164800 pumilio-family RNA binding repeat domain containing protein, expressed -
7 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
8 Sobic.002G259301 - K15382: SLC50A, solute carrier family 50 (sugar transporter)
9 Sobic.001G457600 piwi domain containing protein, expressed -
10 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
11 Sobic.009G042600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G258000 homologous to AGL2 and AGL4: expression analysis and mapping data suggest that it is the ortholog of OsMADS24.(PubMedID : 9065695)@OsMADS8 - MADS-box family gene with MIKCc type-box, expressed -
13 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
14 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
15 Sobic.006G097300 F-box protein FBW2, putative, expressed -
16 Sobic.003G381100 OsMADS21 - MADS-box family gene with MIKCc type-box, expressed -
17 Sobic.008G098700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat containing protein, expressed -
18 Sobic.004G218000 SET domain containing protein, expressed -
19 Sobic.003G217300 zinc finger, C3HC4 type family protein, expressed -
20 Sobic.010G194600 CW-type Zinc Finger, putative, expressed -


Gene co-expression network
sample Sobic008G161100 Sobic008G161100 Sobic001G152600 Sobic001G152600 Sobic008G161100--Sobic001G152600 Sobic001G137400 Sobic001G137400 Sobic008G161100--Sobic001G137400 Sobic007G193300 Sobic007G193300 Sobic008G161100--Sobic007G193300 Sobic005G166100 Sobic005G166100 Sobic008G161100--Sobic005G166100 Sobic001G137500 Sobic001G137500 Sobic008G161100--Sobic001G137500 Sobic005G164800 Sobic005G164800 Sobic008G161100--Sobic005G164800 Sobic001G288000 Sobic001G288000 Sobic008G161100--Sobic001G288000 Sobic002G259301 Sobic002G259301 Sobic008G161100--Sobic002G259301 Sobic001G457600 Sobic001G457600 Sobic008G161100--Sobic001G457600 Sobic001G152600--Sobic008G161100 Sobic001G163300 Sobic001G163300 Sobic001G152600--Sobic001G163300 Sobic001G152600--Sobic001G137400 Sobic005G202000 Sobic005G202000 Sobic001G152600--Sobic005G202000 Sobic003G191600 Sobic003G191600 Sobic001G152600--Sobic003G191600 Sobic003G207000 Sobic003G207000 Sobic001G152600--Sobic003G207000 Sobic001G217300 Sobic001G217300 Sobic001G152600--Sobic001G217300 Sobic001G152600--Sobic005G166100 Sobic008G098700 Sobic008G098700 Sobic001G152600--Sobic008G098700 Sobic001G137400--Sobic001G137500 Sobic002G258000 Sobic002G258000 Sobic001G137400--Sobic002G258000 Sobic001G137400--Sobic007G193300 Sobic001G137400--Sobic001G457600 Sobic010G194600 Sobic010G194600 Sobic001G137400--Sobic010G194600 Sobic001G137400--Sobic001G288000 Sobic009G243000 Sobic009G243000 Sobic001G137400--Sobic009G243000 Sobic001G086400 Sobic001G086400 Sobic001G137400--Sobic001G086400 Sobic001G419500 Sobic001G419500 Sobic001G137400--Sobic001G419500 Sobic007G193300--Sobic001G137500 Sobic001G216400 Sobic001G216400 Sobic007G193300--Sobic001G216400 Sobic007G193300--Sobic001G419500 Sobic007G193300--Sobic005G166100 Sobic003G381100 Sobic003G381100 Sobic007G193300--Sobic003G381100 Sobic007G128200 Sobic007G128200 Sobic007G193300--Sobic007G128200 Sobic004G234600 Sobic004G234600 Sobic007G193300--Sobic004G234600 Sobic007G193300--Sobic001G457600 Sobic002G121900 Sobic002G121900 Sobic007G193300--Sobic002G121900 Sobic005G166100--Sobic001G216400 Sobic004G056000 Sobic004G056000 Sobic005G166100--Sobic004G056000 Sobic009G063700 Sobic009G063700 Sobic005G166100--Sobic009G063700 Sobic005G166100--Sobic007G128200 Sobic005G166100--Sobic003G381100 Sobic009G075500 Sobic009G075500 Sobic005G166100--Sobic009G075500 Sobic005G166100--Sobic001G419500 Sobic005G166100--Sobic007G193300 Sobic006G097300 Sobic006G097300 Sobic005G166100--Sobic006G097300 Sobic001G137500--Sobic001G419500 Sobic001G137500--Sobic002G258000 Sobic001G137500--Sobic001G457600 Sobic002G178700 Sobic002G178700 Sobic001G137500--Sobic002G178700 Sobic003G006000 Sobic003G006000 Sobic001G137500--Sobic003G006000 Sobic001G137500--Sobic007G193300 Sobic001G137500--Sobic001G137400 Sobic001G137500--Sobic010G194600 Sobic003G088600 Sobic003G088600 Sobic001G137500--Sobic003G088600 Sobic003G217300 Sobic003G217300 Sobic005G164800--Sobic003G217300 Sobic004G218000 Sobic004G218000 Sobic005G164800--Sobic004G218000 Sobic001G171100 Sobic001G171100 Sobic005G164800--Sobic001G171100 Sobic001G377600 Sobic001G377600 Sobic005G164800--Sobic001G377600 Sobic010G067200 Sobic010G067200 Sobic005G164800--Sobic010G067200 Sobic003G027200 Sobic003G027200 Sobic005G164800--Sobic003G027200 Sobic005G164800--Sobic007G193300 Sobic008G072900 Sobic008G072900 Sobic005G164800--Sobic008G072900 Sobic007G191200 Sobic007G191200 Sobic005G164800--Sobic007G191200 Sobic001G288000--Sobic001G137400 Sobic001G288000--Sobic001G137500 Sobic003G091300 Sobic003G091300 Sobic001G288000--Sobic003G091300 Sobic001G288000--Sobic002G258000 Sobic001G288000--Sobic007G193300 Sobic002G299200 Sobic002G299200 Sobic001G288000--Sobic002G299200 Sobic001G288000--Sobic003G006000 Sobic001G288000--Sobic002G178700 Sobic001G288000--Sobic001G419500 Sobic002G259301--Sobic002G299200 Sobic003G142200 Sobic003G142200 Sobic002G259301--Sobic003G142200 Sobic002G259301--Sobic007G193300 Sobic002G259301--Sobic005G164800 Sobic002G259301--Sobic001G288000 Sobic007G205300 Sobic007G205300 Sobic002G259301--Sobic007G205300 Sobic001G287900 Sobic001G287900 Sobic002G259301--Sobic001G287900 Sobic002G259301--Sobic003G217300 Sobic003G027000 Sobic003G027000 Sobic002G259301--Sobic003G027000 Sobic001G457600--Sobic001G137500 Sobic001G457600--Sobic010G194600 Sobic001G457600--Sobic001G419500 Sobic001G457600--Sobic002G258000 Sobic001G457600--Sobic007G128200 Sobic001G457600--Sobic004G234600 Sobic001G457600--Sobic009G063700 Sobic004G281000 Sobic004G281000 Sobic001G457600--Sobic004G281000 Sobic001G457600--Sobic007G193300
Octagon: transcription factors


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