Gene annotation
Transcriptome id Sobic.003G430500.1
Synonym Sb03g046220
Functional annotation OsCML23 - Calmodulin-related calcium sensor protein, expressed
UniProt C5XIH6
Pfam PF13833
Panther DB PTHR10891 PTHR10891:SF613
NCBI CDD -
KEGG Orthology K13448; calcium-binding protein CML
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76640 : Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os01g72530.1 : OsCML31 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK11607
Barley HORVU3Hr1G109230.1
Wheat TraesCS3D02G499800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G441500 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
2 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
3 Sobic.008G128200 - -
4 Sobic.008G026000 expressed protein -
5 Sobic.006G234466 - -
6 Sobic.001G487600 Lectin protein kinase family protein("PubMedID : 26759170,PubMedID : 24597475")@protein kinase domain containing protein, expressed -
7 Sobic.008G002800 fatty acid desaturase, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
8 Sobic.003G364200 glycosyl hydrolase, putative, expressed K01183: chitinase
9 Sobic.003G143000 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
10 Sobic.006G078900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -
11 Sobic.006G198000 expressed protein -
12 Sobic.004G165100 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@RCN2 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
13 Sobic.005G069800 OsWAK124 - OsWAK receptor-like protein OsWAK-RLP, expressed -
14 Sobic.001G242100 expressed protein -
15 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
16 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.005G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
19 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.004G180700 expressed protein -


Gene co-expression network
sample Sobic003G430500 Sobic003G430500 Sobic003G441500 Sobic003G441500 Sobic003G430500--Sobic003G441500 Sobic010G045500 Sobic010G045500 Sobic003G430500--Sobic010G045500 Sobic008G128200 Sobic008G128200 Sobic003G430500--Sobic008G128200 Sobic008G026000 Sobic008G026000 Sobic003G430500--Sobic008G026000 Sobic006G234466 Sobic006G234466 Sobic003G430500--Sobic006G234466 Sobic001G487600 Sobic001G487600 Sobic003G430500--Sobic001G487600 Sobic008G002800 Sobic008G002800 Sobic003G430500--Sobic008G002800 Sobic003G364200 Sobic003G364200 Sobic003G430500--Sobic003G364200 Sobic003G143000 Sobic003G143000 Sobic003G430500--Sobic003G143000 Sobic003G441500--Sobic003G430500 Sobic003G441500--Sobic001G487600 Sobic003G441500--Sobic008G128200 Sobic005G069800 Sobic005G069800 Sobic003G441500--Sobic005G069800 Sobic003G441500--Sobic010G045500 Sobic004G165100 Sobic004G165100 Sobic003G441500--Sobic004G165100 Sobic005G215400 Sobic005G215400 Sobic003G441500--Sobic005G215400 Sobic003G441500--Sobic008G026000 Sobic003G441500--Sobic006G234466 Sobic001G242100 Sobic001G242100 Sobic010G045500--Sobic001G242100 Sobic002G301900 Sobic002G301900 Sobic010G045500--Sobic002G301900 Sobic010G045500--Sobic006G234466 Sobic004G180700 Sobic004G180700 Sobic010G045500--Sobic004G180700 Sobic010G045500--Sobic005G215400 Sobic004G322800 Sobic004G322800 Sobic010G045500--Sobic004G322800 Sobic010G270700 Sobic010G270700 Sobic010G045500--Sobic010G270700 