Gene annotation
Transcriptome id Sobic.003G143000.1,Sobic.003G143000.2
Synonym Sb03g012360
Functional annotation flavonol synthase/flavanone 3-hydroxylase, putative, expressed
UniProt C5XI47 , C5XI42
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF204
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G78550 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein,senescence-related gene 1
RAP-DB (Rice) LOC_Os10g40880.1 : flavonol synthase/flavanone 3-hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a002545 , Zm00025a024266
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G020400 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
3 Sobic.001G232700 - -
4 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
5 Sobic.004G159500 AP2 domain containing protein, expressed K09286: EREBP-like factor
6 Sobic.002G391800 peroxidase, putative, expressed K00430: peroxidase
7 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.003G430500 OsCML23 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
9 Sobic.010G009900 - -
10 Sobic.001G242100 expressed protein -
11 Sobic.008G002800 fatty acid desaturase, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
12 Sobic.001G414300 - -
13 Sobic.004G165100 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@RCN2 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
14 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
15 Sobic.006G234466 - -
16 Sobic.008G026000 expressed protein -
17 Sobic.006G102650 - -
18 Sobic.005G163800 laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.008G184700 CND41, chloroplast nucleoid DNA binding protein, putative, expressed -
20 Sobic.010G053200 transcription elongation factor 1, putative, expressed -


Gene co-expression network
sample Sobic003G143000 Sobic003G143000 Sobic003G020400 Sobic003G020400 Sobic003G143000--Sobic003G020400 Sobic010G045500 Sobic010G045500 Sobic003G143000--Sobic010G045500 Sobic001G232700 Sobic001G232700 Sobic003G143000--Sobic001G232700 Sobic007G054900 Sobic007G054900 Sobic003G143000--Sobic007G054900 Sobic004G159500 Sobic004G159500 Sobic003G143000--Sobic004G159500 Sobic002G391800 Sobic002G391800 Sobic003G143000--Sobic002G391800 Sobic004G292600 Sobic004G292600 Sobic003G143000--Sobic004G292600 Sobic003G430500 Sobic003G430500 Sobic003G143000--Sobic003G430500 Sobic010G009900 Sobic010G009900 Sobic003G143000--Sobic010G009900 Sobic010G074800 Sobic010G074800 Sobic003G020400--Sobic010G074800 Sobic003G020400--Sobic004G292600 Sobic001G414300 Sobic001G414300 Sobic003G020400--Sobic001G414300 Sobic008G184700 Sobic008G184700 Sobic003G020400--Sobic008G184700 Sobic003G020400--Sobic003G143000 Sobic005G163800 Sobic005G163800 Sobic003G020400--Sobic005G163800 Sobic001G539300 Sobic001G539300 Sobic003G020400--Sobic001G539300 Sobic001G242100 Sobic001G242100 Sobic010G045500--Sobic001G242100 Sobic002G301900 Sobic002G301900 Sobic010G045500--Sobic002G301900 Sobic006G234466 Sobic006G234466 Sobic010G045500--Sobic006G234466 Sobic004G180700 Sobic004G180700 Sobic010G045500--Sobic004G180700 Sobic005G215400 Sobic005G215400 Sobic010G045500--Sobic005G215400 Sobic004G322800 Sobic004G322800 Sobic010G045500--Sobic004G322800 Sobic010G270700 Sobic010G270700 Sobic010G045500--Sobic010G270700 Sobic004G301600 Sobic004G301600 Sobic010G045500--Sobic004G301600 Sobic008G128200 Sobic008G128200 Sobic010G045500--Sobic008G128200 Sobic001G232700--Sobic001G242100 Sobic001G232700--Sobic002G391800 Sobic005G222500 Sobic005G222500 Sobic001G232700--Sobic005G222500 Sobic003G206400 Sobic003G206400 Sobic001G232700--Sobic003G206400 Sobic010G128400 Sobic010G128400 Sobic001G232700--Sobic010G128400 Sobic009G065800 Sobic009G065800 Sobic001G232700--Sobic009G065800 Sobic001G232700--Sobic002G301900 Sobic002G063600 Sobic002G063600 Sobic001G232700--Sobic002G063600 Sobic001G232700--Sobic010G045500 Sobic007G054900--Sobic010G009900 Sobic001G242000 Sobic001G242000 Sobic007G054900--Sobic001G242000 Sobic008G158600 Sobic008G158600 Sobic007G054900--Sobic008G158600 Sobic007G054900--Sobic004G292600 Sobic002G012300 Sobic002G012300 Sobic007G054900--Sobic002G012300 Sobic005G011900 Sobic005G011900 Sobic007G054900--Sobic005G011900 Sobic002G369400 Sobic002G369400 Sobic007G054900--Sobic002G369400 Sobic001G162233 Sobic001G162233 Sobic007G054900--Sobic001G162233 Sobic008G158501 Sobic008G158501 Sobic007G054900--Sobic008G158501 Sobic010G053200 Sobic010G053200 Sobic004G159500--Sobic010G053200 Sobic004G159500--Sobic001G414300 Sobic004G159500--Sobic008G184700 Sobic004G159500--Sobic003G143000 Sobic004G159500--Sobic002G391800 Sobic004G159500--Sobic001G232700 Sobic004G159500--Sobic007G054900 Sobic004G159500--Sobic001G539300 Sobic001G234900 Sobic001G234900 Sobic002G391800--Sobic001G234900 Sobic005G160700 Sobic005G160700 Sobic002G391800--Sobic005G160700 Sobic001G342400 Sobic001G342400 Sobic002G391800--Sobic001G342400 Sobic002G391800--Sobic001G242100 Sobic001G379400 Sobic001G379400 Sobic002G391800--Sobic001G379400 Sobic002G391800--Sobic001G232700 Sobic002G377600 Sobic002G377600 Sobic002G391800--Sobic002G377600 Sobic002G391800--Sobic005G222500 Sobic002G391800--Sobic010G045500 Sobic004G292600--Sobic001G539300 Sobic004G292600--Sobic001G162233 Sobic010G156400 Sobic010G156400 Sobic004G292600--Sobic010G156400 Sobic004G292600--Sobic005G011900 Sobic003G441500 Sobic003G441500 Sobic003G430500--Sobic003G441500 Sobic003G430500--Sobic010G045500 Sobic003G430500--Sobic008G128200 Sobic008G026000 Sobic008G026000 Sobic003G430500--Sobic008G026000 Sobic003G430500--Sobic006G234466 Sobic001G487600 Sobic001G487600 Sobic003G430500--Sobic001G487600 Sobic008G002800 Sobic008G002800 Sobic003G430500--Sobic008G002800 Sobic003G364200 Sobic003G364200 Sobic003G430500--Sobic003G364200 Sobic003G430500--Sobic003G143000 Sobic010G009900--Sobic007G054900 Sobic006G050800 Sobic006G050800 Sobic010G009900--Sobic006G050800 Sobic009G116600 Sobic009G116600 Sobic010G009900--Sobic009G116600 Sobic010G009900--Sobic001G242000 SobicK026900 SobicK026900 Sobic010G009900--SobicK026900 Sobic010G009900--Sobic010G045500 Sobic010G009900--Sobic002G369400 Sobic003G136200 Sobic003G136200 Sobic010G009900--Sobic003G136200 Sobic010G009900--Sobic002G012300
Octagon: transcription factors


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