Gene annotation
Transcriptome id Sobic.001G342400.1
Synonym SPX3, ATSPX3, Sb01g032880
Functional annotation SPX domain-3( (PubMedID : 26759170,(PubMedID : 24597475)
SPX domain-containing protein, putative, expressed
UniProt C5WWP9
Pfam PF03105
Panther DB PTHR10783 PTHR10783:SF26
NCBI CDD KOG1161; Protein involved in vacuolar polyphosphate accumulation, contains SPX domain
KEGG Orthology -
Gene Ontology GO:0016036; cellular response to phosphate starvation


Orthologs (automatic annotation)
TAIR AT2G45130 : SPX domain gene 3
RAP-DB (Rice) LOC_Os03g29250.1 : SPX domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a007057 , Zm00025a002801
Brachypodium KQK15263 , KQK21334 , KQK21333 , PNT77265
Barley HORVU2Hr1G031400.4 , HORVU2Hr1G031400.5 , HORVU2Hr1G031400.1 , HORVU2Hr1G031400.2 , HORVU2Hr1G031400.3
Wheat TraesCS2A02G169600 , TraesCS2D02G177100 , TraesCS2B02G195900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G234900 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
2 Sobic.002G391800 peroxidase, putative, expressed K00430: peroxidase
3 Sobic.006G234466 - -
4 Sobic.001G504100 - -
5 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G183600 Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@SPX domain-containing protein, putative, expressed -
7 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
8 Sobic.010G147200 aluminum-activated malate transporter, putative, expressed -
9 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
10 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.005G160700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
12 Sobic.001G242100 expressed protein -
13 Sobic.008G009400 - -
14 Sobic.008G127933 - -
15 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
17 Sobic.005G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
18 Sobic.002G425000 VQ domain containing protein, putative, expressed -
19 Sobic.006G255400 glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
20 Sobic.003G337600 WRKY116, expressed -


