Gene annotation
Transcriptome id Sobic.001G235800.1
Synonym Sb01g020830
Functional annotation peroxidase precursor, putative, expressed
UniProt C5X0F5
Pfam PF00141
Panther DB PTHR31388 PTHR31388:SF31
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT5G19890 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os10g02070.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a006779 , Zm00025a017719
Brachypodium -
Barley HORVU1Hr1G020720.1 , HORVU1Hr1G020720.2
Wheat TraesCS1D02G096200 , TraesCS1B02G115700 , TraesCS1A02G104100 , TraesCS1A02G104200 , TraesCS1B02G115800 , TraesCS1D02G096300
Populus PNT01598


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G252500 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSAUR28 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
2 Sobic.004G159733 - -
3 Sobic.010G206800 expressed protein -
4 Sobic.003G404600 regulatory protein, putative, expressed -
5 Sobic.004G062500 "4-coumaroyl-CoA synthetase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Brown midrib2 (Bmr2) encodes the major 4-coumarate:coenzyme A ligase involved in lignin biosynthesis(PubMedID : 22313236)@4-Coumarate: Coenzyme A Ligase (4CL)(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
6 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
7 Sobic.010G185000 VQ domain containing protein, putative, expressed -
8 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
9 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
10 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
11 Sobic.001G107400 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.010G195500 reductase, putative, expressed -
14 Sobic.003G119500 expressed protein -
15 Sobic.010G071400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.010G239500 ubiquitin family protein, putative, expressed K08770: ubiquitin C
17 Sobic.006G274933 - -
18 Sobic.005G093000 - -
19 Sobic.003G368600 terpene synthase, putative, expressed -
20 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1


