Gene annotation
Transcriptome id Sobic.004G159500.1
Synonym LEP
Functional annotation AP2 domain containing protein, expressed
UniProt A0A194YQ31
Pfam PF00847
Panther DB PTHR31677 PTHR31677:SF18
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G28160 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g32790.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a014067
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G053200 transcription elongation factor 1, putative, expressed -
2 Sobic.001G414300 - -
3 Sobic.008G184700 CND41, chloroplast nucleoid DNA binding protein, putative, expressed -
4 Sobic.003G143000 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
5 Sobic.002G391800 peroxidase, putative, expressed K00430: peroxidase
6 Sobic.001G232700 - -
7 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
8 Sobic.001G539300 expressed protein -
9 Sobic.001G539300 expressed protein -
10 Sobic.001G539300 expressed protein -
11 Sobic.001G539300 expressed protein -
12 Sobic.001G539300 expressed protein -
13 Sobic.001G539300 expressed protein -
14 Sobic.005G038100 sialyltransferase family domain containing protein, expressed -
15 Sobic.008G026000 expressed protein -
16 Sobic.010G009900 - -
17 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.010G156400 expressed protein -
19 Sobic.003G020400 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.009G178550 - -


Gene co-expression network
sample Sobic004G159500 Sobic004G159500 Sobic010G053200 Sobic010G053200 Sobic004G159500--Sobic010G053200 Sobic001G414300 Sobic001G414300 Sobic004G159500--Sobic001G414300 Sobic008G184700 Sobic008G184700 Sobic004G159500--Sobic008G184700 Sobic003G143000 Sobic003G143000 Sobic004G159500--Sobic003G143000 Sobic002G391800 Sobic002G391800 Sobic004G159500--Sobic002G391800 Sobic001G232700 Sobic001G232700 Sobic004G159500--Sobic001G232700 Sobic007G054900 Sobic007G054900 Sobic004G159500--Sobic007G054900 Sobic001G539300 Sobic001G539300 Sobic004G159500--Sobic001G539300 Sobic010G053200--Sobic004G159500 Sobic010G053200--Sobic001G539300 Sobic004G292600 Sobic004G292600 Sobic010G053200--Sobic004G292600 Sobic010G156400 Sobic010G156400 Sobic010G053200--Sobic010G156400 Sobic001G414300--Sobic008G184700 Sobic001G414300--Sobic001G539300 Sobic001G414300--Sobic010G156400 Sobic009G178550 Sobic009G178550 Sobic001G414300--Sobic009G178550 Sobic008G184700--Sobic001G414300 Sobic008G184700--Sobic001G539300 Sobic008G184700--Sobic010G156400 Sobic008G184700--Sobic009G178550 Sobic003G020400 Sobic003G020400 Sobic003G143000--Sobic003G020400 Sobic010G045500 Sobic010G045500 Sobic003G143000--Sobic010G045500 Sobic003G143000--Sobic001G232700 Sobic003G143000--Sobic007G054900 Sobic003G143000--Sobic004G159500 Sobic003G143000--Sobic002G391800 Sobic003G143000--Sobic004G292600 Sobic003G430500 Sobic003G430500 Sobic003G143000--Sobic003G430500 Sobic010G009900 Sobic010G009900 Sobic003G143000--Sobic010G009900 Sobic001G234900 Sobic001G234900 Sobic002G391800--Sobic001G234900 Sobic005G160700 Sobic005G160700 Sobic002G391800--Sobic005G160700 Sobic001G342400 Sobic001G342400 Sobic002G391800--Sobic001G342400 Sobic001G242100 Sobic001G242100 Sobic002G391800--Sobic001G242100 Sobic001G379400 Sobic001G379400 Sobic002G391800--Sobic001G379400 Sobic002G391800--Sobic001G232700 Sobic002G377600 Sobic002G377600 Sobic002G391800--Sobic002G377600 Sobic005G222500 Sobic005G222500 Sobic002G391800--Sobic005G222500 Sobic002G391800--Sobic010G045500 Sobic001G232700--Sobic001G242100 Sobic001G232700--Sobic002G391800 Sobic001G232700--Sobic005G222500 Sobic003G206400 Sobic003G206400 Sobic001G232700--Sobic003G206400 Sobic010G128400 Sobic010G128400 Sobic001G232700--Sobic010G128400 Sobic009G065800 Sobic009G065800 Sobic001G232700--Sobic009G065800 Sobic002G301900 Sobic002G301900 Sobic001G232700--Sobic002G301900 Sobic002G063600 Sobic002G063600 Sobic001G232700--Sobic002G063600 Sobic001G232700--Sobic010G045500 Sobic007G054900--Sobic010G009900 Sobic001G242000 Sobic001G242000 Sobic007G054900--Sobic001G242000 Sobic008G158600 Sobic008G158600 Sobic007G054900--Sobic008G158600 Sobic007G054900--Sobic004G292600 Sobic002G012300 Sobic002G012300 Sobic007G054900--Sobic002G012300 Sobic005G011900 Sobic005G011900 Sobic007G054900--Sobic005G011900 Sobic002G369400 Sobic002G369400 Sobic007G054900--Sobic002G369400 Sobic001G162233 Sobic001G162233 Sobic007G054900--Sobic001G162233 Sobic008G158501 Sobic008G158501 Sobic007G054900--Sobic008G158501 Sobic001G539300--Sobic001G539300 Sobic001G539300--Sobic010G156400 Sobic001G539300--Sobic009G178550 Sobic001G539300--Sobic008G184700 Sobic001G539300--Sobic004G292600
Octagon: transcription factors


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