Gene annotation
Transcriptome id Sobic.008G002800.1
Synonym Sb08g000430, FAD8
Functional annotation fatty acid desaturase, putative, expressed
UniProt A0A1B6PAW8 , A3F5L2
Pfam PF11960 PF00487
Panther DB PTHR32100 PTHR32100:SF14
NCBI CDD -
KEGG Orthology K10257; FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
Gene Ontology GO:0016717; oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT5G05580 : fatty acid desaturase 8
RAP-DB (Rice) LOC_Os12g01370.1 : fatty acid desaturase, putative, expressed
MaizeGDB (Corn) Zm00025a028922
Brachypodium KQJ92651
Barley HORVU4Hr1G024960.2 , HORVU3Hr1G026670.8 , HORVU3Hr1G026670.9 , HORVU3Hr1G026670.4 , HORVU3Hr1G026670.3 , HORVU3Hr1G026670.1 , HORVU5Hr1G048240.3 , HORVU5Hr1G048240.2 , HORVU5Hr1G048240.5 , HORVU5Hr1G048240.4 , HORVU5Hr1G048240.7 , HORVU5Hr1G048240.6 , HORVU5Hr1G048240.9 , HORVU5Hr1G048240.8 , HORVU3Hr1G026670.16 , HORVU3Hr1G026670.17 , HORVU3Hr1G026670.10 , HORVU3Hr1G026670.11 , HORVU3Hr1G026670.12 , HORVU3Hr1G026670.19 , HORVU3Hr1G026670.20 , HORVU3Hr1G026670.23 , HORVU3Hr1G026670.22 , HORVU5Hr1G048240.1
Wheat TraesCS5B02G153000 , TraesCS4A02G182700 , TraesCS4B02G135900 , TraesCS5A02G154800 , TraesCS5D02G159700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
2 Sobic.001G242100 expressed protein -
3 Sobic.001G232700 - -
4 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.006G234466 - -
6 Sobic.005G222500 phospholipase D, putative, expressed K01115: phospholipase D1/2
7 Sobic.002G391800 peroxidase, putative, expressed K00430: peroxidase
8 Sobic.004G180700 expressed protein -
9 Sobic.004G301600 integral membrane protein, putative, expressed -
10 Sobic.003G400900 keratin, type I cytoskeletal 9, putative, expressed -
11 Sobic.001G342400 SPX domain-3("PubMedID : 26759170,PubMedID : 24597475")@SPX domain-containing protein, putative, expressed -
12 Sobic.006G079300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.003G430500 OsCML23 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
14 Sobic.003G206400 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
15 Sobic.001G234900 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
16 Sobic.002G063600 disease resistance protein RPM1, putative -
17 Sobic.010G128400 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.005G160700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.004G322800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.007G158800 patatin, putative, expressed -


Gene co-expression network
sample Sobic008G002800 Sobic008G002800 Sobic010G045500 Sobic010G045500 Sobic008G002800--Sobic010G045500 Sobic001G242100 Sobic001G242100 Sobic008G002800--Sobic001G242100 Sobic001G232700 Sobic001G232700 Sobic008G002800--Sobic001G232700 Sobic002G301900 Sobic002G301900 Sobic008G002800--Sobic002G301900 Sobic006G234466 Sobic006G234466 Sobic008G002800--Sobic006G234466 Sobic005G222500 Sobic005G222500 Sobic008G002800--Sobic005G222500 Sobic002G391800 Sobic002G391800 Sobic008G002800--Sobic002G391800 Sobic004G180700 Sobic004G180700 Sobic008G002800--Sobic004G180700 Sobic004G301600 Sobic004G301600 Sobic008G002800--Sobic004G301600 Sobic010G045500--Sobic001G242100 Sobic010G045500--Sobic002G301900 Sobic010G045500--Sobic006G234466 Sobic010G045500--Sobic004G180700 Sobic005G215400 Sobic005G215400 Sobic010G045500--Sobic005G215400 Sobic004G322800 Sobic004G322800 Sobic010G045500--Sobic004G322800 Sobic010G270700 Sobic010G270700 Sobic010G045500--Sobic010G270700 Sobic010G045500--Sobic004G301600 