Gene annotation
Transcriptome id Sobic.003G020400.1
Synonym Sb03g001820
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XL12
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF280
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G45910 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g11750.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a035922 , Zm00025a035917
Brachypodium KQK04211 , KQK03306
Barley HORVU3Hr1G027990.4 , HORVU3Hr1G027990.5 , HORVU3Hr1G027990.1 , HORVU3Hr1G027990.3
Wheat TraesCS3B02G163200 , TraesCS2D02G479800 , TraesCS3A02G141400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G074800 expressed protein -
2 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.001G414300 - -
4 Sobic.008G184700 CND41, chloroplast nucleoid DNA binding protein, putative, expressed -
5 Sobic.003G143000 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
6 Sobic.005G163800 laccase precursor protein, putative, expressed K05909: laccase
7 Sobic.001G539300 expressed protein -
8 Sobic.001G539300 expressed protein -
9 Sobic.001G539300 expressed protein -
10 Sobic.001G539300 expressed protein -
11 Sobic.001G539300 expressed protein -
12 Sobic.001G539300 expressed protein -
13 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
14 Sobic.010G009900 - -
15 Sobic.010G156400 expressed protein -
16 Sobic.005G011900 - -
17 Sobic.009G178550 - -
18 Sobic.006G018100 cupin domain containing protein, expressed -
19 Sobic.007G085500 glycosyl hydrolases family 16, putative, expressed -
20 Sobic.010G146300 DEFL9 - Defensin and Defensin-like DEFL family, expressed K08235: xyloglucan:xyloglucosyl transferase


Gene co-expression network
sample Sobic003G020400 Sobic003G020400 Sobic010G074800 Sobic010G074800 Sobic003G020400--Sobic010G074800 Sobic004G292600 Sobic004G292600 Sobic003G020400--Sobic004G292600 Sobic001G414300 Sobic001G414300 Sobic003G020400--Sobic001G414300 Sobic008G184700 Sobic008G184700 Sobic003G020400--Sobic008G184700 Sobic003G143000 Sobic003G143000 Sobic003G020400--Sobic003G143000 Sobic005G163800 Sobic005G163800 Sobic003G020400--Sobic005G163800 Sobic001G539300 Sobic001G539300 Sobic003G020400--Sobic001G539300 Sobic010G074800--Sobic003G020400 Sobic004G106000 Sobic004G106000 Sobic010G074800--Sobic004G106000 Sobic007G085500 Sobic007G085500 Sobic010G074800--Sobic007G085500 Sobic002G090900 Sobic002G090900 Sobic010G074800--Sobic002G090900 Sobic010G074800--Sobic005G163800 Sobic010G146300 Sobic010G146300 Sobic010G074800--Sobic010G146300 Sobic001G293000 Sobic001G293000 Sobic010G074800--Sobic001G293000 Sobic002G412600 Sobic002G412600 Sobic010G074800--Sobic002G412600 Sobic010G045500 Sobic010G045500 Sobic010G074800--Sobic010G045500 Sobic004G292600--Sobic001G539300 Sobic001G162233 Sobic001G162233 Sobic004G292600--Sobic001G162233 Sobic010G156400 Sobic010G156400 Sobic004G292600--Sobic010G156400 Sobic005G011900 Sobic005G011900 Sobic004G292600--Sobic005G011900 Sobic001G414300--Sobic008G184700 Sobic001G414300--Sobic001G539300 Sobic001G414300--Sobic010G156400 Sobic009G178550 Sobic009G178550 Sobic001G414300--Sobic009G178550 Sobic008G184700--Sobic001G414300 Sobic008G184700--Sobic001G539300 Sobic008G184700--Sobic010G156400 Sobic008G184700--Sobic009G178550 Sobic003G143000--Sobic003G020400 Sobic003G143000--Sobic010G045500 Sobic001G232700 Sobic001G232700 Sobic003G143000--Sobic001G232700 Sobic007G054900 Sobic007G054900 Sobic003G143000--Sobic007G054900 Sobic004G159500 Sobic004G159500 Sobic003G143000--Sobic004G159500 Sobic002G391800 Sobic002G391800 Sobic003G143000--Sobic002G391800 Sobic003G143000--Sobic004G292600 Sobic003G430500 Sobic003G430500 Sobic003G143000--Sobic003G430500 Sobic010G009900 Sobic010G009900 Sobic003G143000--Sobic010G009900 Sobic005G163800--Sobic002G412600 Sobic004G180700 Sobic004G180700 Sobic005G163800--Sobic004G180700 Sobic005G163800--Sobic001G293000 Sobic005G163800--Sobic002G090900 Sobic006G202600 Sobic006G202600 Sobic005G163800--Sobic006G202600 Sobic004G301600 Sobic004G301600 Sobic005G163800--Sobic004G301600 Sobic006G170600 Sobic006G170600 Sobic005G163800--Sobic006G170600 Sobic005G163800--Sobic010G146300 Sobic002G122400 Sobic002G122400 Sobic005G163800--Sobic002G122400 Sobic001G539300--Sobic001G539300 Sobic001G539300--Sobic010G156400 Sobic001G539300--Sobic009G178550 Sobic001G539300--Sobic008G184700 Sobic001G539300--Sobic004G292600
Octagon: transcription factors


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