Gene co-expression network
sample Sobic001G342400 Sobic001G342400 Sobic001G234900 Sobic001G234900 Sobic001G342400--Sobic001G234900 Sobic002G391800 Sobic002G391800 Sobic001G342400--Sobic002G391800 Sobic006G234466 Sobic006G234466 Sobic001G342400--Sobic006G234466 Sobic001G504100 Sobic001G504100 Sobic001G342400--Sobic001G504100 Sobic001G379400 Sobic001G379400 Sobic001G342400--Sobic001G379400 Sobic003G183600 Sobic003G183600 Sobic001G342400--Sobic003G183600 Sobic006G089000 Sobic006G089000 Sobic001G342400--Sobic006G089000 Sobic010G147200 Sobic010G147200 Sobic001G342400--Sobic010G147200 Sobic010G045500 Sobic010G045500 Sobic001G342400--Sobic010G045500 Sobic001G234900--Sobic001G342400 Sobic001G234900--Sobic001G379400 Sobic001G234900--Sobic002G391800 Sobic001G234900--Sobic010G147200 Sobic001G234900--Sobic006G089000 Sobic001G234900--Sobic003G183600 Sobic005G160700 Sobic005G160700 Sobic001G234900--Sobic005G160700 Sobic001G242100 Sobic001G242100 Sobic001G234900--Sobic001G242100 Sobic001G502000 Sobic001G502000 Sobic001G234900--Sobic001G502000 Sobic002G391800--Sobic001G234900 Sobic002G391800--Sobic005G160700 Sobic002G391800--Sobic001G342400 Sobic002G391800--Sobic001G242100 Sobic002G391800--Sobic001G379400 Sobic001G232700 Sobic001G232700 Sobic002G391800--Sobic001G232700 Sobic002G377600 Sobic002G377600 Sobic002G391800--Sobic002G377600 Sobic005G222500 Sobic005G222500 Sobic002G391800--Sobic005G222500 Sobic002G391800--Sobic010G045500 Sobic006G234466--Sobic010G045500 Sobic006G234466--Sobic001G342400 Sobic006G234466--Sobic001G504100 Sobic002G301900 Sobic002G301900 Sobic006G234466--Sobic002G301900 Sobic006G050800 Sobic006G050800 Sobic006G234466--Sobic006G050800 Sobic010G270700 Sobic010G270700 Sobic006G234466--Sobic010G270700 Sobic008G009400 Sobic008G009400 Sobic006G234466--Sobic008G009400 Sobic001G242000 Sobic001G242000 Sobic006G234466--Sobic001G242000 Sobic006G234466--Sobic001G234900 Sobic001G504100--Sobic001G342400 Sobic001G504100--Sobic006G234466 Sobic001G504100--Sobic001G234900 Sobic001G504100--Sobic002G391800 Sobic001G504100--Sobic005G222500 Sobic010G211400 Sobic010G211400 Sobic001G504100--Sobic010G211400 Sobic001G504100--Sobic002G301900 Sobic001G504100--Sobic010G270700 Sobic001G504100--Sobic006G089000 Sobic001G379400--Sobic006G089000 Sobic001G379400--Sobic010G147200 Sobic001G379400--Sobic005G160700 Sobic006G277700 Sobic006G277700 Sobic001G379400--Sobic006G277700 Sobic006G079300 Sobic006G079300 Sobic001G379400--Sobic006G079300 Sobic001G379400--Sobic001G234900 Sobic003G337600 Sobic003G337600 Sobic001G379400--Sobic003G337600 Sobic006G174300 Sobic006G174300 Sobic001G379400--Sobic006G174300 Sobic006G003100 Sobic006G003100 Sobic001G379400--Sobic006G003100 Sobic003G183600--Sobic001G342400 Sobic003G183600--Sobic001G234900 Sobic003G183600--Sobic001G379400 Sobic002G101400 Sobic002G101400 Sobic003G183600--Sobic002G101400 Sobic006G251400 Sobic006G251400 Sobic003G183600--Sobic006G251400 Sobic004G322800 Sobic004G322800 Sobic003G183600--Sobic004G322800 Sobic003G183600--Sobic010G147200 Sobic006G122800 Sobic006G122800 Sobic003G183600--Sobic006G122800 Sobic003G053600 Sobic003G053600 Sobic003G183600--Sobic003G053600 Sobic007G158800 Sobic007G158800 Sobic006G089000--Sobic007G158800 Sobic006G089000--Sobic001G502000 Sobic002G183700 Sobic002G183700 Sobic006G089000--Sobic002G183700 Sobic006G089000--Sobic001G379400 Sobic001G261509 Sobic001G261509 Sobic006G089000--Sobic001G261509 Sobic004G297900 Sobic004G297900 Sobic006G089000--Sobic004G297900 Sobic001G229000 Sobic001G229000 Sobic006G089000--Sobic001G229000 Sobic004G322100 Sobic004G322100 Sobic006G089000--Sobic004G322100 Sobic001G238300 Sobic001G238300 Sobic006G089000--Sobic001G238300 Sobic010G147200--Sobic001G379400 Sobic001G014700 Sobic001G014700 Sobic010G147200--Sobic001G014700 Sobic010G147200--Sobic006G003100 Sobic010G147200--Sobic006G089000 Sobic010G147200--Sobic006G277700 Sobic010G147200--Sobic001G502000 Sobic010G147200--Sobic006G174300 Sobic010G147200--Sobic001G234900 Sobic010G031700 Sobic010G031700 Sobic010G147200--Sobic010G031700 Sobic010G045500--Sobic001G242100 Sobic010G045500--Sobic002G301900 Sobic010G045500--Sobic006G234466 Sobic004G180700 Sobic004G180700 Sobic010G045500--Sobic004G180700 Sobic005G215400 Sobic005G215400 Sobic010G045500--Sobic005G215400 Sobic010G045500--Sobic004G322800 Sobic010G045500--Sobic010G270700 Sobic004G301600 Sobic004G301600 Sobic010G045500--Sobic004G301600 Sobic008G128200 Sobic008G128200 Sobic010G045500--Sobic008G128200
Octagon: transcription factors


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