Sobic008G128200 Sobic008G128200 Sobic010G045500--Sobic008G128200 Sobic001G242100--Sobic002G301900 Sobic001G242100--Sobic010G045500 Sobic006G079300 Sobic006G079300 Sobic001G242100--Sobic006G079300 Sobic003G400900 Sobic003G400900 Sobic001G242100--Sobic003G400900 Sobic001G242100--Sobic005G222500 Sobic001G502000 Sobic001G502000 Sobic001G242100--Sobic001G502000 Sobic001G242100--Sobic001G232700 Sobic001G242100--Sobic004G322800 Sobic005G160700 Sobic005G160700 Sobic001G242100--Sobic005G160700 Sobic001G232700--Sobic001G242100 Sobic001G232700--Sobic002G391800 Sobic001G232700--Sobic005G222500 Sobic003G206400 Sobic003G206400 Sobic001G232700--Sobic003G206400 Sobic010G128400 Sobic010G128400 Sobic001G232700--Sobic010G128400 Sobic009G065800 Sobic009G065800 Sobic001G232700--Sobic009G065800 Sobic001G232700--Sobic002G301900 Sobic002G063600 Sobic002G063600 Sobic001G232700--Sobic002G063600 Sobic001G232700--Sobic010G045500 Sobic002G301900--Sobic001G242100 Sobic002G301900--Sobic010G045500 Sobic002G301900--Sobic001G502000 Sobic006G170600 Sobic006G170600 Sobic002G301900--Sobic006G170600 Sobic002G301900--Sobic003G400900 Sobic002G301900--Sobic005G222500 Sobic004G299600 Sobic004G299600 Sobic002G301900--Sobic004G299600 Sobic002G183700 Sobic002G183700 Sobic002G301900--Sobic002G183700 Sobic002G301900--Sobic004G180700 Sobic006G234466--Sobic010G045500 Sobic001G342400 Sobic001G342400 Sobic006G234466--Sobic001G342400 Sobic001G504100 Sobic001G504100 Sobic006G234466--Sobic001G504100 Sobic006G234466--Sobic002G301900 Sobic006G050800 Sobic006G050800 Sobic006G234466--Sobic006G050800 Sobic006G234466--Sobic010G270700 Sobic008G009400 Sobic008G009400 Sobic006G234466--Sobic008G009400 Sobic001G242000 Sobic001G242000 Sobic006G234466--Sobic001G242000 Sobic001G234900 Sobic001G234900 Sobic006G234466--Sobic001G234900 Sobic005G222500--Sobic001G502000 Sobic007G158800 Sobic007G158800 Sobic005G222500--Sobic007G158800 Sobic001G261509 Sobic001G261509 Sobic005G222500--Sobic001G261509 Sobic005G222500--Sobic004G299600 Sobic005G222500--Sobic003G400900 Sobic005G222500--Sobic001G242100 Sobic005G222500--Sobic002G301900 Sobic005G222500--Sobic009G065800 Sobic007G158600 Sobic007G158600 Sobic005G222500--Sobic007G158600 Sobic002G391800--Sobic001G234900 Sobic002G391800--Sobic005G160700 Sobic002G391800--Sobic001G342400 Sobic002G391800--Sobic001G242100 Sobic001G379400 Sobic001G379400 Sobic002G391800--Sobic001G379400 Sobic002G391800--Sobic001G232700 Sobic002G377600 Sobic002G377600 Sobic002G391800--Sobic002G377600 Sobic002G391800--Sobic005G222500 Sobic002G391800--Sobic010G045500 Sobic004G180700--Sobic004G301600 Sobic002G105300 Sobic002G105300 Sobic004G180700--Sobic002G105300 Sobic006G202600 Sobic006G202600 Sobic004G180700--Sobic006G202600 Sobic004G180700--Sobic006G050800 Sobic004G180700--Sobic006G170600 Sobic010G196000 Sobic010G196000 Sobic004G180700--Sobic010G196000 Sobic004G295100 Sobic004G295100 Sobic004G180700--Sobic004G295100 Sobic004G180700--Sobic002G301900 Sobic005G163800 Sobic005G163800 Sobic004G180700--Sobic005G163800 Sobic004G301600--Sobic004G180700 Sobic004G301600--Sobic006G170600 Sobic004G301600--Sobic006G202600 Sobic004G301600--Sobic006G050800 Sobic004G301600--Sobic002G301900 Sobic004G301600--Sobic002G105300 Sobic007G090469 Sobic007G090469 Sobic004G301600--Sobic007G090469 Sobic004G301600--Sobic010G196000 Sobic004G301600--Sobic004G295100
Octagon: transcription factors


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