Gene co-expression network
sample Sobic001G235800 Sobic001G235800 Sobic010G252500 Sobic010G252500 Sobic001G235800--Sobic010G252500 Sobic004G159733 Sobic004G159733 Sobic001G235800--Sobic004G159733 Sobic010G206800 Sobic010G206800 Sobic001G235800--Sobic010G206800 Sobic003G404600 Sobic003G404600 Sobic001G235800--Sobic003G404600 Sobic004G062500 Sobic004G062500 Sobic001G235800--Sobic004G062500 Sobic005G018700 Sobic005G018700 Sobic001G235800--Sobic005G018700 Sobic010G185000 Sobic010G185000 Sobic001G235800--Sobic010G185000 Sobic010G268400 Sobic010G268400 Sobic001G235800--Sobic010G268400 Sobic003G366600 Sobic003G366600 Sobic001G235800--Sobic003G366600 Sobic007G218800 Sobic007G218800 Sobic010G252500--Sobic007G218800 Sobic007G030501 Sobic007G030501 Sobic010G252500--Sobic007G030501 Sobic010G252500--Sobic004G062500 Sobic002G003800 Sobic002G003800 Sobic010G252500--Sobic002G003800 Sobic006G197100 Sobic006G197100 Sobic010G252500--Sobic006G197100 Sobic010G252500--Sobic003G404600 Sobic003G343900 Sobic003G343900 Sobic010G252500--Sobic003G343900 Sobic003G311800 Sobic003G311800 Sobic010G252500--Sobic003G311800 Sobic004G139300 Sobic004G139300 Sobic010G252500--Sobic004G139300 Sobic004G159733--Sobic005G018700 Sobic010G270500 Sobic010G270500 Sobic004G159733--Sobic010G270500 Sobic007G151300 Sobic007G151300 Sobic004G159733--Sobic007G151300 Sobic001G050100 Sobic001G050100 Sobic004G159733--Sobic001G050100 Sobic002G336700 Sobic002G336700 Sobic004G159733--Sobic002G336700 Sobic004G159733--Sobic010G185000 Sobic006G103000 Sobic006G103000 Sobic004G159733--Sobic006G103000 Sobic003G007600 Sobic003G007600 Sobic004G159733--Sobic003G007600 Sobic003G299300 Sobic003G299300 Sobic004G159733--Sobic003G299300 Sobic001G360400 Sobic001G360400 Sobic010G206800--Sobic001G360400 Sobic010G206800--Sobic007G030501 Sobic003G368600 Sobic003G368600 Sobic010G206800--Sobic003G368600 Sobic002G261300 Sobic002G261300 Sobic010G206800--Sobic002G261300 Sobic007G047500 Sobic007G047500 Sobic010G206800--Sobic007G047500 Sobic006G274933 Sobic006G274933 Sobic010G206800--Sobic006G274933 Sobic010G206800--Sobic001G235800 Sobic010G206800--Sobic010G252500 Sobic001G159900 Sobic001G159900 Sobic010G206800--Sobic001G159900 Sobic006G059700 Sobic006G059700 Sobic003G404600--Sobic006G059700 Sobic003G404600--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic003G404600--Sobic001G147900 Sobic003G404600--Sobic010G185000 Sobic003G404600--Sobic006G197100 Sobic004G227800 Sobic004G227800 Sobic003G404600--Sobic004G227800 Sobic004G024100 Sobic004G024100 Sobic003G404600--Sobic004G024100 Sobic004G348400 Sobic004G348400 Sobic003G404600--Sobic004G348400 Sobic004G349125 Sobic004G349125 Sobic003G404600--Sobic004G349125 Sobic004G062500--Sobic010G252500 Sobic010G195500 Sobic010G195500 Sobic004G062500--Sobic010G195500 Sobic004G212300 Sobic004G212300 Sobic004G062500--Sobic004G212300 Sobic004G062500--Sobic007G218800 Sobic010G085800 Sobic010G085800 Sobic004G062500--Sobic010G085800 Sobic003G119500 Sobic003G119500 Sobic004G062500--Sobic003G119500 Sobic004G062500--Sobic010G268400 Sobic001G494000 Sobic001G494000 Sobic004G062500--Sobic001G494000 Sobic003G219800 Sobic003G219800 Sobic004G062500--Sobic003G219800 Sobic002G245100 Sobic002G245100 Sobic005G018700--Sobic002G245100 Sobic002G017800 Sobic002G017800 Sobic005G018700--Sobic002G017800 Sobic005G018700--Sobic006G103000 Sobic005G018700--Sobic010G185000 Sobic003G429000 Sobic003G429000 Sobic005G018700--Sobic003G429000 Sobic003G037800 Sobic003G037800 Sobic005G018700--Sobic003G037800 Sobic004G340900 Sobic004G340900 Sobic005G018700--Sobic004G340900 Sobic005G018700--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic005G018700--Sobic003G192100 Sobic002G247600 Sobic002G247600 Sobic010G185000--Sobic002G247600 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic009G240600 Sobic009G240600 Sobic010G185000--Sobic009G240600 Sobic010G185000--Sobic004G348400 Sobic002G375400 Sobic002G375400 Sobic010G185000--Sobic002G375400 Sobic001G481400 Sobic001G481400 Sobic010G185000--Sobic001G481400 Sobic005G206601 Sobic005G206601 Sobic010G185000--Sobic005G206601 Sobic010G185000--Sobic007G151300 Sobic002G329000 Sobic002G329000 Sobic010G268400--Sobic002G329000 Sobic001G516600 Sobic001G516600 Sobic010G268400--Sobic001G516600 Sobic010G268400--Sobic003G192100 Sobic005G093000 Sobic005G093000 Sobic010G268400--Sobic005G093000 Sobic001G107400 Sobic001G107400 Sobic010G268400--Sobic001G107400 Sobic010G268400--Sobic003G037800 Sobic010G268400--Sobic002G245100 Sobic010G268400--Sobic003G429000 Sobic010G268400--Sobic010G195500 Sobic003G366600--Sobic004G348400 Sobic006G044100 Sobic006G044100 Sobic003G366600--Sobic006G044100 Sobic006G157900 Sobic006G157900 Sobic003G366600--Sobic006G157900 Sobic003G366600--Sobic010G185000 Sobic003G366600--Sobic003G404600 Sobic003G366600--Sobic001G481400 Sobic001G403000 Sobic001G403000 Sobic003G366600--Sobic001G403000 Sobic009G072900 Sobic009G072900 Sobic003G366600--Sobic009G072900 Sobic003G366600--Sobic006G059700
Octagon: transcription factors


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