Gene annotation
Transcriptome id Sobic.001G307700.1
Synonym Sb01g029990
Functional annotation expressed protein
UniProt C5WTF6
Pfam PF02040
Panther DB PTHR10283 PTHR10283:SF98
NCBI CDD KOG2639; Sodium sulfate symporter and related arsenite permeases
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015700arsenite transport GO:0015105arsenite transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT1G02260 : Divalent ion symporter
RAP-DB (Rice) LOC_Os10g39980.1 : expressed protein
MaizeGDB (Corn) Zm00025a017700 , Zm00025a000142 , Zm00025a003264 , Zm00025a032761 , Zm00025a006747
Brachypodium KQK24090 , KQJ97708 , KQK01440 , PNT78202 , PNT78201 , PNT78200 , KQK23658 , PNT78199 , PNT78198
Barley HORVU1Hr1G037760.14 , HORVU4Hr1G079710.8 , HORVU4Hr1G079710.9 , HORVU4Hr1G079710.2 , HORVU4Hr1G079710.3 , HORVU4Hr1G079710.1 , HORVU4Hr1G079710.6 , HORVU4Hr1G079710.7 , HORVU4Hr1G079710.4 , HORVU4Hr1G079710.5 , HORVU1Hr1G053160.1 , HORVU1Hr1G037760.8 , HORVU1Hr1G037760.9 , HORVU6Hr1G092430.8 , HORVU6Hr1G092430.9 , HORVU6Hr1G092430.6 , HORVU1Hr1G037760.1 , HORVU6Hr1G092430.4 , HORVU6Hr1G092430.5 , HORVU6Hr1G092430.2 , HORVU6Hr1G092430.3 , HORVU1Hr1G037760.6 , HORVU6Hr1G092430.1 , HORVU1Hr1G037760.12 , HORVU1Hr1G037760.13 , HORVU1Hr1G037760.10 , HORVU1Hr1G037760.11 , HORVU1Hr1G037760.16 , HORVU1Hr1G037760.15 , HORVU4Hr1G086800.1 , HORVU4Hr1G086800.2 , HORVU4Hr1G086800.3 , HORVU6Hr1G092430.14 , HORVU6Hr1G092430.15 , HORVU6Hr1G092430.16 , HORVU6Hr1G092430.11 , HORVU6Hr1G092430.12 , HORVU6Hr1G092430.7 , HORVU6Hr1G092430.10 , HORVU1Hr1G037760.2 , HORVU1Hr1G037760.3 , HORVU1Hr1G037760.4 , HORVU1Hr1G053160.2 , HORVU1Hr1G053160.3 , HORVU1Hr1G053160.4 , HORVU1Hr1G053160.5 , HORVU1Hr1G037760.5 , HORVU1Hr1G037760.7 , HORVU4Hr1G079710.10 , HORVU6Hr1G092430.13
Wheat TraesCS1A02G142400 , TraesCS1D02G141400 , TraesCS4A02G412500 , TraesCS4D02G354900 , TraesCS1B02G221100 , TraesCS1A02G207300 , TraesCS6B02G444100 , TraesCS6B02G444100 , TraesCS5A02G529900 , TraesCS4B02G312600 , TraesCS1B02G159400 , TraesCS1D02G210500 , TraesCS6D02G385600 , TraesCS4D02G310100 , TraesCS6A02G402000 , TraesCS4B02G361900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G254900 membrane protein, putative, expressed -
2 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
3 Sobic.007G090472 - -
4 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
5 Sobic.007G014200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.010G070400 DNA binding protein, putative, expressed -
7 Sobic.001G277500 TKL_IRAK_DUF26-la.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
9 Sobic.010G071400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.010G180100 transferase family protein, putative, expressed -
11 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
12 Sobic.007G009500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CR4L.6 - The CR4L subfamily has homology with Crinkly4, expressed -
13 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.010G096700 leaf senescence related protein, putative, expressed -
15 Sobic.008G068300 transferase family protein, putative, expressed -
16 Sobic.001G483600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase APK1B, chloroplast precursor, putative, expressed -
17 Sobic.005G110490 - -
18 Sobic.001G008900 - -
19 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
20 Sobic.003G087700 glycosyltransferase protein, putative, expressed -


Gene co-expression network
sample Sobic001G307700 Sobic001G307700 Sobic002G254900 Sobic002G254900 Sobic001G307700--Sobic002G254900 Sobic003G227700 Sobic003G227700 Sobic001G307700--Sobic003G227700 Sobic007G090472 Sobic007G090472 Sobic001G307700--Sobic007G090472 Sobic001G360700 Sobic001G360700 Sobic001G307700--Sobic001G360700 Sobic007G014200 Sobic007G014200 Sobic001G307700--Sobic007G014200 Sobic010G070400 Sobic010G070400 Sobic001G307700--Sobic010G070400 Sobic001G277500 Sobic001G277500 Sobic001G307700--Sobic001G277500 Sobic010G069900 Sobic010G069900 Sobic001G307700--Sobic010G069900 Sobic010G071400 Sobic010G071400 Sobic001G307700--Sobic010G071400 Sobic001G002800 Sobic001G002800 Sobic002G254900--Sobic001G002800 Sobic010G096700 Sobic010G096700 Sobic002G254900--Sobic010G096700 Sobic010G180100 Sobic010G180100 Sobic002G254900--Sobic010G180100 