Sobic004G301600 Sobic004G301600 Sobic010G045500--Sobic004G301600 Sobic010G045500--Sobic008G128200 Sobic007G204700 Sobic007G204700 Sobic008G128200--Sobic007G204700 Sobic008G128066 Sobic008G128066 Sobic008G128200--Sobic008G128066 Sobic008G128200--Sobic010G045500 Sobic008G128200--Sobic003G364200 Sobic006G078900 Sobic006G078900 Sobic008G128200--Sobic006G078900 Sobic008G127933 Sobic008G127933 Sobic008G128200--Sobic008G127933 Sobic008G128200--Sobic005G215400 Sobic008G128200--Sobic005G069800 Sobic005G066100 Sobic005G066100 Sobic008G128200--Sobic005G066100 Sobic006G198000 Sobic006G198000 Sobic008G026000--Sobic006G198000 Sobic004G292600 Sobic004G292600 Sobic008G026000--Sobic004G292600 Sobic009G197100 Sobic009G197100 Sobic008G026000--Sobic009G197100 Sobic008G026000--Sobic004G165100 Sobic008G184700 Sobic008G184700 Sobic008G026000--Sobic008G184700 Sobic001G539300 Sobic001G539300 Sobic008G026000--Sobic001G539300 Sobic006G234466--Sobic010G045500 Sobic001G342400 Sobic001G342400 Sobic006G234466--Sobic001G342400 Sobic001G504100 Sobic001G504100 Sobic006G234466--Sobic001G504100 Sobic006G234466--Sobic002G301900 Sobic006G050800 Sobic006G050800 Sobic006G234466--Sobic006G050800 Sobic006G234466--Sobic010G270700 Sobic008G009400 Sobic008G009400 Sobic006G234466--Sobic008G009400 Sobic001G242000 Sobic001G242000 Sobic006G234466--Sobic001G242000 Sobic001G234900 Sobic001G234900 Sobic006G234466--Sobic001G234900 Sobic003G426600 Sobic003G426600 Sobic001G487600--Sobic003G426600 Sobic001G280800 Sobic001G280800 Sobic001G487600--Sobic001G280800 Sobic002G012500 Sobic002G012500 Sobic001G487600--Sobic002G012500 Sobic008G036800 Sobic008G036800 Sobic001G487600--Sobic008G036800 Sobic003G376100 Sobic003G376100 Sobic001G487600--Sobic003G376100 Sobic004G022900 Sobic004G022900 Sobic001G487600--Sobic004G022900 Sobic008G022000 Sobic008G022000 Sobic001G487600--Sobic008G022000 Sobic008G158600 Sobic008G158600 Sobic001G487600--Sobic008G158600 Sobic009G145600 Sobic009G145600 Sobic001G487600--Sobic009G145600 Sobic008G002800--Sobic010G045500 Sobic008G002800--Sobic001G242100 Sobic001G232700 Sobic001G232700 Sobic008G002800--Sobic001G232700 Sobic008G002800--Sobic002G301900 Sobic008G002800--Sobic006G234466 Sobic005G222500 Sobic005G222500 Sobic008G002800--Sobic005G222500 Sobic002G391800 Sobic002G391800 Sobic008G002800--Sobic002G391800 Sobic008G002800--Sobic004G180700 Sobic008G002800--Sobic004G301600 Sobic003G364200--Sobic008G128066 Sobic003G364200--Sobic008G128200 Sobic003G364200--Sobic007G204700 Sobic003G364200--Sobic005G215400 Sobic003G364200--Sobic010G045500 Sobic003G364200--Sobic004G322800 Sobic003G364200--Sobic008G127933 Sobic005G160700 Sobic005G160700 Sobic003G364200--Sobic005G160700 Sobic006G122800 Sobic006G122800 Sobic003G364200--Sobic006G122800 Sobic003G020400 Sobic003G020400 Sobic003G143000--Sobic003G020400 Sobic003G143000--Sobic010G045500 Sobic003G143000--Sobic001G232700 Sobic007G054900 Sobic007G054900 Sobic003G143000--Sobic007G054900 Sobic004G159500 Sobic004G159500 Sobic003G143000--Sobic004G159500 Sobic003G143000--Sobic002G391800 Sobic003G143000--Sobic004G292600 Sobic003G143000--Sobic003G430500 Sobic010G009900 Sobic010G009900 Sobic003G143000--Sobic010G009900
Octagon: transcription factors


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