Sobic004G047600 Sobic004G047600 Sobic002G254900--Sobic004G047600 Sobic002G254900--Sobic001G360700 Sobic001G503000 Sobic001G503000 Sobic002G254900--Sobic001G503000 Sobic001G506600 Sobic001G506600 Sobic002G254900--Sobic001G506600 Sobic002G254900--Sobic007G090472 Sobic002G167600 Sobic002G167600 Sobic002G254900--Sobic002G167600 Sobic003G227700--Sobic010G069900 Sobic003G257400 Sobic003G257400 Sobic003G227700--Sobic003G257400 Sobic003G227700--Sobic010G071400 Sobic006G003100 Sobic006G003100 Sobic003G227700--Sobic006G003100 Sobic001G006201 Sobic001G006201 Sobic003G227700--Sobic001G006201 Sobic007G158800 Sobic007G158800 Sobic003G227700--Sobic007G158800 Sobic003G000100 Sobic003G000100 Sobic003G227700--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic003G227700--Sobic010G152400 Sobic004G106100 Sobic004G106100 Sobic003G227700--Sobic004G106100 Sobic010G028100 Sobic010G028100 Sobic007G090472--Sobic010G028100 Sobic007G073000 Sobic007G073000 Sobic007G090472--Sobic007G073000 Sobic001G360500 Sobic001G360500 Sobic007G090472--Sobic001G360500 Sobic010G082000 Sobic010G082000 Sobic007G090472--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic007G090472--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic007G090472--Sobic006G135300 Sobic006G229100 Sobic006G229100 Sobic007G090472--Sobic006G229100 Sobic007G090472--Sobic001G503000 Sobic003G215300 Sobic003G215300 Sobic007G090472--Sobic003G215300 Sobic001G360700--Sobic004G047600 Sobic007G047300 Sobic007G047300 Sobic001G360700--Sobic007G047300 Sobic001G360700--Sobic002G167600 Sobic002G203900 Sobic002G203900 Sobic001G360700--Sobic002G203900 Sobic001G471800 Sobic001G471800 Sobic001G360700--Sobic001G471800 Sobic001G360700--Sobic002G254900 Sobic002G146000 Sobic002G146000 Sobic001G360700--Sobic002G146000 Sobic004G193500 Sobic004G193500 Sobic001G360700--Sobic004G193500 Sobic001G072600 Sobic001G072600 Sobic001G360700--Sobic001G072600 Sobic007G014200--Sobic010G070400 Sobic005G175900 Sobic005G175900 Sobic007G014200--Sobic005G175900 Sobic007G014200--Sobic001G277500 Sobic001G263300 Sobic001G263300 Sobic007G014200--Sobic001G263300 Sobic006G031100 Sobic006G031100 Sobic007G014200--Sobic006G031100 Sobic007G014200--Sobic003G215300 Sobic010G191600 Sobic010G191600 Sobic007G014200--Sobic010G191600 Sobic007G014200--Sobic004G106100 Sobic007G090600 Sobic007G090600 Sobic007G014200--Sobic007G090600 Sobic004G029300 Sobic004G029300 Sobic010G070400--Sobic004G029300 Sobic010G070400--Sobic007G014200 Sobic010G070400--Sobic003G215300 Sobic004G271800 Sobic004G271800 Sobic010G070400--Sobic004G271800 Sobic010G070400--Sobic005G175900 Sobic010G070400--Sobic003G000100 Sobic010G070400--Sobic001G277500 Sobic010G070400--Sobic007G090600 Sobic003G183300 Sobic003G183300 Sobic010G070400--Sobic003G183300 Sobic001G277500--Sobic010G028100 Sobic001G277500--Sobic010G070400 Sobic001G277500--Sobic003G000100 Sobic001G277500--Sobic010G082000 Sobic001G277500--Sobic006G092700 Sobic001G277500--Sobic007G014200 Sobic001G277500--Sobic006G031100 Sobic006G003600 Sobic006G003600 Sobic001G277500--Sobic006G003600 Sobic006G196400 Sobic006G196400 Sobic001G277500--Sobic006G196400 Sobic010G069900--Sobic003G227700 Sobic010G069900--Sobic010G071400 Sobic004G212300 Sobic004G212300 Sobic010G069900--Sobic004G212300 Sobic010G192432 Sobic010G192432 Sobic010G069900--Sobic010G192432 Sobic010G069900--Sobic001G006201 Sobic001G483600 Sobic001G483600 Sobic010G069900--Sobic001G483600 Sobic009G102600 Sobic009G102600 Sobic010G069900--Sobic009G102600 Sobic010G101900 Sobic010G101900 Sobic010G069900--Sobic010G101900 Sobic004G078800 Sobic004G078800 Sobic010G069900--Sobic004G078800 Sobic006G274933 Sobic006G274933 Sobic010G071400--Sobic006G274933 Sobic010G071400--Sobic003G227700 Sobic002G183700 Sobic002G183700 Sobic010G071400--Sobic002G183700 Sobic003G119500 Sobic003G119500 Sobic010G071400--Sobic003G119500 Sobic004G029100 Sobic004G029100 Sobic010G071400--Sobic004G029100 Sobic004G322100 Sobic004G322100 Sobic010G071400--Sobic004G322100 Sobic003G140700 Sobic003G140700 Sobic010G071400--Sobic003G140700 Sobic008G019800 Sobic008G019800 Sobic010G071400--Sobic008G019800 Sobic006G256900 Sobic006G256900 Sobic010G071400--Sobic006G256900
Octagon: transcription factors


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